RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 ZNF730Q6ZMV8 503 aa13.16□□□□□ -0.3
COL9A1-204ENST00000370496 DMRTC2Q8IXT2 367 aaPredicted RBP13.16□□□□□ -0.3
COL9A1-204ENST00000370496 UBE2J2Q8N2K1 259 aa13.16□□□□□ -0.3
COL9A1-204ENST00000370496 OR5J2Q8NH18 312 aa13.16□□□□□ -0.3
COL9A1-204ENST00000370496 POP5Q969H6 163 aaKnown RBP13.16□□□□□ -0.3
COL9A1-204ENST00000370496 TMEM45BQ96B21 275 aa13.16□□□□□ -0.3
COL9A1-204ENST00000370496 SGTBQ96EQ0 304 aa13.16□□□□□ -0.3
COL9A1-204ENST00000370496 SPOCK3Q9BQ16 436 aa13.16□□□□□ -0.3
COL9A1-204ENST00000370496 ENKD1Q9H0I2 346 aa13.16□□□□□ -0.3
COL9A1-204ENST00000370496 ANKRD19PQ9H560 264 aa13.16□□□□□ -0.3
COL9A1-204ENST00000370496 NMNAT1Q9HAN9 279 aaPredicted RBP13.16□□□□□ -0.3
COL9A1-204ENST00000370496 SLC24A3Q9HC58 644 aa13.16□□□□□ -0.3
COL9A1-204ENST00000370496 MEPEQ9NQ76 525 aaPredicted RBP13.16□□□□□ -0.3
COL9A1-204ENST00000370496 MAN2C1Q9NTJ4 1040 aa13.16□□□□□ -0.3
COL9A1-204ENST00000370496 PRSS50Q9UI38 385 aa13.16□□□□□ -0.3
COL9A1-204ENST00000370496 ZNF229Q9UJW7 825 aa13.16□□□□□ -0.3
COL9A1-204ENST00000370496 TESMINQ9Y4I5 508 aa13.16□□□□□ -0.3
COL9A1-204ENST00000370496 ADGRG4Q8IZF6 3080 aa13.16□□□□□ -0.3
COL9A1-204ENST00000370496 TCRBV5S2A0A599 114 aa13.15□□□□□ -0.3
COL9A1-204ENST00000370496 HNRNPRO43390 633 aaKnown RBP13.15□□□□□ -0.3
COL9A1-204ENST00000370496 AKAP8O43823 692 aaKnown RBP13.15□□□□□ -0.3
COL9A1-204ENST00000370496 SERPINI2O75830 405 aa13.15□□□□□ -0.3
COL9A1-204ENST00000370496 IGHV3-9P01782 118 aa13.15□□□□□ -0.3
COL9A1-204ENST00000370496 HIST1H2ABP04908 130 aa13.15□□□□□ -0.3
COL9A1-204ENST00000370496 ADORA3P0DMS8 318 aa13.15□□□□□ -0.3
COL9A1-204ENST00000370496 IFI30P13284 250 aa13.15□□□□□ -0.3
COL9A1-204ENST00000370496 AHCYP23526 432 aa13.15□□□□□ -0.3
COL9A1-204ENST00000370496 POU3F1Q03052 451 aaPredicted RBP13.15□□□□□ -0.3
COL9A1-204ENST00000370496 LTBQ06643 244 aa13.15□□□□□ -0.3
COL9A1-204ENST00000370496 TRAP1Q12931 704 aaKnown RBP13.15□□□□□ -0.3
COL9A1-204ENST00000370496 FAM98BQ52LJ0 330 aaKnown RBP13.15□□□□□ -0.3
COL9A1-204ENST00000370496 HIST3H2AQ7L7L0 130 aa13.15□□□□□ -0.3
COL9A1-204ENST00000370496 SLC46A3Q7Z3Q1 461 aa13.15□□□□□ -0.3
COL9A1-204ENST00000370496 ZDHHC21Q8IVQ6 265 aa13.15□□□□□ -0.3
COL9A1-204ENST00000370496 UEVLDQ8IX04 471 aa13.15□□□□□ -0.3
COL9A1-204ENST00000370496 NRMQ8IXM6 262 aa13.15□□□□□ -0.3
COL9A1-204ENST00000370496 KDM8Q8N371 416 aa13.15□□□□□ -0.3
COL9A1-204ENST00000370496 PIK3C3Q8NEB9 887 aa13.15□□□□□ -0.3
COL9A1-204ENST00000370496 ACOT11Q8WXI4 607 aaPredicted RBP13.15□□□□□ -0.3
COL9A1-204ENST00000370496 HIST1H2ACQ93077 130 aa13.15□□□□□ -0.3
COL9A1-204ENST00000370496 MARVELD3Q96A59 401 aa13.15□□□□□ -0.3
COL9A1-204ENST00000370496 OXGR1Q96P68 337 aa13.15□□□□□ -0.3
COL9A1-204ENST00000370496 ZNF385AQ96PM9 386 aaKnown RBP13.15□□□□□ -0.3
COL9A1-204ENST00000370496 CADM1Q9BY67 442 aaKnown RBP13.15□□□□□ -0.3
COL9A1-204ENST00000370496 LRMDAQ9H2I8 198 aa13.15□□□□□ -0.3
COL9A1-204ENST00000370496 C20orf141Q9NUB4 165 aa13.15□□□□□ -0.3
COL9A1-204ENST00000370496 PARPBPQ9NWS1 579 aa13.15□□□□□ -0.3
COL9A1-204ENST00000370496 TUBAL3A6NHL2 446 aa13.14□□□□□ -0.31
COL9A1-204ENST00000370496 EBAG9O00559 213 aa13.14□□□□□ -0.31
COL9A1-204ENST00000370496 ACOT8O14734 319 aa13.14□□□□□ -0.31
COL9A1-204ENST00000370496 GSC2O15499 205 aa13.14□□□□□ -0.31
COL9A1-204ENST00000370496 OR7A10O76100 309 aa13.14□□□□□ -0.31
COL9A1-204ENST00000370496 IGF2P01344 180 aa13.14□□□□□ -0.31
COL9A1-204ENST00000370496 SAGP10523 405 aaPredicted RBP13.14□□□□□ -0.31
COL9A1-204ENST00000370496 EDNRAP25101 427 aa13.14□□□□□ -0.31
COL9A1-204ENST00000370496 CCKARP32238 428 aa13.14□□□□□ -0.31
COL9A1-204ENST00000370496 UGT2B10P36537 528 aa13.14□□□□□ -0.31
COL9A1-204ENST00000370496 KIR2DL3P43628 341 aa13.14□□□□□ -0.31
COL9A1-204ENST00000370496 CLDN17P56750 224 aa13.14□□□□□ -0.31
COL9A1-204ENST00000370496 CHRNB3Q05901 458 aa13.14□□□□□ -0.31
COL9A1-204ENST00000370496 FAM27E3Q08E93 113 aa13.14□□□□□ -0.31
COL9A1-204ENST00000370496 PGM2L1Q6PCE3 622 aa13.14□□□□□ -0.31
COL9A1-204ENST00000370496 Q6ZT83 130 aa13.14□□□□□ -0.31
COL9A1-204ENST00000370496 CREB3L2Q70SY1 520 aa13.14□□□□□ -0.31
COL9A1-204ENST00000370496 RRM2BQ7LG56 351 aa13.14□□□□□ -0.31
COL9A1-204ENST00000370496 AAED1Q7RTV5 226 aa13.14□□□□□ -0.31
COL9A1-204ENST00000370496 TSEN54Q7Z6J9 526 aaKnown RBP13.14□□□□□ -0.31
COL9A1-204ENST00000370496 LRRC17Q8N6Y2 441 aa13.14□□□□□ -0.31
COL9A1-204ENST00000370496 BPIFA2Q96DR5 249 aa13.14□□□□□ -0.31
COL9A1-204ENST00000370496 ZNF347Q96SE7 839 aa13.14□□□□□ -0.31
COL9A1-204ENST00000370496 MAGIXQ9H6Y5 334 aa13.14□□□□□ -0.31
COL9A1-204ENST00000370496 IL1RAPQ9NPH3 570 aa13.14□□□□□ -0.31
COL9A1-204ENST00000370496 KRCC1Q9NPI7 259 aaPredicted RBP13.14□□□□□ -0.31
COL9A1-204ENST00000370496 B3GAT1Q9P2W7 334 aa13.14□□□□□ -0.31
COL9A1-204ENST00000370496 A0A1W2PRQ8 180 aa13.13□□□□□ -0.31
COL9A1-204ENST00000370496 C11orf98E9PRG8 122 aa13.13□□□□□ -0.31
COL9A1-204ENST00000370496 C16orf97H3BN30 126 aa13.13□□□□□ -0.31
COL9A1-204ENST00000370496 PLPP3O14495 311 aa13.13□□□□□ -0.31
COL9A1-204ENST00000370496 RNF13O43567 381 aa13.13□□□□□ -0.31
COL9A1-204ENST00000370496 GADD45GO95257 159 aa13.13□□□□□ -0.31
COL9A1-204ENST00000370496 HPRP00739 348 aa13.13□□□□□ -0.31
COL9A1-204ENST00000370496 ASAH2BP0C7U1 165 aa13.13□□□□□ -0.31
COL9A1-204ENST00000370496 FUT4P22083 530 aa13.13□□□□□ -0.31
COL9A1-204ENST00000370496 IL32P24001 234 aa13.13□□□□□ -0.31
COL9A1-204ENST00000370496 RRM2P31350 389 aa13.13□□□□□ -0.31
COL9A1-204ENST00000370496 SMIM11AP58511 58 aa13.13□□□□□ -0.31
COL9A1-204ENST00000370496 DGCR6Q14129 220 aa13.13□□□□□ -0.31
COL9A1-204ENST00000370496 NIPAL3Q6P499 406 aa13.13□□□□□ -0.31
COL9A1-204ENST00000370496 MBOAT2Q6ZWT7 520 aa13.13□□□□□ -0.31
COL9A1-204ENST00000370496 SPATA24Q86W54 205 aa13.13□□□□□ -0.31
COL9A1-204ENST00000370496 CXorf67Q86X51 503 aaPredicted RBP13.13□□□□□ -0.31
COL9A1-204ENST00000370496 EPHX4Q8IUS5 362 aa13.13□□□□□ -0.31
COL9A1-204ENST00000370496 CDK20Q8IZL9 346 aa13.13□□□□□ -0.31
COL9A1-204ENST00000370496 ACBD4Q8NC06 268 aa13.13□□□□□ -0.31
COL9A1-204ENST00000370496 OR52J3Q8NH60 311 aa13.13□□□□□ -0.31
COL9A1-204ENST00000370496 SLC7A13Q8TCU3 470 aa13.13□□□□□ -0.31
COL9A1-204ENST00000370496 UPB1Q9UBR1 384 aa13.13□□□□□ -0.31
COL9A1-204ENST00000370496 SLC7A8Q9UHI5 535 aa13.13□□□□□ -0.31
COL9A1-204ENST00000370496 RCE1Q9Y256 329 aa13.13□□□□□ -0.31
COL9A1-204ENST00000370496 NOX1Q9Y5S8 564 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms