RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 HTR3AP46098 478 aa12.76□□□□□ -0.37
USF1-202ENST00000368020 RPS5P46782 204 aaKnown RBP12.76□□□□□ -0.37
USF1-202ENST00000368020 EIF2B2P49770 351 aaKnown RBP12.76□□□□□ -0.37
USF1-202ENST00000368020 DUSP3P51452 185 aaPredicted RBP12.76□□□□□ -0.37
USF1-202ENST00000368020 ERVK-25P63136 954 aa12.76□□□□□ -0.37
USF1-202ENST00000368020 ZNF117Q03924 483 aa12.76□□□□□ -0.37
USF1-202ENST00000368020 SLC3A1Q07837 685 aa12.76□□□□□ -0.37
USF1-202ENST00000368020 SPEM2Q0P670 501 aa12.76□□□□□ -0.37
USF1-202ENST00000368020 CDK5R1Q15078 307 aa12.76□□□□□ -0.37
USF1-202ENST00000368020 SF3A2Q15428 464 aaKnown RBP12.76□□□□□ -0.37
USF1-202ENST00000368020 HSPB2Q16082 182 aa12.76□□□□□ -0.37
USF1-202ENST00000368020 BAK1Q16611 211 aa12.76□□□□□ -0.37
USF1-202ENST00000368020 VWA2Q5GFL6 755 aa12.76□□□□□ -0.37
USF1-202ENST00000368020 MZT2BQ6NZ67 158 aa12.76□□□□□ -0.37
USF1-202ENST00000368020 CBLN3Q6UW01 205 aa12.76□□□□□ -0.37
USF1-202ENST00000368020 FAM122BQ7Z309 247 aa12.76□□□□□ -0.37
USF1-202ENST00000368020 CEACAM19Q7Z692 300 aa12.76□□□□□ -0.37
USF1-202ENST00000368020 RAB43Q86YS6 212 aa12.76□□□□□ -0.37
USF1-202ENST00000368020 ZBTB8BQ8NAP8 495 aaPredicted RBP12.76□□□□□ -0.37
USF1-202ENST00000368020 OR2T4Q8NH00 348 aa12.76□□□□□ -0.37
USF1-202ENST00000368020 HPS1Q92902 700 aa12.76□□□□□ -0.37
USF1-202ENST00000368020 OMA1Q96E52 524 aa12.76□□□□□ -0.37
USF1-202ENST00000368020 DCLRE1CQ96SD1 692 aaKnown RBP12.76□□□□□ -0.37
USF1-202ENST00000368020 NMNAT3Q96T66 252 aa12.76□□□□□ -0.37
USF1-202ENST00000368020 RNF32Q9H0A6 362 aa12.76□□□□□ -0.37
USF1-202ENST00000368020 TIGARQ9NQ88 270 aa12.76□□□□□ -0.37
USF1-202ENST00000368020 RABL2AQ9UBK7 228 aaPredicted RBP12.76□□□□□ -0.37
USF1-202ENST00000368020 GRHPRQ9UBQ7 328 aa12.76□□□□□ -0.37
USF1-202ENST00000368020 ST6GALNAC2Q9UJ37 374 aa12.76□□□□□ -0.37
USF1-202ENST00000368020 FBXL4Q9UKA2 621 aa12.76□□□□□ -0.37
USF1-202ENST00000368020 RABL2BQ9UNT1 228 aa12.76□□□□□ -0.37
USF1-202ENST00000368020 SIRT4Q9Y6E7 314 aaPredicted RBP12.76□□□□□ -0.37
USF1-202ENST00000368020 TRAV36DV7A0A075B6V5 113 aa12.75□□□□□ -0.37
USF1-202ENST00000368020 ZNF879B4DU55 563 aa12.75□□□□□ -0.37
USF1-202ENST00000368020 RENP00797 406 aa12.75□□□□□ -0.37
USF1-202ENST00000368020 TFP02787 698 aa12.75□□□□□ -0.37
USF1-202ENST00000368020 CSF3P09919 207 aa12.75□□□□□ -0.37
USF1-202ENST00000368020 AZGP1P25311 298 aaKnown RBP12.75□□□□□ -0.37
USF1-202ENST00000368020 ABCD3P28288 659 aa12.75□□□□□ -0.37
USF1-202ENST00000368020 RBMS1P29558 406 aaKnown RBP12.75□□□□□ -0.37
USF1-202ENST00000368020 P2RX1P51575 399 aa12.75□□□□□ -0.37
USF1-202ENST00000368020 POLR2HP52434 150 aaKnown RBP12.75□□□□□ -0.37
USF1-202ENST00000368020 SLC26A5P58743 744 aa12.75□□□□□ -0.37
USF1-202ENST00000368020 CTXN1P60606 82 aa12.75□□□□□ -0.37
USF1-202ENST00000368020 IL18Q14116 193 aa12.75□□□□□ -0.37
USF1-202ENST00000368020 CLPPQ16740 277 aaPredicted RBP12.75□□□□□ -0.37
USF1-202ENST00000368020 ZMAT1Q5H9K5 638 aa12.75□□□□□ -0.37
USF1-202ENST00000368020 AGAP6Q5VW22 663 aa12.75□□□□□ -0.37
USF1-202ENST00000368020 LEG1Q6P5S2 330 aa12.75□□□□□ -0.37
USF1-202ENST00000368020 APOOLQ6UXV4 268 aa12.75□□□□□ -0.37
USF1-202ENST00000368020 ZNF517Q6ZMY9 492 aaPredicted RBP12.75□□□□□ -0.37
USF1-202ENST00000368020 SLC16A9Q7RTY1 509 aa12.75□□□□□ -0.37
USF1-202ENST00000368020 MAMDC2Q7Z304 686 aaPredicted RBP12.75□□□□□ -0.37
USF1-202ENST00000368020 Q8N402 240 aa12.75□□□□□ -0.37
USF1-202ENST00000368020 LRRC75AQ8NAA5 344 aa12.75□□□□□ -0.37
USF1-202ENST00000368020 OR4D9Q8NGE8 314 aa12.75□□□□□ -0.37
USF1-202ENST00000368020 THAP4Q8WY91 577 aa12.75□□□□□ -0.37
USF1-202ENST00000368020 GHSRQ92847 366 aa12.75□□□□□ -0.37
USF1-202ENST00000368020 PELI1Q96FA3 418 aa12.75□□□□□ -0.37
USF1-202ENST00000368020 AGAP4Q96P64 663 aa12.75□□□□□ -0.37
USF1-202ENST00000368020 SNX18Q96RF0 628 aa12.75□□□□□ -0.37
USF1-202ENST00000368020 NUDT22Q9BRQ3 303 aa12.75□□□□□ -0.37
USF1-202ENST00000368020 PPP1R3EQ9H7J1 279 aa12.75□□□□□ -0.37
USF1-202ENST00000368020 TMEM9BQ9NQ34 198 aa12.75□□□□□ -0.37
USF1-202ENST00000368020 KLHL1Q9NR64 748 aa12.75□□□□□ -0.37
USF1-202ENST00000368020 RXFP3Q9NSD7 469 aa12.75□□□□□ -0.37
USF1-202ENST00000368020 TEKT2Q9UIF3 430 aa12.75□□□□□ -0.37
USF1-202ENST00000368020 DNAH14Q0VDD8 3507 aa12.75□□□□□ -0.37
USF1-202ENST00000368020 FER1L5A0AVI2 2057 aa12.74□□□□□ -0.37
USF1-202ENST00000368020 PTPRZ1P23471 2315 aaPredicted RBP12.74□□□□□ -0.37
USF1-202ENST00000368020 ZFHX2Q9C0A1 2572 aaPredicted RBP12.74□□□□□ -0.37
USF1-202ENST00000368020 TEX13CA0A0J9YWL9 993 aa12.74□□□□□ -0.37
USF1-202ENST00000368020 OR6C68A6NDL8 312 aa12.74□□□□□ -0.37
USF1-202ENST00000368020 PHYHO14832 338 aa12.74□□□□□ -0.37
USF1-202ENST00000368020 LRRTM2O43300 516 aa12.74□□□□□ -0.37
USF1-202ENST00000368020 HPGDSO60760 199 aa12.74□□□□□ -0.37
USF1-202ENST00000368020 TRAPPC2P0DI81 140 aa12.74□□□□□ -0.37
USF1-202ENST00000368020 TRAPPC2BP0DI82 140 aa12.74□□□□□ -0.37
USF1-202ENST00000368020 ITPKBP27987 946 aa12.74□□□□□ -0.37
USF1-202ENST00000368020 AQP2P41181 271 aa12.74□□□□□ -0.37
USF1-202ENST00000368020 GDI2P50395 445 aaKnown RBP12.74□□□□□ -0.37
USF1-202ENST00000368020 BLVRAP53004 296 aa12.74□□□□□ -0.37
USF1-202ENST00000368020 OR2B6P58173 313 aa12.74□□□□□ -0.37
USF1-202ENST00000368020 EGR4Q05215 589 aa12.74□□□□□ -0.37
USF1-202ENST00000368020 ACSM3Q53FZ2 586 aa12.74□□□□□ -0.37
USF1-202ENST00000368020 IDNKQ5T6J7 187 aa12.74□□□□□ -0.37
USF1-202ENST00000368020 HACD4Q5VWC8 232 aa12.74□□□□□ -0.37
USF1-202ENST00000368020 SFXN4Q6P4A7 337 aa12.74□□□□□ -0.37
USF1-202ENST00000368020 FAM220AQ7Z4H9 259 aa12.74□□□□□ -0.37
USF1-202ENST00000368020 NRARPQ7Z6K4 114 aa12.74□□□□□ -0.37
USF1-202ENST00000368020 BPHLQ86WA6 291 aaPredicted RBP12.74□□□□□ -0.37
USF1-202ENST00000368020 LSM14AQ8ND56 463 aaKnown RBP12.74□□□□□ -0.37
USF1-202ENST00000368020 IL17RDQ8NFM7 739 aa12.74□□□□□ -0.37
USF1-202ENST00000368020 OR6K6Q8NGW6 343 aa12.74□□□□□ -0.37
USF1-202ENST00000368020 OR5J2Q8NH18 312 aa12.74□□□□□ -0.37
USF1-202ENST00000368020 MOSPD2Q8NHP6 518 aa12.74□□□□□ -0.37
USF1-202ENST00000368020 TMEM234Q8WY98 164 aa12.74□□□□□ -0.37
USF1-202ENST00000368020 LPAR4Q99677 370 aa12.74□□□□□ -0.37
USF1-202ENST00000368020 ALG12Q9BV10 488 aa12.74□□□□□ -0.37
USF1-202ENST00000368020 EDEM2Q9BV94 578 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms