RNA–Protein interactions for RNA: ENST00000374217.6

UBXN11-204, Transcript of UBX domain protein 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UBXN11, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-204ENST00000374217 COPS3Q9UNS2 423 aa13.74□□□□□ -0.21
UBXN11-204ENST00000374217 RCE1Q9Y256 329 aa13.74□□□□□ -0.21
UBXN11-204ENST00000374217 MRPS7Q9Y2R9 242 aaKnown RBP13.74□□□□□ -0.21
UBXN11-204ENST00000374217 A0A1B0GVC2 190 aa13.74□□□□□ -0.21
UBXN11-204ENST00000374217 UNC119BA6NIH7 251 aa13.74□□□□□ -0.21
UBXN11-204ENST00000374217 A6NIN4 97 aa13.74□□□□□ -0.21
UBXN11-204ENST00000374217 BHLHE40O14503 412 aa13.74□□□□□ -0.21
UBXN11-204ENST00000374217 SIGLEC6O43699 453 aa13.74□□□□□ -0.21
UBXN11-204ENST00000374217 NDUFB6O95139 128 aa13.74□□□□□ -0.21
UBXN11-204ENST00000374217 RCBTB2O95199 551 aa13.74□□□□□ -0.21
UBXN11-204ENST00000374217 CER1O95813 267 aa13.74□□□□□ -0.21
UBXN11-204ENST00000374217 AGR2O95994 175 aa13.74□□□□□ -0.21
UBXN11-204ENST00000374217 HPP00738 406 aa13.74□□□□□ -0.21
UBXN11-204ENST00000374217 SBK2P0C263 348 aa13.74□□□□□ -0.21
UBXN11-204ENST00000374217 BMP7P18075 431 aa13.74□□□□□ -0.21
UBXN11-204ENST00000374217 FAUP35544 74 aaKnown RBP13.74□□□□□ -0.21
UBXN11-204ENST00000374217 RGS8P57771 180 aaPredicted RBP13.74□□□□□ -0.21
UBXN11-204ENST00000374217 SLC3A1Q07837 685 aa13.74□□□□□ -0.21
UBXN11-204ENST00000374217 TGM3Q08188 693 aa13.74□□□□□ -0.21
UBXN11-204ENST00000374217 GDF7Q7Z4P5 450 aa13.74□□□□□ -0.21
UBXN11-204ENST00000374217 TMEM17Q86X19 198 aa13.74□□□□□ -0.21
UBXN11-204ENST00000374217 ARL14Q8N4G2 192 aa13.74□□□□□ -0.21
UBXN11-204ENST00000374217 COQ8AQ8NI60 647 aa13.74□□□□□ -0.21
UBXN11-204ENST00000374217 ATOH1Q92858 354 aaPredicted RBP13.74□□□□□ -0.21
UBXN11-204ENST00000374217 MRPL48Q96GC5 212 aaKnown RBP13.74□□□□□ -0.21
UBXN11-204ENST00000374217 SAMD8Q96LT4 415 aa13.74□□□□□ -0.21
UBXN11-204ENST00000374217 NPAS1Q99742 590 aa13.74□□□□□ -0.21
UBXN11-204ENST00000374217 SLC38A1Q9H2H9 487 aa13.74□□□□□ -0.21
UBXN11-204ENST00000374217 CACYBPQ9HB71 228 aaKnown RBP13.74□□□□□ -0.21
UBXN11-204ENST00000374217 CAPN10Q9HC96 672 aa13.74□□□□□ -0.21
UBXN11-204ENST00000374217 NRIP3Q9NQ35 241 aa13.74□□□□□ -0.21
UBXN11-204ENST00000374217 HPF1Q9NWY4 346 aa13.74□□□□□ -0.21
UBXN11-204ENST00000374217 PCDHGA5Q9Y5G8 931 aa13.74□□□□□ -0.21
UBXN11-204ENST00000374217 A0A0A6YYD5 115 aa13.73□□□□□ -0.21
UBXN11-204ENST00000374217 DNASE2O00115 360 aaPredicted RBP13.73□□□□□ -0.21
UBXN11-204ENST00000374217 ARPC1BO15143 372 aaKnown RBP13.73□□□□□ -0.21
UBXN11-204ENST00000374217 GPRIN2O60269 458 aa13.73□□□□□ -0.21
UBXN11-204ENST00000374217 GMDSO60547 372 aa13.73□□□□□ -0.21
UBXN11-204ENST00000374217 KHDRBS3O75525 346 aaKnown RBP13.73□□□□□ -0.21
UBXN11-204ENST00000374217 SNRPBP14678 240 aaKnown RBP13.73□□□□□ -0.21
UBXN11-204ENST00000374217 RPA2P15927 270 aa13.73□□□□□ -0.21
UBXN11-204ENST00000374217 ATP5A1P25705 553 aaKnown RBP13.73□□□□□ -0.21
UBXN11-204ENST00000374217 EPHA8P29322 1005 aaPredicted RBP13.73□□□□□ -0.21
UBXN11-204ENST00000374217 RORAP35398 523 aa13.73□□□□□ -0.21
UBXN11-204ENST00000374217 GPR4P46093 362 aa13.73□□□□□ -0.21
UBXN11-204ENST00000374217 NCBP2P52298 156 aaKnown RBP eCLIP13.73□□□□□ -0.21
UBXN11-204ENST00000374217 MAZP56270 477 aaKnown RBP13.73□□□□□ -0.21
UBXN11-204ENST00000374217 FGL1Q08830 312 aa13.73□□□□□ -0.21
UBXN11-204ENST00000374217 TMEM35AQ53FP2 167 aa13.73□□□□□ -0.21
UBXN11-204ENST00000374217 FAM27D1Q5T7N8 215 aa13.73□□□□□ -0.21
UBXN11-204ENST00000374217 SLC25A25Q6KCM7 469 aa13.73□□□□□ -0.21
UBXN11-204ENST00000374217 LINGO2Q7L985 606 aa13.73□□□□□ -0.21
UBXN11-204ENST00000374217 SZRD1Q7Z422 152 aa13.73□□□□□ -0.21
UBXN11-204ENST00000374217 CCDC36Q8IYA8 594 aa13.73□□□□□ -0.21
UBXN11-204ENST00000374217 SLC25A45Q8N413 288 aa13.73□□□□□ -0.21
UBXN11-204ENST00000374217 LINC01555Q8NAE3 123 aa13.73□□□□□ -0.21
UBXN11-204ENST00000374217 OR10G6Q8NH81 332 aa13.73□□□□□ -0.21
UBXN11-204ENST00000374217 ZNF671Q8TAW3 534 aa13.73□□□□□ -0.21
UBXN11-204ENST00000374217 FANK1Q8TC84 345 aa13.73□□□□□ -0.21
UBXN11-204ENST00000374217 SMAP2Q8WU79 429 aaPredicted RBP13.73□□□□□ -0.21
UBXN11-204ENST00000374217 GHSRQ92847 366 aa13.73□□□□□ -0.21
UBXN11-204ENST00000374217 SLC22A18Q96BI1 424 aa13.73□□□□□ -0.21
UBXN11-204ENST00000374217 SMIM19Q96E16 107 aa13.73□□□□□ -0.21
UBXN11-204ENST00000374217 C4orf36Q96KX1 117 aa13.73□□□□□ -0.21
UBXN11-204ENST00000374217 F2RL3Q96RI0 385 aa13.73□□□□□ -0.21
UBXN11-204ENST00000374217 BBS4Q96RK4 519 aa13.73□□□□□ -0.21
UBXN11-204ENST00000374217 SLC38A3Q99624 504 aa13.73□□□□□ -0.21
UBXN11-204ENST00000374217 UQCC2Q9BRT2 126 aa13.73□□□□□ -0.21
UBXN11-204ENST00000374217 LRFN3Q9BTN0 628 aa13.73□□□□□ -0.21
UBXN11-204ENST00000374217 DPH7Q9BTV6 452 aa13.73□□□□□ -0.21
UBXN11-204ENST00000374217 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.73□□□□□ -0.21
UBXN11-204ENST00000374217 OR52D1Q9H346 318 aa13.73□□□□□ -0.21
UBXN11-204ENST00000374217 LHX9Q9NQ69 397 aa13.73□□□□□ -0.21
UBXN11-204ENST00000374217 NKIRAS2Q9NYR9 191 aa13.73□□□□□ -0.21
UBXN11-204ENST00000374217 ZNF69Q9UC07 566 aa13.73□□□□□ -0.21
UBXN11-204ENST00000374217 OPN4Q9UHM6 478 aa13.73□□□□□ -0.21
UBXN11-204ENST00000374217 ST6GALNAC2Q9UJ37 374 aa13.73□□□□□ -0.21
UBXN11-204ENST00000374217 PURGQ9UJV8 347 aaKnown RBP13.73□□□□□ -0.21
UBXN11-204ENST00000374217 ZMIZ1Q9ULJ6 1067 aa13.73□□□□□ -0.21
UBXN11-204ENST00000374217 USP34Q70CQ2 3546 aa13.73□□□□□ -0.21
UBXN11-204ENST00000374217 ANXA2P2A6NMY6 339 aa13.72□□□□□ -0.21
UBXN11-204ENST00000374217 ACOT7O00154 380 aa13.72□□□□□ -0.21
UBXN11-204ENST00000374217 EMC8O43402 210 aa13.72□□□□□ -0.21
UBXN11-204ENST00000374217 TMPRSS11DO60235 418 aa13.72□□□□□ -0.21
UBXN11-204ENST00000374217 CLEC3AO75596 197 aa13.72□□□□□ -0.21
UBXN11-204ENST00000374217 SLC2A10O95528 541 aa13.72□□□□□ -0.21
UBXN11-204ENST00000374217 HMGN2P05204 90 aaKnown RBP13.72□□□□□ -0.21
UBXN11-204ENST00000374217 UBBP0CG47 229 aa13.72□□□□□ -0.21
UBXN11-204ENST00000374217 UBCP0CG48 685 aaKnown RBP13.72□□□□□ -0.21
UBXN11-204ENST00000374217 AHRP35869 848 aa13.72□□□□□ -0.21
UBXN11-204ENST00000374217 RPS27AP62979 156 aaKnown RBP13.72□□□□□ -0.21
UBXN11-204ENST00000374217 UBA52P62987 128 aaKnown RBP13.72□□□□□ -0.21
UBXN11-204ENST00000374217 E2F1Q01094 437 aa13.72□□□□□ -0.21
UBXN11-204ENST00000374217 C14orf28Q4W4Y0 310 aa13.72□□□□□ -0.21
UBXN11-204ENST00000374217 EIPR1Q53HC9 387 aa13.72□□□□□ -0.21
UBXN11-204ENST00000374217 CCDC157Q569K6 752 aa13.72□□□□□ -0.21
UBXN11-204ENST00000374217 C6orf132Q5T0Z8 1188 aa13.72□□□□□ -0.21
UBXN11-204ENST00000374217 ARMC6Q6NXE6 501 aa13.72□□□□□ -0.21
UBXN11-204ENST00000374217 FAM180BQ6P0A1 224 aa13.72□□□□□ -0.21
UBXN11-204ENST00000374217 NKAIN4Q8IVV8 208 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms