RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 CDK5RAP2Q96SN8 1893 aa13.58□□□□□ -0.24
NDC1-201ENST00000371429 OR6C76A6NM76 312 aa13.58□□□□□ -0.24
NDC1-201ENST00000371429 DVL2O14641 736 aa13.58□□□□□ -0.24
NDC1-201ENST00000371429 OR7C1O76099 320 aaPredicted RBP13.58□□□□□ -0.24
NDC1-201ENST00000371429 IGHV3-9P01782 118 aa13.58□□□□□ -0.24
NDC1-201ENST00000371429 STEAP2Q8NFT2 490 aa13.58□□□□□ -0.24
NDC1-201ENST00000371429 ABHD11Q8NFV4 315 aa13.58□□□□□ -0.24
NDC1-201ENST00000371429 ZNF281Q9Y2X9 895 aa13.58□□□□□ -0.24
NDC1-201ENST00000371429 ZNF736B4DX44 427 aaPredicted RBP13.58□□□□□ -0.24
NDC1-201ENST00000371429 SURF4O15260 269 aa13.58□□□□□ -0.24
NDC1-201ENST00000371429 KLK10O43240 276 aa13.58□□□□□ -0.24
NDC1-201ENST00000371429 DRD5P21918 477 aa13.58□□□□□ -0.24
NDC1-201ENST00000371429 ELAVL4P26378 380 aaKnown RBP13.58□□□□□ -0.24
NDC1-201ENST00000371429 FOXK2Q01167 660 aa13.58□□□□□ -0.24
NDC1-201ENST00000371429 ZNF691Q5VV52 312 aa13.58□□□□□ -0.24
NDC1-201ENST00000371429 TMEM92Q6UXU6 159 aa13.58□□□□□ -0.24
NDC1-201ENST00000371429 PXKQ7Z7A4 578 aa13.58□□□□□ -0.24
NDC1-201ENST00000371429 LILRA2Q8N149 483 aa13.58□□□□□ -0.24
NDC1-201ENST00000371429 OR13C9Q8NGT0 318 aa13.58□□□□□ -0.24
NDC1-201ENST00000371429 C22orf15Q8WYQ4 148 aa13.58□□□□□ -0.24
NDC1-201ENST00000371429 BCL7BQ9BQE9 202 aa13.58□□□□□ -0.24
NDC1-201ENST00000371429 PPT2Q9UMR5 302 aa13.58□□□□□ -0.24
NDC1-201ENST00000371429 SNAPC5O75971 98 aa13.58□□□□□ -0.24
NDC1-201ENST00000371429 OR2T7P0C7T2 308 aa13.58□□□□□ -0.24
NDC1-201ENST00000371429 PRKACBP22694 351 aa13.58□□□□□ -0.24
NDC1-201ENST00000371429 TTC3P53804 2025 aa13.58□□□□□ -0.24
NDC1-201ENST00000371429 TBRG1Q3YBR2 411 aa13.58□□□□□ -0.24
NDC1-201ENST00000371429 LINC00346Q8IVM7 164 aa13.58□□□□□ -0.24
NDC1-201ENST00000371429 MRPL41Q8IXM3 137 aaKnown RBP13.58□□□□□ -0.24
NDC1-201ENST00000371429 SPARTQ8N0X7 666 aa13.58□□□□□ -0.24
NDC1-201ENST00000371429 KDM8Q8N371 416 aa13.58□□□□□ -0.24
NDC1-201ENST00000371429 SIMC1Q8NDZ2 872 aa13.58□□□□□ -0.24
NDC1-201ENST00000371429 OR2T27Q8NH04 317 aa13.58□□□□□ -0.24
NDC1-201ENST00000371429 ASB12Q8WXK4 309 aa13.58□□□□□ -0.24
NDC1-201ENST00000371429 ANKRD19PQ9H560 264 aa13.58□□□□□ -0.24
NDC1-201ENST00000371429 NLKQ9UBE8 527 aa13.58□□□□□ -0.24
NDC1-201ENST00000371429 PCDHGA1Q9Y5H4 931 aa13.58□□□□□ -0.24
NDC1-201ENST00000371429 TOXO94900 526 aa13.57□□□□□ -0.24
NDC1-201ENST00000371429 CD34P28906 385 aa13.57□□□□□ -0.24
NDC1-201ENST00000371429 GABREP78334 506 aa13.57□□□□□ -0.24
NDC1-201ENST00000371429 CAMKMTQ7Z624 323 aa13.57□□□□□ -0.24
NDC1-201ENST00000371429 OR7G2Q8NG99 324 aa13.57□□□□□ -0.24
NDC1-201ENST00000371429 SYNPRQ8TBG9 265 aa13.57□□□□□ -0.24
NDC1-201ENST00000371429 IER2Q9BTL4 223 aa13.57□□□□□ -0.24
NDC1-201ENST00000371429 METTL9Q9H1A3 318 aa13.57□□□□□ -0.24
NDC1-201ENST00000371429 TRIM64BA6NI03 449 aa13.57□□□□□ -0.24
NDC1-201ENST00000371429 A8MV72 311 aaPredicted RBP13.57□□□□□ -0.24
NDC1-201ENST00000371429 M0R233 179 aa13.57□□□□□ -0.24
NDC1-201ENST00000371429 S100A1P23297 94 aa13.57□□□□□ -0.24
NDC1-201ENST00000371429 OR2G6Q5TZ20 316 aa13.57□□□□□ -0.24
NDC1-201ENST00000371429 ZNF695Q8IW36 515 aa13.57□□□□□ -0.24
NDC1-201ENST00000371429 BCORP1Q8N888 145 aa13.57□□□□□ -0.24
NDC1-201ENST00000371429 OLIG1Q8TAK6 271 aa13.57□□□□□ -0.24
NDC1-201ENST00000371429 GGHQ92820 318 aa13.57□□□□□ -0.24
NDC1-201ENST00000371429 NIPAL2Q9H841 368 aa13.57□□□□□ -0.24
NDC1-201ENST00000371429 ASB1Q9Y576 335 aa13.57□□□□□ -0.24
NDC1-201ENST00000371429 ECM29Q5VYK3 1845 aa13.57□□□□□ -0.24
NDC1-201ENST00000371429 STMND1H3BQB6 276 aa13.57□□□□□ -0.24
NDC1-201ENST00000371429 I6L893 689 aaPredicted RBP13.57□□□□□ -0.24
NDC1-201ENST00000371429 ALPLP05186 524 aa13.57□□□□□ -0.24
NDC1-201ENST00000371429 FPR3P25089 353 aa13.57□□□□□ -0.24
NDC1-201ENST00000371429 PPIAP62937 165 aaKnown RBP13.57□□□□□ -0.24
NDC1-201ENST00000371429 EXOSC6Q5RKV6 272 aaKnown RBP13.57□□□□□ -0.24
NDC1-201ENST00000371429 CNIH2Q6PI25 160 aa13.57□□□□□ -0.24
NDC1-201ENST00000371429 COX15Q7KZN9 410 aa13.57□□□□□ -0.24
NDC1-201ENST00000371429 SGPP2Q8IWX5 399 aa13.57□□□□□ -0.24
NDC1-201ENST00000371429 PELI3Q8N2H9 469 aa13.57□□□□□ -0.24
NDC1-201ENST00000371429 GDPD1Q8N9F7 314 aa13.57□□□□□ -0.24
NDC1-201ENST00000371429 DEFB124Q8NES8 71 aa13.57□□□□□ -0.24
NDC1-201ENST00000371429 SLC35A4Q96G79 324 aa13.57□□□□□ -0.24
NDC1-201ENST00000371429 WDR76Q9H967 626 aa13.57□□□□□ -0.24
NDC1-201ENST00000371429 PRAMEF27A3QJZ7 478 aa13.57□□□□□ -0.24
NDC1-201ENST00000371429 VAMP5O95183 116 aa13.57□□□□□ -0.24
NDC1-201ENST00000371429 SLC1A3P43003 542 aa13.57□□□□□ -0.24
NDC1-201ENST00000371429 DEFA5Q01523 94 aa13.57□□□□□ -0.24
NDC1-201ENST00000371429 ILKQ13418 452 aa13.57□□□□□ -0.24
NDC1-201ENST00000371429 SMN1Q16637 294 aaKnown RBP13.57□□□□□ -0.24
NDC1-201ENST00000371429 MPEG1Q2M385 716 aa13.57□□□□□ -0.24
NDC1-201ENST00000371429 ESPNLQ6ZVH7 1005 aa13.57□□□□□ -0.24
NDC1-201ENST00000371429 C16orf52Q8NHV5 167 aa13.57□□□□□ -0.24
NDC1-201ENST00000371429 SORCS2Q96PQ0 1159 aa13.57□□□□□ -0.24
NDC1-201ENST00000371429 CCDC32Q9BV29 185 aa13.57□□□□□ -0.24
NDC1-201ENST00000371429 MED16Q9Y2X0 877 aa13.57□□□□□ -0.24
NDC1-201ENST00000371429 A0A0A6YYH2 397 aa13.56□□□□□ -0.24
NDC1-201ENST00000371429 A6NJ64 397 aa13.56□□□□□ -0.24
NDC1-201ENST00000371429 MT-CO3P00414 261 aa13.56□□□□□ -0.24
NDC1-201ENST00000371429 DNASE1P24855 282 aa13.56□□□□□ -0.24
NDC1-201ENST00000371429 CDK2P24941 298 aa13.56□□□□□ -0.24
NDC1-201ENST00000371429 EIF3IQ13347 325 aaKnown RBP13.56□□□□□ -0.24
NDC1-201ENST00000371429 GPR176Q14439 515 aa13.56□□□□□ -0.24
NDC1-201ENST00000371429 B3GNT8Q7Z7M8 397 aa13.56□□□□□ -0.24
NDC1-201ENST00000371429 MAML2Q8IZL2 1156 aaPredicted RBP13.56□□□□□ -0.24
NDC1-201ENST00000371429 SPAG16Q8N0X2 631 aa13.56□□□□□ -0.24
NDC1-201ENST00000371429 TSPAN10Q9H1Z9 355 aaPredicted RBP13.56□□□□□ -0.24
NDC1-201ENST00000371429 OR2J2O76002 312 aa13.56□□□□□ -0.24
NDC1-201ENST00000371429 PHC1P78364 1004 aa13.56□□□□□ -0.24
NDC1-201ENST00000371429 ARHGAP11BQ3KRB8 267 aa13.56□□□□□ -0.24
NDC1-201ENST00000371429 PRSS36Q5K4E3 855 aa13.56□□□□□ -0.24
NDC1-201ENST00000371429 GUSBP11Q6P575 273 aa13.56□□□□□ -0.24
NDC1-201ENST00000371429 CCBE1Q6UXH8 406 aaPredicted RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms