RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 FOLH1BQ9HBA9 442 aa13.52□□□□□ -0.25
LMO4-201ENST00000370542 ZFP64Q9NPA5 681 aa13.52□□□□□ -0.25
LMO4-201ENST00000370542 EXOSC4Q9NPD3 245 aaKnown RBP13.52□□□□□ -0.25
LMO4-201ENST00000370542 KCNJ16Q9NPI9 418 aa13.52□□□□□ -0.25
LMO4-201ENST00000370542 TNFRSF10DQ9UBN6 386 aa13.52□□□□□ -0.25
LMO4-201ENST00000370542 ADAM29Q9UKF5 820 aa13.52□□□□□ -0.25
LMO4-201ENST00000370542 ERVK-19Q9WJR5 959 aa13.52□□□□□ -0.25
LMO4-201ENST00000370542 NCKAP5O14513 1909 aa13.51□□□□□ -0.25
LMO4-201ENST00000370542 FAM221AA4D161 298 aa13.51□□□□□ -0.25
LMO4-201ENST00000370542 NKX2-6A6NCS4 301 aa13.51□□□□□ -0.25
LMO4-201ENST00000370542 TUBAL3A6NHL2 446 aa13.51□□□□□ -0.25
LMO4-201ENST00000370542 C12orf71A8MTZ7 269 aa13.51□□□□□ -0.25
LMO4-201ENST00000370542 AIFM1O95831 613 aa13.51□□□□□ -0.25
LMO4-201ENST00000370542 ADAP00813 363 aa13.51□□□□□ -0.25
LMO4-201ENST00000370542 PDYNP01213 254 aa13.51□□□□□ -0.25
LMO4-201ENST00000370542 TSPAN19P0C672 248 aa13.51□□□□□ -0.25
LMO4-201ENST00000370542 RFPL3SP0C7P2 107 aa13.51□□□□□ -0.25
LMO4-201ENST00000370542 NR2F6P10588 404 aa13.51□□□□□ -0.25
LMO4-201ENST00000370542 UBL4AP11441 157 aa13.51□□□□□ -0.25
LMO4-201ENST00000370542 RPS19P39019 145 aaKnown RBP13.51□□□□□ -0.25
LMO4-201ENST00000370542 CRISP1P54107 249 aa13.51□□□□□ -0.25
LMO4-201ENST00000370542 SPIBQ01892 262 aa13.51□□□□□ -0.25
LMO4-201ENST00000370542 ZNF267Q14586 743 aaPredicted RBP13.51□□□□□ -0.25
LMO4-201ENST00000370542 LAPTM4AQ15012 233 aa13.51□□□□□ -0.25
LMO4-201ENST00000370542 SPHARQ15513 63 aa13.51□□□□□ -0.25
LMO4-201ENST00000370542 SGO1Q5FBB7 561 aa13.51□□□□□ -0.25
LMO4-201ENST00000370542 HACD4Q5VWC8 232 aa13.51□□□□□ -0.25
LMO4-201ENST00000370542 NOXRED1Q6NXP6 359 aa13.51□□□□□ -0.25
LMO4-201ENST00000370542 MZT2AQ6P582 158 aa13.51□□□□□ -0.25
LMO4-201ENST00000370542 SLC29A4Q7RTT9 530 aa13.51□□□□□ -0.25
LMO4-201ENST00000370542 VTCN1Q7Z7D3 282 aa13.51□□□□□ -0.25
LMO4-201ENST00000370542 NUDT13Q86X67 352 aa13.51□□□□□ -0.25
LMO4-201ENST00000370542 CADM2Q8N3J6 435 aa13.51□□□□□ -0.25
LMO4-201ENST00000370542 ZNF615Q8N8J6 731 aa13.51□□□□□ -0.25
LMO4-201ENST00000370542 C17orf47Q8NEP4 570 aa13.51□□□□□ -0.25
LMO4-201ENST00000370542 OR4A15Q8NGL6 344 aa13.51□□□□□ -0.25
LMO4-201ENST00000370542 UCN3Q969E3 161 aa13.51□□□□□ -0.25
LMO4-201ENST00000370542 UBE2FQ969M7 185 aa13.51□□□□□ -0.25
LMO4-201ENST00000370542 TPD52L3Q96J77 140 aa13.51□□□□□ -0.25
LMO4-201ENST00000370542 SECISBP2Q96T21 854 aaKnown RBP13.51□□□□□ -0.25
LMO4-201ENST00000370542 PIP5K1AQ99755 562 aa13.51□□□□□ -0.25
LMO4-201ENST00000370542 SLC25A19Q9HC21 320 aa13.51□□□□□ -0.25
LMO4-201ENST00000370542 SLC6A13Q9NSD5 602 aa13.51□□□□□ -0.25
LMO4-201ENST00000370542 RBFOX1Q9NWB1 397 aaKnown RBP13.51□□□□□ -0.25
LMO4-201ENST00000370542 ING4Q9UNL4 249 aa13.51□□□□□ -0.25
LMO4-201ENST00000370542 DLGAP4Q9Y2H0 992 aa13.51□□□□□ -0.25
LMO4-201ENST00000370542 GSTK1Q9Y2Q3 226 aa13.51□□□□□ -0.25
LMO4-201ENST00000370542 AUP1Q9Y679 476 aa13.51□□□□□ -0.25
LMO4-201ENST00000370542 TRGV5A0A0B4J1U4 118 aa13.5□□□□□ -0.25
LMO4-201ENST00000370542 MYL12BO14950 172 aa13.5□□□□□ -0.25
LMO4-201ENST00000370542 PGRMC2O15173 223 aa13.5□□□□□ -0.25
LMO4-201ENST00000370542 FREM3P0C091 2139 aa13.5□□□□□ -0.25
LMO4-201ENST00000370542 GABRA1P14867 456 aa13.5□□□□□ -0.25
LMO4-201ENST00000370542 RHCEP18577 417 aa13.5□□□□□ -0.25
LMO4-201ENST00000370542 MYL12AP19105 171 aa13.5□□□□□ -0.25
LMO4-201ENST00000370542 S1PR1P21453 382 aa13.5□□□□□ -0.25
LMO4-201ENST00000370542 CDKN2CP42773 168 aa13.5□□□□□ -0.25
LMO4-201ENST00000370542 MAN2A2P49641 1150 aa13.5□□□□□ -0.25
LMO4-201ENST00000370542 CLDN20P56880 219 aa13.5□□□□□ -0.25
LMO4-201ENST00000370542 SMIM11AP58511 58 aa13.5□□□□□ -0.25
LMO4-201ENST00000370542 RRAS2P62070 204 aaPredicted RBP13.5□□□□□ -0.25
LMO4-201ENST00000370542 SSX1Q16384 188 aa13.5□□□□□ -0.25
LMO4-201ENST00000370542 BAK1Q16611 211 aa13.5□□□□□ -0.25
LMO4-201ENST00000370542 OCLNQ16625 522 aa13.5□□□□□ -0.25
LMO4-201ENST00000370542 FRG2Q64ET8 278 aa13.5□□□□□ -0.25
LMO4-201ENST00000370542 YIPF7Q8N8F6 280 aa13.5□□□□□ -0.25
LMO4-201ENST00000370542 OR10G3Q8NGC4 313 aa13.5□□□□□ -0.25
LMO4-201ENST00000370542 OR5M9Q8NGP3 310 aa13.5□□□□□ -0.25
LMO4-201ENST00000370542 OR5M3Q8NGP4 307 aa13.5□□□□□ -0.25
LMO4-201ENST00000370542 SPPL2AQ8TCT8 520 aa13.5□□□□□ -0.25
LMO4-201ENST00000370542 UBASH3BQ8TF42 649 aa13.5□□□□□ -0.25
LMO4-201ENST00000370542 ADIPOR1Q96A54 375 aa13.5□□□□□ -0.25
LMO4-201ENST00000370542 COQ8BQ96D53 544 aa13.5□□□□□ -0.25
LMO4-201ENST00000370542 TSSK3Q96PN8 268 aa13.5□□□□□ -0.25
LMO4-201ENST00000370542 FRG2BQ96QU4 278 aa13.5□□□□□ -0.25
LMO4-201ENST00000370542 HBEGFQ99075 208 aa13.5□□□□□ -0.25
LMO4-201ENST00000370542 AIFM2Q9BRQ8 373 aa13.5□□□□□ -0.25
LMO4-201ENST00000370542 C11orf54Q9H0W9 315 aaPredicted RBP13.5□□□□□ -0.25
LMO4-201ENST00000370542 TMEM38AQ9H6F2 299 aa13.5□□□□□ -0.25
LMO4-201ENST00000370542 RANBP3Q9H6Z4 567 aaPredicted RBP13.5□□□□□ -0.25
LMO4-201ENST00000370542 HHATLQ9HCP6 504 aa13.5□□□□□ -0.25
LMO4-201ENST00000370542 NDUFAF4Q9P032 175 aa13.5□□□□□ -0.25
LMO4-201ENST00000370542 SPRR3Q9UBC9 169 aa13.5□□□□□ -0.25
LMO4-201ENST00000370542 CES1P1Q9UKY3 287 aa13.5□□□□□ -0.25
LMO4-201ENST00000370542 BOKQ9UMX3 212 aaPredicted RBP13.5□□□□□ -0.25
LMO4-201ENST00000370542 MGAT4BQ9UQ53 548 aa13.5□□□□□ -0.25
LMO4-201ENST00000370542 LSM2Q9Y333 95 aaKnown RBP13.5□□□□□ -0.25
LMO4-201ENST00000370542 ARHGAP21Q5T5U3 1957 aa13.49□□□□□ -0.25
LMO4-201ENST00000370542 A0A0G2JNJ9 132 aa13.49□□□□□ -0.25
LMO4-201ENST00000370542 A0A1W2PS29 197 aa13.49□□□□□ -0.25
LMO4-201ENST00000370542 GLOD5A6NK44 160 aa13.49□□□□□ -0.25
LMO4-201ENST00000370542 SNTNA6NMZ2 147 aa13.49□□□□□ -0.25
LMO4-201ENST00000370542 SSX4O60224 188 aa13.49□□□□□ -0.25
LMO4-201ENST00000370542 OR10H2O60403 315 aa13.49□□□□□ -0.25
LMO4-201ENST00000370542 DIRAS1O95057 198 aa13.49□□□□□ -0.25
LMO4-201ENST00000370542 CSF3P09919 207 aa13.49□□□□□ -0.25
LMO4-201ENST00000370542 NAT1P18440 290 aa13.49□□□□□ -0.25
LMO4-201ENST00000370542 CBLP22681 906 aa13.49□□□□□ -0.25
LMO4-201ENST00000370542 ADH7P40394 386 aa13.49□□□□□ -0.25
LMO4-201ENST00000370542 CRYBB2P43320 205 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms