RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 ZNF30P17039 623 aa14.31□□□□□ -0.12
GTF3C4-201ENST00000372146 HIST1H3AP68431 136 aa14.31□□□□□ -0.12
GTF3C4-201ENST00000372146 ACKR1Q16570 336 aa14.31□□□□□ -0.12
GTF3C4-201ENST00000372146 DEFB134Q4QY38 66 aa14.31□□□□□ -0.12
GTF3C4-201ENST00000372146 HBMQ6B0K9 141 aa14.31□□□□□ -0.12
GTF3C4-201ENST00000372146 RGMBQ6NW40 437 aa14.31□□□□□ -0.12
GTF3C4-201ENST00000372146 DOK4Q8TEW6 326 aa14.31□□□□□ -0.12
GTF3C4-201ENST00000372146 NARFLQ9H6Q4 476 aa14.31□□□□□ -0.12
GTF3C4-201ENST00000372146 CNOT2Q9NZN8 540 aaKnown RBP14.31□□□□□ -0.12
GTF3C4-201ENST00000372146 TRAV27A0A087WT01 109 aa14.31□□□□□ -0.12
GTF3C4-201ENST00000372146 NDUFB2O95178 105 aa14.31□□□□□ -0.12
GTF3C4-201ENST00000372146 TTRP02766 147 aa14.31□□□□□ -0.12
GTF3C4-201ENST00000372146 CT45A10P0DMU9 189 aa14.31□□□□□ -0.12
GTF3C4-201ENST00000372146 FGF7P21781 194 aa14.31□□□□□ -0.12
GTF3C4-201ENST00000372146 AKR1C3P42330 323 aa14.31□□□□□ -0.12
GTF3C4-201ENST00000372146 ARRB1P49407 418 aaPredicted RBP14.31□□□□□ -0.12
GTF3C4-201ENST00000372146 PHLDA2Q53GA4 152 aa14.31□□□□□ -0.12
GTF3C4-201ENST00000372146 KIAA0895LQ68EN5 471 aa14.31□□□□□ -0.12
GTF3C4-201ENST00000372146 ZNF534Q76KX8 674 aa14.31□□□□□ -0.12
GTF3C4-201ENST00000372146 CATSPERDQ86XM0 798 aa14.31□□□□□ -0.12
GTF3C4-201ENST00000372146 CADM3Q8N126 398 aa14.31□□□□□ -0.12
GTF3C4-201ENST00000372146 ANKRD19PQ9H560 264 aa14.31□□□□□ -0.12
GTF3C4-201ENST00000372146 DCAF13Q9NV06 445 aaKnown RBP14.31□□□□□ -0.12
GTF3C4-201ENST00000372146 FAM155AB1AL88 458 aaPredicted RBP14.31□□□□□ -0.12
GTF3C4-201ENST00000372146 SRP9P49458 86 aaKnown RBP14.31□□□□□ -0.12
GTF3C4-201ENST00000372146 CATSPEREQ5SY80 951 aa14.31□□□□□ -0.12
GTF3C4-201ENST00000372146 CD276Q5ZPR3 534 aa14.31□□□□□ -0.12
GTF3C4-201ENST00000372146 Q6ZN92 141 aa14.31□□□□□ -0.12
GTF3C4-201ENST00000372146 XKRY2A2RUG3 117 aa14.3□□□□□ -0.12
GTF3C4-201ENST00000372146 CDKN2DP55273 166 aa14.3□□□□□ -0.12
GTF3C4-201ENST00000372146 CRMP1Q14194 572 aa14.3□□□□□ -0.12
GTF3C4-201ENST00000372146 TREML2Q5T2D2 321 aa14.3□□□□□ -0.12
GTF3C4-201ENST00000372146 PET117Q6UWS5 81 aa14.3□□□□□ -0.12
GTF3C4-201ENST00000372146 LARP4Q71RC2 724 aaKnown RBP eCLIP14.3□□□□□ -0.12
GTF3C4-201ENST00000372146 GKN2Q86XP6 184 aa14.3□□□□□ -0.12
GTF3C4-201ENST00000372146 ASB11Q8WXH4 323 aa14.3□□□□□ -0.12
GTF3C4-201ENST00000372146 TSLPQ969D9 159 aa14.3□□□□□ -0.12
GTF3C4-201ENST00000372146 FGGYQ96C11 551 aa14.3□□□□□ -0.12
GTF3C4-201ENST00000372146 GPR160Q9UJ42 338 aa14.3□□□□□ -0.12
GTF3C4-201ENST00000372146 EDDM13A0A1B0GTR0 161 aa14.3□□□□□ -0.12
GTF3C4-201ENST00000372146 ZNF727A8MUV8 499 aa14.3□□□□□ -0.12
GTF3C4-201ENST00000372146 ACP2P11117 423 aa14.3□□□□□ -0.12
GTF3C4-201ENST00000372146 RHBDL3P58872 404 aa14.3□□□□□ -0.12
GTF3C4-201ENST00000372146 KCNG2Q9UJ96 466 aa14.3□□□□□ -0.12
GTF3C4-201ENST00000372146 MTCL1Q9Y4B5 1905 aaKnown RBP14.3□□□□□ -0.12
GTF3C4-201ENST00000372146 RPLP1P05386 114 aaKnown RBP14.3□□□□□ -0.12
GTF3C4-201ENST00000372146 FBXO22Q8NEZ5 403 aa14.3□□□□□ -0.12
GTF3C4-201ENST00000372146 CMTM3Q96MX0 182 aa14.3□□□□□ -0.12
GTF3C4-201ENST00000372146 SLC12A9Q9BXP2 914 aa14.3□□□□□ -0.12
GTF3C4-201ENST00000372146 RNF208Q9H0X6 261 aa14.3□□□□□ -0.12
GTF3C4-201ENST00000372146 CYB5R1Q9UHQ9 305 aa14.3□□□□□ -0.12
GTF3C4-201ENST00000372146 LRRC18Q8N456 261 aa14.3□□□□□ -0.12
GTF3C4-201ENST00000372146 RPUSD4Q96CM3 377 aaKnown RBP14.3□□□□□ -0.12
GTF3C4-201ENST00000372146 OR8B4Q96RC9 309 aa14.3□□□□□ -0.12
GTF3C4-201ENST00000372146 NUDT22Q9BRQ3 303 aa14.3□□□□□ -0.12
GTF3C4-201ENST00000372146 KCNK6Q9Y257 313 aa14.3□□□□□ -0.12
GTF3C4-201ENST00000372146 PEAK1Q9H792 1746 aa14.3□□□□□ -0.12
GTF3C4-201ENST00000372146 ABCC6O95255 1503 aa14.3□□□□□ -0.12
GTF3C4-201ENST00000372146 LY86O95711 162 aa14.3□□□□□ -0.12
GTF3C4-201ENST00000372146 CD1CP29017 333 aa14.3□□□□□ -0.12
GTF3C4-201ENST00000372146 CLDN12P56749 244 aa14.3□□□□□ -0.12
GTF3C4-201ENST00000372146 UBE2IP63279 158 aaKnown RBP14.3□□□□□ -0.12
GTF3C4-201ENST00000372146 SOWAHAQ2M3V2 549 aa14.3□□□□□ -0.12
GTF3C4-201ENST00000372146 FFAR4Q5NUL3 377 aa14.3□□□□□ -0.12
GTF3C4-201ENST00000372146 ZNF761Q86XN6 746 aaPredicted RBP14.3□□□□□ -0.12
GTF3C4-201ENST00000372146 C7orf43Q8WVR3 580 aa14.3□□□□□ -0.12
GTF3C4-201ENST00000372146 ATP13A2Q9NQ11 1180 aa14.3□□□□□ -0.12
GTF3C4-201ENST00000372146 PHRF1Q9P1Y6 1649 aaKnown RBP14.3□□□□□ -0.12
GTF3C4-201ENST00000372146 SCGB1A1P11684 91 aa14.3□□□□□ -0.12
GTF3C4-201ENST00000372146 KIAA0319Q5VV43 1072 aa14.3□□□□□ -0.12
GTF3C4-201ENST00000372146 SFXN4Q6P4A7 337 aa14.3□□□□□ -0.12
GTF3C4-201ENST00000372146 GLIS1Q8NBF1 620 aa14.3□□□□□ -0.12
GTF3C4-201ENST00000372146 OR5A2Q8NGI9 324 aa14.3□□□□□ -0.12
GTF3C4-201ENST00000372146 TMEM163Q8TC26 289 aa14.3□□□□□ -0.12
GTF3C4-201ENST00000372146 ZNF845Q96IR2 970 aaPredicted RBP14.3□□□□□ -0.12
GTF3C4-201ENST00000372146 SIRT3Q9NTG7 399 aaPredicted RBP14.3□□□□□ -0.12
GTF3C4-201ENST00000372146 TRAPPC1Q9Y5R8 145 aa14.3□□□□□ -0.12
GTF3C4-201ENST00000372146 HS3ST4Q9Y661 456 aa14.3□□□□□ -0.12
GTF3C4-201ENST00000372146 ADH5P11766 374 aa14.3□□□□□ -0.12
GTF3C4-201ENST00000372146 CLDN8P56748 225 aa14.3□□□□□ -0.12
GTF3C4-201ENST00000372146 RPS25P62851 125 aaKnown RBP14.3□□□□□ -0.12
GTF3C4-201ENST00000372146 OR52B6Q8NGF0 335 aa14.3□□□□□ -0.12
GTF3C4-201ENST00000372146 CASD1Q96PB1 797 aa14.3□□□□□ -0.12
GTF3C4-201ENST00000372146 C1QBP02746 253 aa14.29□□□□□ -0.12
GTF3C4-201ENST00000372146 GDI1P31150 447 aa14.29□□□□□ -0.12
GTF3C4-201ENST00000372146 IL2RGP31785 369 aa14.29□□□□□ -0.12
GTF3C4-201ENST00000372146 ACVRL1P37023 503 aa14.29□□□□□ -0.12
GTF3C4-201ENST00000372146 RAB13P51153 203 aa14.29□□□□□ -0.12
GTF3C4-201ENST00000372146 SLC14A2Q15849 920 aa14.29□□□□□ -0.12
GTF3C4-201ENST00000372146 CLEC12BQ2HXU8 276 aa14.29□□□□□ -0.12
GTF3C4-201ENST00000372146 RAB6CQ53S08 254 aa14.29□□□□□ -0.12
GTF3C4-201ENST00000372146 CLEC20AQ6ZU45 233 aa14.29□□□□□ -0.12
GTF3C4-201ENST00000372146 LRRC56Q8IYG6 542 aaPredicted RBP14.29□□□□□ -0.12
GTF3C4-201ENST00000372146 KCTD12Q96CX2 325 aaKnown RBP14.29□□□□□ -0.12
GTF3C4-201ENST00000372146 JTBO76095 146 aa14.29□□□□□ -0.12
GTF3C4-201ENST00000372146 MMP7P09237 267 aaPredicted RBP14.29□□□□□ -0.12
GTF3C4-201ENST00000372146 EDN3P14138 238 aa14.29□□□□□ -0.12
GTF3C4-201ENST00000372146 GRM2Q14416 872 aa14.29□□□□□ -0.12
GTF3C4-201ENST00000372146 UNC50Q53HI1 259 aa14.29□□□□□ -0.12
GTF3C4-201ENST00000372146 DAZLQ92904 295 aaKnown RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms