RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 ADORA3P0DMS8 318 aa21.48■■□□□ 1.03
SNX3-203ENST00000368979 GTF2E2P29084 291 aaKnown RBP21.48■■□□□ 1.03
SNX3-203ENST00000368979 ITGADQ13349 1161 aa21.48■■□□□ 1.03
SNX3-203ENST00000368979 CRMP1Q14194 572 aa21.48■■□□□ 1.03
SNX3-203ENST00000368979 PLBD1Q6P4A8 553 aa21.48■■□□□ 1.03
SNX3-203ENST00000368979 YRDCQ86U90 279 aaKnown RBP21.48■■□□□ 1.03
SNX3-203ENST00000368979 SLC37A3Q8NCC5 494 aa21.48■■□□□ 1.03
SNX3-203ENST00000368979 BBS1Q8NFJ9 593 aa21.48■■□□□ 1.03
SNX3-203ENST00000368979 OR14L1PQ8NHC6 308 aa21.48■■□□□ 1.03
SNX3-203ENST00000368979 OR5B2Q96R09 309 aa21.48■■□□□ 1.03
SNX3-203ENST00000368979 TTTY12Q9BZ98 90 aa21.48■■□□□ 1.03
SNX3-203ENST00000368979 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP21.48■■□□□ 1.03
SNX3-203ENST00000368979 DKK4Q9UBT3 224 aa21.48■■□□□ 1.03
SNX3-203ENST00000368979 B4GALT7Q9UBV7 327 aa21.48■■□□□ 1.03
SNX3-203ENST00000368979 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP21.48■■□□□ 1.03
SNX3-203ENST00000368979 PRR23D1E9PI22 279 aaPredicted RBP21.47■■□□□ 1.03
SNX3-203ENST00000368979 KLRC4-KLRK1H3BQV0 150 aa21.47■■□□□ 1.03
SNX3-203ENST00000368979 OPN1LWP04000 364 aa21.47■■□□□ 1.03
SNX3-203ENST00000368979 PRR23D2P0DMB1 279 aaPredicted RBP21.47■■□□□ 1.03
SNX3-203ENST00000368979 PCMT1P22061 227 aa21.47■■□□□ 1.03
SNX3-203ENST00000368979 SDHAP31040 664 aa21.47■■□□□ 1.03
SNX3-203ENST00000368979 SFTPDP35247 375 aa21.47■■□□□ 1.03
SNX3-203ENST00000368979 TNFSF10P50591 281 aa21.47■■□□□ 1.03
SNX3-203ENST00000368979 CDH11P55287 796 aa21.47■■□□□ 1.03
SNX3-203ENST00000368979 KHDRBS1Q07666 443 aaKnown RBP eCLIP21.47■■□□□ 1.03
SNX3-203ENST00000368979 ZP4Q12836 540 aa21.47■■□□□ 1.03
SNX3-203ENST00000368979 TMEM176BQ3YBM2 270 aaPredicted RBP21.47■■□□□ 1.03
SNX3-203ENST00000368979 NADK2Q4G0N4 442 aa21.47■■□□□ 1.03
SNX3-203ENST00000368979 XAF1Q6GPH4 301 aa21.47■■□□□ 1.03
SNX3-203ENST00000368979 NIPAL3Q6P499 406 aa21.47■■□□□ 1.03
SNX3-203ENST00000368979 GID4Q8IVV7 300 aa21.47■■□□□ 1.03
SNX3-203ENST00000368979 SDR9C7Q8NEX9 313 aa21.47■■□□□ 1.03
SNX3-203ENST00000368979 OR52E2Q8NGJ4 325 aa21.47■■□□□ 1.03
SNX3-203ENST00000368979 OR4K13Q8NH42 304 aa21.47■■□□□ 1.03
SNX3-203ENST00000368979 RFKQ969G6 155 aa21.47■■□□□ 1.03
SNX3-203ENST00000368979 RASD2Q96D21 266 aa21.47■■□□□ 1.03
SNX3-203ENST00000368979 Q96M85 177 aa21.47■■□□□ 1.03
SNX3-203ENST00000368979 TSPAN32Q96QS1 320 aa21.47■■□□□ 1.03
SNX3-203ENST00000368979 HCAR1Q9BXC0 346 aa21.47■■□□□ 1.03
SNX3-203ENST00000368979 CHST11Q9NPF2 352 aa21.47■■□□□ 1.03
SNX3-203ENST00000368979 INIPQ9NRY2 104 aa21.47■■□□□ 1.03
SNX3-203ENST00000368979 MRPS18AQ9NVS2 196 aaKnown RBP21.47■■□□□ 1.03
SNX3-203ENST00000368979 TEX13CA0A0J9YWL9 993 aa21.46■■□□□ 1.03
SNX3-203ENST00000368979 A0A1W2PNR3 127 aa21.46■■□□□ 1.03
SNX3-203ENST00000368979 C11orf98E9PRG8 122 aa21.46■■□□□ 1.03
SNX3-203ENST00000368979 GLSO94925 669 aaPredicted RBP21.46■■□□□ 1.03
SNX3-203ENST00000368979 OR6A2O95222 327 aa21.46■■□□□ 1.03
SNX3-203ENST00000368979 STSP08842 583 aa21.46■■□□□ 1.03
SNX3-203ENST00000368979 JUNBP17275 347 aaPredicted RBP21.46■■□□□ 1.03
SNX3-203ENST00000368979 MEOX1P50221 254 aa21.46■■□□□ 1.03
SNX3-203ENST00000368979 RAC1P63000 192 aa21.46■■□□□ 1.03
SNX3-203ENST00000368979 MVKQ03426 396 aa21.46■■□□□ 1.03
SNX3-203ENST00000368979 ST3GAL4Q11206 333 aa21.46■■□□□ 1.03
SNX3-203ENST00000368979 HYAL4Q2M3T9 481 aa21.46■■□□□ 1.03
SNX3-203ENST00000368979 ZNF766Q5HY98 468 aa21.46■■□□□ 1.03
SNX3-203ENST00000368979 EMC4Q5J8M3 183 aa21.46■■□□□ 1.03
SNX3-203ENST00000368979 H1FNTQ75WM6 255 aaPredicted RBP21.46■■□□□ 1.03
SNX3-203ENST00000368979 STX19Q8N4C7 294 aa21.46■■□□□ 1.03
SNX3-203ENST00000368979 LSM14AQ8ND56 463 aaKnown RBP21.46■■□□□ 1.03
SNX3-203ENST00000368979 PTP4A1Q93096 173 aa21.46■■□□□ 1.03
SNX3-203ENST00000368979 MIB2Q96AX9 1013 aa21.46■■□□□ 1.03
SNX3-203ENST00000368979 DDOQ99489 341 aa21.46■■□□□ 1.03
SNX3-203ENST00000368979 MED20Q9H944 212 aa21.46■■□□□ 1.03
SNX3-203ENST00000368979 FANCFQ9NPI8 374 aa21.46■■□□□ 1.03
SNX3-203ENST00000368979 TRAPPC4Q9Y296 219 aa21.46■■□□□ 1.03
SNX3-203ENST00000368979 AKAP13Q12802 2813 aa21.46■■□□□ 1.03
SNX3-203ENST00000368979 MS4A18H0YCH9 400 aa21.45■■□□□ 1.02
SNX3-203ENST00000368979 RNF13O43567 381 aa21.45■■□□□ 1.02
SNX3-203ENST00000368979 PMS2P2O95744 297 aa21.45■■□□□ 1.02
SNX3-203ENST00000368979 IGHMP01871 453 aa21.45■■□□□ 1.02
SNX3-203ENST00000368979 HPNP05981 417 aa21.45■■□□□ 1.02
SNX3-203ENST00000368979 C21orf33P30042 268 aaPredicted RBP21.45■■□□□ 1.02
SNX3-203ENST00000368979 HTR1FP30939 366 aa21.45■■□□□ 1.02
SNX3-203ENST00000368979 MS4A18Q3C1V0 323 aa21.45■■□□□ 1.02
SNX3-203ENST00000368979 WIPI1Q5MNZ9 446 aaPredicted RBP21.45■■□□□ 1.02
SNX3-203ENST00000368979 GPR139Q6DWJ6 353 aa21.45■■□□□ 1.02
SNX3-203ENST00000368979 SATL1Q86VE3 508 aa21.45■■□□□ 1.02
SNX3-203ENST00000368979 CYB561A3Q8NBI2 242 aa21.45■■□□□ 1.02
SNX3-203ENST00000368979 TMEM178AQ8NBL3 297 aa21.45■■□□□ 1.02
SNX3-203ENST00000368979 FAM98AQ8NCA5 519 aaKnown RBP21.45■■□□□ 1.02
SNX3-203ENST00000368979 NPEPL1Q8NDH3 523 aa21.45■■□□□ 1.02
SNX3-203ENST00000368979 ADPRHL1Q8NDY3 354 aa21.45■■□□□ 1.02
SNX3-203ENST00000368979 SMAD5Q99717 465 aaKnown RBP21.45■■□□□ 1.02
SNX3-203ENST00000368979 B3GALT5Q9Y2C3 310 aa21.45■■□□□ 1.02
SNX3-203ENST00000368979 CSAG2Q9Y5P2 127 aa21.45■■□□□ 1.02
SNX3-203ENST00000368979 TRAPPC6AO75865 159 aa21.45■■□□□ 1.02
SNX3-203ENST00000368979 ADRA2AP08913 450 aa21.45■■□□□ 1.02
SNX3-203ENST00000368979 PAICSP22234 425 aaKnown RBP21.45■■□□□ 1.02
SNX3-203ENST00000368979 SLC2A5P22732 501 aa21.45■■□□□ 1.02
SNX3-203ENST00000368979 AHCYP23526 432 aa21.45■■□□□ 1.02
SNX3-203ENST00000368979 MTNR1AP48039 350 aa21.45■■□□□ 1.02
SNX3-203ENST00000368979 TLE3Q04726 772 aa21.45■■□□□ 1.02
SNX3-203ENST00000368979 EMX1Q04741 257 aaPredicted RBP21.45■■□□□ 1.02
SNX3-203ENST00000368979 PUDPQ08623 228 aa21.45■■□□□ 1.02
SNX3-203ENST00000368979 ZNF239Q16600 458 aaKnown RBP21.45■■□□□ 1.02
SNX3-203ENST00000368979 TMPPEQ6ZT21 453 aa21.45■■□□□ 1.02
SNX3-203ENST00000368979 SPACA3Q8IXA5 215 aa21.45■■□□□ 1.02
SNX3-203ENST00000368979 SVOPQ8N4V2 548 aa21.45■■□□□ 1.02
SNX3-203ENST00000368979 ZFP62Q8NB50 900 aaPredicted RBP21.45■■□□□ 1.02
SNX3-203ENST00000368979 VCX3AQ9NNX9 186 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms