RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 SRSF4Q08170 494 aaKnown RBP11.86□□□□□ -0.51
PRPF4-201ENST00000374198 ALKBH1Q13686 389 aaKnown RBP11.86□□□□□ -0.51
PRPF4-201ENST00000374198 VWA2Q5GFL6 755 aa11.86□□□□□ -0.51
PRPF4-201ENST00000374198 NKAPLQ5M9Q1 402 aa11.86□□□□□ -0.51
PRPF4-201ENST00000374198 UNQ9370/PRO34162Q6UXP9 181 aa11.86□□□□□ -0.51
PRPF4-201ENST00000374198 POMGNT2Q8NAT1 580 aa11.86□□□□□ -0.51
PRPF4-201ENST00000374198 TMEM255BQ8WV15 326 aa11.86□□□□□ -0.51
PRPF4-201ENST00000374198 RNF141Q8WVD5 230 aa11.86□□□□□ -0.51
PRPF4-201ENST00000374198 MIB2Q96AX9 1013 aa11.86□□□□□ -0.51
PRPF4-201ENST00000374198 PPP1R16AQ96I34 528 aa11.86□□□□□ -0.51
PRPF4-201ENST00000374198 ARHGDIGQ99819 225 aa11.86□□□□□ -0.51
PRPF4-201ENST00000374198 RSRP1Q9BUV0 290 aa11.86□□□□□ -0.51
PRPF4-201ENST00000374198 TTTY10Q9BZA0 68 aa11.86□□□□□ -0.51
PRPF4-201ENST00000374198 OR52D1Q9H346 318 aa11.86□□□□□ -0.51
PRPF4-201ENST00000374198 POFUT1Q9H488 388 aa11.86□□□□□ -0.51
PRPF4-201ENST00000374198 CWH43Q9H720 699 aa11.86□□□□□ -0.51
PRPF4-201ENST00000374198 TMEM27Q9HBJ8 222 aa11.86□□□□□ -0.51
PRPF4-201ENST00000374198 TAS2R8Q9NYW2 309 aa11.86□□□□□ -0.51
PRPF4-201ENST00000374198 SLC13A4Q9UKG4 626 aa11.86□□□□□ -0.51
PRPF4-201ENST00000374198 FAM96BQ9Y3D0 163 aa11.86□□□□□ -0.51
PRPF4-201ENST00000374198 RANBP2P49792 3224 aaKnown RBP11.85□□□□□ -0.51
PRPF4-201ENST00000374198 A0A1B0GTI1 187 aa11.85□□□□□ -0.51
PRPF4-201ENST00000374198 MCIDASD6RGH6 385 aa11.85□□□□□ -0.51
PRPF4-201ENST00000374198 SULT2B1O00204 365 aa11.85□□□□□ -0.51
PRPF4-201ENST00000374198 PIN1P1O15428 100 aa11.85□□□□□ -0.51
PRPF4-201ENST00000374198 SLC31A2O15432 143 aa11.85□□□□□ -0.51
PRPF4-201ENST00000374198 TBX19O60806 448 aa11.85□□□□□ -0.51
PRPF4-201ENST00000374198 GLSO94925 669 aaPredicted RBP11.85□□□□□ -0.51
PRPF4-201ENST00000374198 PPP1R3DO95685 299 aa11.85□□□□□ -0.51
PRPF4-201ENST00000374198 CSF1P09603 554 aa11.85□□□□□ -0.51
PRPF4-201ENST00000374198 OR4E1P0C645 316 aa11.85□□□□□ -0.51
PRPF4-201ENST00000374198 IL9P15248 144 aa11.85□□□□□ -0.51
PRPF4-201ENST00000374198 EPCAMP16422 314 aa11.85□□□□□ -0.51
PRPF4-201ENST00000374198 TBPL1P62380 186 aa11.85□□□□□ -0.51
PRPF4-201ENST00000374198 FUT5Q11128 374 aa11.85□□□□□ -0.51
PRPF4-201ENST00000374198 ZNF234Q14588 700 aa11.85□□□□□ -0.51
PRPF4-201ENST00000374198 ENPP7Q6UWV6 458 aa11.85□□□□□ -0.51
PRPF4-201ENST00000374198 OR5M8Q8NGP6 311 aa11.85□□□□□ -0.51
PRPF4-201ENST00000374198 EDAQ92838 391 aa11.85□□□□□ -0.51
PRPF4-201ENST00000374198 TM4SF18Q96CE8 201 aa11.85□□□□□ -0.51
PRPF4-201ENST00000374198 TOLLIPQ9H0E2 274 aa11.85□□□□□ -0.51
PRPF4-201ENST00000374198 XKR8Q9H6D3 395 aa11.85□□□□□ -0.51
PRPF4-201ENST00000374198 SEC61A2Q9H9S3 476 aa11.85□□□□□ -0.51
PRPF4-201ENST00000374198 NTNG1Q9Y2I2 539 aa11.85□□□□□ -0.51
PRPF4-201ENST00000374198 DYRK1BQ9Y463 629 aa11.85□□□□□ -0.51
PRPF4-201ENST00000374198 V9GY05 133 aa11.85□□□□□ -0.51
PRPF4-201ENST00000374198 AP4M1O00189 453 aa11.85□□□□□ -0.51
PRPF4-201ENST00000374198 BHLHE40O14503 412 aa11.85□□□□□ -0.51
PRPF4-201ENST00000374198 TERTO14746 1132 aaKnown RBP11.85□□□□□ -0.51
PRPF4-201ENST00000374198 MAGEB4O15481 346 aaPredicted RBP11.85□□□□□ -0.51
PRPF4-201ENST00000374198 OIP5O43482 229 aa11.85□□□□□ -0.51
PRPF4-201ENST00000374198 SOCS5O75159 536 aa11.85□□□□□ -0.51
PRPF4-201ENST00000374198 PTNP21246 168 aa11.85□□□□□ -0.51
PRPF4-201ENST00000374198 PMELP40967 661 aa11.85□□□□□ -0.51
PRPF4-201ENST00000374198 ILF3Q12906 894 aaKnown RBP eCLIP11.85□□□□□ -0.51
PRPF4-201ENST00000374198 RPL13AP3Q6NVV1 102 aa11.85□□□□□ -0.51
PRPF4-201ENST00000374198 TPRG1Q6ZUI0 275 aa11.85□□□□□ -0.51
PRPF4-201ENST00000374198 SLC43A2Q8N370 569 aa11.85□□□□□ -0.51
PRPF4-201ENST00000374198 ZNF740Q8NDX6 193 aa11.85□□□□□ -0.51
PRPF4-201ENST00000374198 OR5AP2Q8NGF4 316 aa11.85□□□□□ -0.51
PRPF4-201ENST00000374198 CCDC107Q8WV48 283 aa11.85□□□□□ -0.51
PRPF4-201ENST00000374198 RAB7BQ96AH8 199 aa11.85□□□□□ -0.51
PRPF4-201ENST00000374198 PELI1Q96FA3 418 aa11.85□□□□□ -0.51
PRPF4-201ENST00000374198 LYSMD1Q96S90 227 aa11.85□□□□□ -0.51
PRPF4-201ENST00000374198 MRI1Q9BV20 369 aa11.85□□□□□ -0.51
PRPF4-201ENST00000374198 ZCCHC2Q9C0B9 1178 aaKnown RBP11.85□□□□□ -0.51
PRPF4-201ENST00000374198 LAT2Q9GZY6 243 aa11.85□□□□□ -0.51
PRPF4-201ENST00000374198 SCN5AQ14524 2016 aa11.85□□□□□ -0.51
PRPF4-201ENST00000374198 DOCK6Q96HP0 2047 aa11.85□□□□□ -0.51
PRPF4-201ENST00000374198 TRBV2A0A0J9YWF9 115 aa11.84□□□□□ -0.51
PRPF4-201ENST00000374198 MAN2B1O00754 1011 aa11.84□□□□□ -0.51
PRPF4-201ENST00000374198 TMEM127O75204 238 aa11.84□□□□□ -0.51
PRPF4-201ENST00000374198 THY1P04216 161 aa11.84□□□□□ -0.51
PRPF4-201ENST00000374198 CALCBP10092 127 aa11.84□□□□□ -0.51
PRPF4-201ENST00000374198 CPT2P23786 658 aa11.84□□□□□ -0.51
PRPF4-201ENST00000374198 ITPKBP27987 946 aa11.84□□□□□ -0.51
PRPF4-201ENST00000374198 AVPR2P30518 371 aa11.84□□□□□ -0.51
PRPF4-201ENST00000374198 CORO1AP31146 461 aaKnown RBP11.84□□□□□ -0.51
PRPF4-201ENST00000374198 TAS2R60P59551 318 aa11.84□□□□□ -0.51
PRPF4-201ENST00000374198 ACTC1P68032 377 aa11.84□□□□□ -0.51
PRPF4-201ENST00000374198 ACTA1P68133 377 aa11.84□□□□□ -0.51
PRPF4-201ENST00000374198 SIRPAP78324 504 aa11.84□□□□□ -0.51
PRPF4-201ENST00000374198 DPPA4Q7L190 304 aa11.84□□□□□ -0.51
PRPF4-201ENST00000374198 GDF7Q7Z4P5 450 aa11.84□□□□□ -0.51
PRPF4-201ENST00000374198 RFLNBQ8N5W9 214 aa11.84□□□□□ -0.51
PRPF4-201ENST00000374198 SDR9C7Q8NEX9 313 aa11.84□□□□□ -0.51
PRPF4-201ENST00000374198 OR52L1Q8NGH7 329 aa11.84□□□□□ -0.51
PRPF4-201ENST00000374198 ZNF480Q8WV37 535 aa11.84□□□□□ -0.51
PRPF4-201ENST00000374198 PHYHIPQ92561 330 aa11.84□□□□□ -0.51
PRPF4-201ENST00000374198 CPNE4Q96A23 557 aaPredicted RBP11.84□□□□□ -0.51
PRPF4-201ENST00000374198 PDCD1LG2Q9BQ51 273 aa11.84□□□□□ -0.51
PRPF4-201ENST00000374198 SFXN1Q9H9B4 322 aa11.84□□□□□ -0.51
PRPF4-201ENST00000374198 ASH2LQ9UBL3 628 aa11.84□□□□□ -0.51
PRPF4-201ENST00000374198 A0A1B0GWJ7 208 aa11.84□□□□□ -0.51
PRPF4-201ENST00000374198 OR2AG2A6NM03 316 aa11.84□□□□□ -0.51
PRPF4-201ENST00000374198 H7BY64 318 aa11.84□□□□□ -0.51
PRPF4-201ENST00000374198 TMIGD3P0DMS9 266 aaPredicted RBP11.84□□□□□ -0.51
PRPF4-201ENST00000374198 CLUP10909 449 aa11.84□□□□□ -0.51
PRPF4-201ENST00000374198 NDUFB7P17568 137 aa11.84□□□□□ -0.51
PRPF4-201ENST00000374198 KHKP50053 298 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms