RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 TAS2R10Q9NYW0 307 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 ACTR10Q9NZ32 417 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 ACSL5Q9ULC5 683 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 PRELID3BQ9Y3B1 194 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 FAM96BQ9Y3D0 163 aa4.97□□□□□ -1.61
ATG4A-204ENST00000372246 ATG2BQ96BY7 2078 aa4.96□□□□□ -1.61
ATG4A-204ENST00000372246 A0A1W2PPV9 198 aa4.96□□□□□ -1.61
ATG4A-204ENST00000372246 ABCD4O14678 606 aa4.96□□□□□ -1.61
ATG4A-204ENST00000372246 CREBL2O60519 120 aaPredicted RBP4.96□□□□□ -1.61
ATG4A-204ENST00000372246 LDB3O75112 727 aa4.96□□□□□ -1.61
ATG4A-204ENST00000372246 DKK1O94907 266 aa4.96□□□□□ -1.61
ATG4A-204ENST00000372246 CD3DP04234 171 aa4.96□□□□□ -1.61
ATG4A-204ENST00000372246 CELA2BP08218 269 aaPredicted RBP4.96□□□□□ -1.61
ATG4A-204ENST00000372246 OR8G3PP0DMU2 310 aa4.96□□□□□ -1.61
ATG4A-204ENST00000372246 HIST1H1CP16403 213 aaKnown RBP4.96□□□□□ -1.61
ATG4A-204ENST00000372246 SYN1P17600 705 aa4.96□□□□□ -1.61
ATG4A-204ENST00000372246 SRMP19623 302 aa4.96□□□□□ -1.61
ATG4A-204ENST00000372246 RAB3AP20336 220 aa4.96□□□□□ -1.61
ATG4A-204ENST00000372246 NT5EP21589 574 aa4.96□□□□□ -1.61
ATG4A-204ENST00000372246 DPP4P27487 766 aa4.96□□□□□ -1.61
ATG4A-204ENST00000372246 ACADLP28330 430 aa4.96□□□□□ -1.61
ATG4A-204ENST00000372246 RECQLP46063 649 aaPredicted RBP4.96□□□□□ -1.61
ATG4A-204ENST00000372246 EXOSC7Q15024 291 aaKnown RBP4.96□□□□□ -1.61
ATG4A-204ENST00000372246 DUSP5Q16690 384 aa4.96□□□□□ -1.61
ATG4A-204ENST00000372246 NDUFA9Q16795 377 aa4.96□□□□□ -1.61
ATG4A-204ENST00000372246 PLEKHN1Q494U1 663 aaPredicted RBP4.96□□□□□ -1.61
ATG4A-204ENST00000372246 ZNF658BQ4V348 819 aaPredicted RBP4.96□□□□□ -1.61
ATG4A-204ENST00000372246 DMRTC1Q5HYR2 192 aa4.96□□□□□ -1.61
ATG4A-204ENST00000372246 EXOSC6Q5RKV6 272 aaKnown RBP4.96□□□□□ -1.61
ATG4A-204ENST00000372246 CDCP2Q5VXM1 449 aa4.96□□□□□ -1.61
ATG4A-204ENST00000372246 ZNF626Q68DY1 528 aa4.96□□□□□ -1.61
ATG4A-204ENST00000372246 OR10K2Q6IF99 312 aa4.96□□□□□ -1.61
ATG4A-204ENST00000372246 ZNF783Q6ZMS7 281 aa4.96□□□□□ -1.61
ATG4A-204ENST00000372246 FRRS1Q6ZNA5 592 aa4.96□□□□□ -1.61
ATG4A-204ENST00000372246 TMPPEQ6ZT21 453 aa4.96□□□□□ -1.61
ATG4A-204ENST00000372246 MBOAT2Q6ZWT7 520 aa4.96□□□□□ -1.61
ATG4A-204ENST00000372246 C12orf40Q86WS4 652 aa4.96□□□□□ -1.61
ATG4A-204ENST00000372246 NUDT13Q86X67 352 aa4.96□□□□□ -1.61
ATG4A-204ENST00000372246 SLITRK4Q8IW52 837 aa4.96□□□□□ -1.61
ATG4A-204ENST00000372246 TRAM1L1Q8N609 369 aa4.96□□□□□ -1.61
ATG4A-204ENST00000372246 FAM98AQ8NCA5 519 aaKnown RBP4.96□□□□□ -1.61
ATG4A-204ENST00000372246 ZCCHC10Q8TBK6 192 aa4.96□□□□□ -1.61
ATG4A-204ENST00000372246 SNX33Q8WV41 574 aa4.96□□□□□ -1.61
ATG4A-204ENST00000372246 TNFAIP8L1Q8WVP5 186 aa4.96□□□□□ -1.61
ATG4A-204ENST00000372246 ROBO4Q8WZ75 1007 aa4.96□□□□□ -1.61
ATG4A-204ENST00000372246 ZNF689Q96CS4 500 aaPredicted RBP4.96□□□□□ -1.61
ATG4A-204ENST00000372246 LMLNQ96KR4 655 aa4.96□□□□□ -1.61
ATG4A-204ENST00000372246 C7orf50Q9BRJ6 194 aaKnown RBP4.96□□□□□ -1.61
ATG4A-204ENST00000372246 JAM3Q9BX67 310 aa4.96□□□□□ -1.61
ATG4A-204ENST00000372246 ACTR6Q9GZN1 396 aa4.96□□□□□ -1.61
ATG4A-204ENST00000372246 ADAP2Q9NPF8 381 aa4.96□□□□□ -1.61
ATG4A-204ENST00000372246 SPHK1Q9NYA1 384 aa4.96□□□□□ -1.61
ATG4A-204ENST00000372246 SLC25A13Q9UJS0 675 aa4.96□□□□□ -1.61
ATG4A-204ENST00000372246 FOXJ3Q9UPW0 622 aa4.96□□□□□ -1.61
ATG4A-204ENST00000372246 CAMK2AQ9UQM7 478 aa4.96□□□□□ -1.61
ATG4A-204ENST00000372246 KCNK6Q9Y257 313 aa4.96□□□□□ -1.61
ATG4A-204ENST00000372246 KLHDC2Q9Y2U9 406 aa4.96□□□□□ -1.61
ATG4A-204ENST00000372246 INSL5Q9Y5Q6 135 aa4.96□□□□□ -1.61
ATG4A-204ENST00000372246 COL4A6Q14031 1691 aa4.96□□□□□ -1.62
ATG4A-204ENST00000372246 ANAPC1Q9H1A4 1944 aa4.96□□□□□ -1.62
ATG4A-204ENST00000372246 GON4LQ3T8J9 2241 aa4.96□□□□□ -1.62
ATG4A-204ENST00000372246 A0A0A6YYC8 382 aaPredicted RBP4.96□□□□□ -1.62
ATG4A-204ENST00000372246 A0A0A6YYD5 115 aa4.96□□□□□ -1.62
ATG4A-204ENST00000372246 LRIT2A6NDA9 550 aa4.96□□□□□ -1.62
ATG4A-204ENST00000372246 IFITM5A6NNB3 132 aa4.96□□□□□ -1.62
ATG4A-204ENST00000372246 METTL12A8MUP2 240 aa4.96□□□□□ -1.62
ATG4A-204ENST00000372246 GRXCR1A8MXD5 290 aa4.96□□□□□ -1.62
ATG4A-204ENST00000372246 KRBOX1C9JBD0 128 aa4.96□□□□□ -1.62
ATG4A-204ENST00000372246 MCIDASD6RGH6 385 aa4.96□□□□□ -1.62
ATG4A-204ENST00000372246 H7C4K7 107 aa4.96□□□□□ -1.62
ATG4A-204ENST00000372246 I3L1I5 382 aaPredicted RBP4.96□□□□□ -1.62
ATG4A-204ENST00000372246 AGPAT2O15120 278 aa4.96□□□□□ -1.62
ATG4A-204ENST00000372246 CTNSO60931 367 aa4.96□□□□□ -1.62
ATG4A-204ENST00000372246 CDC123O75794 336 aaPredicted RBP4.96□□□□□ -1.62
ATG4A-204ENST00000372246 EIF3GO75821 320 aaKnown RBP eCLIP4.96□□□□□ -1.62
ATG4A-204ENST00000372246 KRT33AO76009 404 aa4.96□□□□□ -1.62
ATG4A-204ENST00000372246 ZFPL1O95159 310 aa4.96□□□□□ -1.62
ATG4A-204ENST00000372246 ACTL6AO96019 429 aa4.96□□□□□ -1.62
ATG4A-204ENST00000372246 PCCBP05166 539 aa4.96□□□□□ -1.62
ATG4A-204ENST00000372246 HMGB2P26583 209 aaKnown RBP4.96□□□□□ -1.62
ATG4A-204ENST00000372246 PTBP1P26599 531 aaKnown RBP eCLIP4.96□□□□□ -1.62
ATG4A-204ENST00000372246 ADH6P28332 368 aa4.96□□□□□ -1.62
ATG4A-204ENST00000372246 BDKRB2P30411 391 aa4.96□□□□□ -1.62
ATG4A-204ENST00000372246 ID4P47928 161 aa4.96□□□□□ -1.62
ATG4A-204ENST00000372246 KHKP50053 298 aa4.96□□□□□ -1.62
ATG4A-204ENST00000372246 ZNF157P51786 506 aaPredicted RBP4.96□□□□□ -1.62
ATG4A-204ENST00000372246 ART1P52961 327 aa4.96□□□□□ -1.62
ATG4A-204ENST00000372246 PPP2CBP62714 309 aa4.96□□□□□ -1.62
ATG4A-204ENST00000372246 PPP2CAP67775 309 aa4.96□□□□□ -1.62
ATG4A-204ENST00000372246 CSNK1G2P78368 415 aa4.96□□□□□ -1.62
ATG4A-204ENST00000372246 BTN3A2P78410 334 aa4.96□□□□□ -1.62
ATG4A-204ENST00000372246 FGL1Q08830 312 aa4.96□□□□□ -1.62
ATG4A-204ENST00000372246 TAF13Q15543 124 aa4.96□□□□□ -1.62
ATG4A-204ENST00000372246 NKPD1Q17RQ9 610 aa4.96□□□□□ -1.62
ATG4A-204ENST00000372246 SLC22A6Q4U2R8 563 aa4.96□□□□□ -1.62
ATG4A-204ENST00000372246 FAM46CQ5VWP2 391 aa4.96□□□□□ -1.62
ATG4A-204ENST00000372246 FCRL6Q6DN72 434 aa4.96□□□□□ -1.62
ATG4A-204ENST00000372246 TMEM71Q6P5X7 295 aa4.96□□□□□ -1.62
ATG4A-204ENST00000372246 IKBIPQ70UQ0 350 aa4.96□□□□□ -1.62
ATG4A-204ENST00000372246 PRSS41Q7RTY9 318 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms