RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 SPRTNQ9H040 489 aaPredicted RBP10.5□□□□□ -0.73
TSPAN1-201ENST00000372003 C20orf85Q9H1P6 137 aa10.5□□□□□ -0.73
TSPAN1-201ENST00000372003 CACYBPQ9HB71 228 aaKnown RBP10.5□□□□□ -0.73
TSPAN1-201ENST00000372003 FAM60AQ9NP50 221 aa10.5□□□□□ -0.73
TSPAN1-201ENST00000372003 PDE7BQ9NP56 450 aa10.5□□□□□ -0.73
TSPAN1-201ENST00000372003 SLC6A20Q9NP91 592 aa10.5□□□□□ -0.73
TSPAN1-201ENST00000372003 RDH8Q9NYR8 311 aa10.5□□□□□ -0.73
TSPAN1-201ENST00000372003 RPS6KB2Q9UBS0 482 aa10.5□□□□□ -0.73
TSPAN1-201ENST00000372003 DCHS1Q96JQ0 3298 aa10.5□□□□□ -0.73
TSPAN1-201ENST00000372003 CCDC187A0A096LP49 1063 aa10.49□□□□□ -0.73
TSPAN1-201ENST00000372003 IGKV1-8A0A0C4DH67 115 aa10.49□□□□□ -0.73
TSPAN1-201ENST00000372003 CIB4A0PJX0 185 aa10.49□□□□□ -0.73
TSPAN1-201ENST00000372003 MFSD2BA6NFX1 497 aa10.49□□□□□ -0.73
TSPAN1-201ENST00000372003 SNRPGP15A8MWD9 76 aa10.49□□□□□ -0.73
TSPAN1-201ENST00000372003 G3V3Q6 166 aa10.49□□□□□ -0.73
TSPAN1-201ENST00000372003 BHLHE40O14503 412 aa10.49□□□□□ -0.73
TSPAN1-201ENST00000372003 OGG1O15527 345 aa10.49□□□□□ -0.73
TSPAN1-201ENST00000372003 B3GALNT1O75752 331 aa10.49□□□□□ -0.73
TSPAN1-201ENST00000372003 CH25HO95992 272 aa10.49□□□□□ -0.73
TSPAN1-201ENST00000372003 IL5P05113 134 aa10.49□□□□□ -0.73
TSPAN1-201ENST00000372003 JMJD7P0C870 316 aa10.49□□□□□ -0.73
TSPAN1-201ENST00000372003 BMP7P18075 431 aa10.49□□□□□ -0.73
TSPAN1-201ENST00000372003 CSNK2A2P19784 350 aaPredicted RBP10.49□□□□□ -0.73
TSPAN1-201ENST00000372003 TRHRP34981 398 aaPredicted RBP10.49□□□□□ -0.73
TSPAN1-201ENST00000372003 RGS8P57771 180 aaPredicted RBP10.49□□□□□ -0.73
TSPAN1-201ENST00000372003 COL9A2Q14055 689 aaPredicted RBP10.49□□□□□ -0.73
TSPAN1-201ENST00000372003 LASP1Q14847 261 aaKnown RBP10.49□□□□□ -0.73
TSPAN1-201ENST00000372003 DEFB110Q30KQ9 67 aa10.49□□□□□ -0.73
TSPAN1-201ENST00000372003 ACSM3Q53FZ2 586 aa10.49□□□□□ -0.73
TSPAN1-201ENST00000372003 UBE2NLQ5JXB2 153 aa10.49□□□□□ -0.73
TSPAN1-201ENST00000372003 FCRL6Q6DN72 434 aa10.49□□□□□ -0.73
TSPAN1-201ENST00000372003 MRM1Q6IN84 353 aaKnown RBP10.49□□□□□ -0.73
TSPAN1-201ENST00000372003 ARL9Q6T311 187 aa10.49□□□□□ -0.73
TSPAN1-201ENST00000372003 FAM198BQ6UWH4 519 aa10.49□□□□□ -0.73
TSPAN1-201ENST00000372003 SZRD1Q7Z422 152 aa10.49□□□□□ -0.73
TSPAN1-201ENST00000372003 NKAIN4Q8IVV8 208 aa10.49□□□□□ -0.73
TSPAN1-201ENST00000372003 NRMQ8IXM6 262 aa10.49□□□□□ -0.73
TSPAN1-201ENST00000372003 FTMTQ8N4E7 242 aa10.49□□□□□ -0.73
TSPAN1-201ENST00000372003 ASB13Q8WXK3 278 aa10.49□□□□□ -0.73
TSPAN1-201ENST00000372003 KISS1RQ969F8 398 aaPredicted RBP10.49□□□□□ -0.73
TSPAN1-201ENST00000372003 TCTN2Q96GX1 697 aa10.49□□□□□ -0.73
TSPAN1-201ENST00000372003 LIN37Q96GY3 246 aaPredicted RBP10.49□□□□□ -0.73
TSPAN1-201ENST00000372003 SLC41A2Q96JW4 573 aa10.49□□□□□ -0.73
TSPAN1-201ENST00000372003 PGLYRP3Q96LB9 341 aa10.49□□□□□ -0.73
TSPAN1-201ENST00000372003 SAMD8Q96LT4 415 aa10.49□□□□□ -0.73
TSPAN1-201ENST00000372003 OR6C1Q96RD1 312 aa10.49□□□□□ -0.73
TSPAN1-201ENST00000372003 REG4Q9BYZ8 158 aa10.49□□□□□ -0.73
TSPAN1-201ENST00000372003 SHARPINQ9H0F6 387 aa10.49□□□□□ -0.73
TSPAN1-201ENST00000372003 CMC2Q9NRP2 79 aa10.49□□□□□ -0.73
TSPAN1-201ENST00000372003 SEMA5BQ9P283 1151 aa10.49□□□□□ -0.73
TSPAN1-201ENST00000372003 C5AR2Q9P296 337 aa10.49□□□□□ -0.73
TSPAN1-201ENST00000372003 PISDQ9UG56 409 aa10.49□□□□□ -0.73
TSPAN1-201ENST00000372003 A0A1W2PNU3 283 aaPredicted RBP10.48□□□□□ -0.73
TSPAN1-201ENST00000372003 PLSCR5A0PG75 271 aa10.48□□□□□ -0.73
TSPAN1-201ENST00000372003 LRIT2A6NDA9 550 aa10.48□□□□□ -0.73
TSPAN1-201ENST00000372003 SCO1O75880 301 aa10.48□□□□□ -0.73
TSPAN1-201ENST00000372003 THBS1P07996 1170 aa10.48□□□□□ -0.73
TSPAN1-201ENST00000372003 ADRB1P08588 477 aa10.48□□□□□ -0.73
TSPAN1-201ENST00000372003 CD3GP09693 182 aa10.48□□□□□ -0.73
TSPAN1-201ENST00000372003 ACSM4P0C7M7 580 aa10.48□□□□□ -0.73
TSPAN1-201ENST00000372003 EPXP11678 715 aa10.48□□□□□ -0.73
TSPAN1-201ENST00000372003 IFNGR1P15260 489 aa10.48□□□□□ -0.73
TSPAN1-201ENST00000372003 PSMB1P20618 241 aaKnown RBP10.48□□□□□ -0.73
TSPAN1-201ENST00000372003 MPIP34949 423 aa10.48□□□□□ -0.73
TSPAN1-201ENST00000372003 MNDAP41218 407 aa10.48□□□□□ -0.73
TSPAN1-201ENST00000372003 SSR2P43308 183 aa10.48□□□□□ -0.73
TSPAN1-201ENST00000372003 GPR4P46093 362 aa10.48□□□□□ -0.73
TSPAN1-201ENST00000372003 ZP1P60852 638 aa10.48□□□□□ -0.73
TSPAN1-201ENST00000372003 OLFML2AQ68BL7 652 aa10.48□□□□□ -0.73
TSPAN1-201ENST00000372003 PLBD1Q6P4A8 553 aa10.48□□□□□ -0.73
TSPAN1-201ENST00000372003 ARSKQ6UWY0 536 aa10.48□□□□□ -0.73
TSPAN1-201ENST00000372003 IL20RBQ6UXL0 311 aa10.48□□□□□ -0.73
TSPAN1-201ENST00000372003 B3GLCTQ6Y288 498 aa10.48□□□□□ -0.73
TSPAN1-201ENST00000372003 KMT5CQ86Y97 462 aa10.48□□□□□ -0.73
TSPAN1-201ENST00000372003 CARFQ8N187 725 aa10.48□□□□□ -0.73
TSPAN1-201ENST00000372003 SYS1Q8N2H4 156 aa10.48□□□□□ -0.73
TSPAN1-201ENST00000372003 EIF4E3Q8N5X7 224 aaKnown RBP10.48□□□□□ -0.73
TSPAN1-201ENST00000372003 TMEM99Q8N816 258 aa10.48□□□□□ -0.73
TSPAN1-201ENST00000372003 OR51Q1Q8NH59 317 aa10.48□□□□□ -0.73
TSPAN1-201ENST00000372003 HS6ST2Q96MM7 605 aa10.48□□□□□ -0.73
TSPAN1-201ENST00000372003 ACTRT3Q9BYD9 372 aa10.48□□□□□ -0.73
TSPAN1-201ENST00000372003 OR52D1Q9H346 318 aa10.48□□□□□ -0.73
TSPAN1-201ENST00000372003 MTHFD2LQ9H903 347 aaPredicted RBP10.48□□□□□ -0.73
TSPAN1-201ENST00000372003 GPN1Q9HCN4 374 aaPredicted RBP10.48□□□□□ -0.73
TSPAN1-201ENST00000372003 APMAPQ9HDC9 416 aa10.48□□□□□ -0.73
TSPAN1-201ENST00000372003 CTPS2Q9NRF8 586 aa10.48□□□□□ -0.73
TSPAN1-201ENST00000372003 KCMF1Q9P0J7 381 aa10.48□□□□□ -0.73
TSPAN1-201ENST00000372003 NTMQ9P121 344 aa10.48□□□□□ -0.73
TSPAN1-201ENST00000372003 ZNF223Q9UK11 482 aaPredicted RBP10.48□□□□□ -0.73
TSPAN1-201ENST00000372003 CHST2Q9Y4C5 530 aa10.48□□□□□ -0.73
TSPAN1-201ENST00000372003 CNOT1A5YKK6 2376 aaKnown RBP10.48□□□□□ -0.73
TSPAN1-201ENST00000372003 A0A1W2PRG6 482 aa10.47□□□□□ -0.73
TSPAN1-201ENST00000372003 FEZF1A0PJY2 475 aa10.47□□□□□ -0.73
TSPAN1-201ENST00000372003 HMSDA8MTL9 139 aa10.47□□□□□ -0.73
TSPAN1-201ENST00000372003 PRR23D1E9PI22 279 aaPredicted RBP10.47□□□□□ -0.73
TSPAN1-201ENST00000372003 GABARAPH6UMI1 98 aa10.47□□□□□ -0.73
TSPAN1-201ENST00000372003 DVL2O14641 736 aa10.47□□□□□ -0.73
TSPAN1-201ENST00000372003 PDCD5O14737 125 aa10.47□□□□□ -0.73
TSPAN1-201ENST00000372003 HCRTR1O43613 425 aa10.47□□□□□ -0.73
TSPAN1-201ENST00000372003 OR1F1O43749 312 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms