RNA–Protein interactions for RNA: ENST00000366814.3

H3F3A-202, Transcript of H3 histone family member 3A, humanhuman

TSL 2 BASIC

Gene H3F3A, Length 1,863 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-202ENST00000366814 TMEM164Q5U3C3 297 aa9.89□□□□□ -0.83
H3F3A-202ENST00000366814 PAPD4Q6PIY7 484 aaKnown RBP9.89□□□□□ -0.83
H3F3A-202ENST00000366814 NANOGNBQ7Z5D8 188 aa9.89□□□□□ -0.83
H3F3A-202ENST00000366814 LRRC17Q8N6Y2 441 aa9.89□□□□□ -0.83
H3F3A-202ENST00000366814 AGBL5Q8NDL9 886 aa9.89□□□□□ -0.83
H3F3A-202ENST00000366814 SMPDL3BQ92485 455 aa9.89□□□□□ -0.83
H3F3A-202ENST00000366814 KISS1RQ969F8 398 aaPredicted RBP9.89□□□□□ -0.83
H3F3A-202ENST00000366814 ABTB1Q969K4 478 aaPredicted RBP9.89□□□□□ -0.83
H3F3A-202ENST00000366814 TMCO6Q96DC7 493 aa9.89□□□□□ -0.83
H3F3A-202ENST00000366814 CNN2Q99439 309 aaKnown RBP9.89□□□□□ -0.83
H3F3A-202ENST00000366814 TBX5Q99593 518 aa9.89□□□□□ -0.83
H3F3A-202ENST00000366814 CRB3Q9BUF7 120 aa9.89□□□□□ -0.83
H3F3A-202ENST00000366814 HCAR1Q9BXC0 346 aa9.89□□□□□ -0.83
H3F3A-202ENST00000366814 ADAM19Q9H013 955 aa9.89□□□□□ -0.83
H3F3A-202ENST00000366814 RERGLQ9H628 205 aa9.89□□□□□ -0.83
H3F3A-202ENST00000366814 FKRPQ9H9S5 495 aa9.89□□□□□ -0.83
H3F3A-202ENST00000366814 ADGRL4Q9HBW9 690 aa9.89□□□□□ -0.83
H3F3A-202ENST00000366814 SMURF1Q9HCE7 757 aa9.89□□□□□ -0.83
H3F3A-202ENST00000366814 MMP25Q9NPA2 562 aa9.89□□□□□ -0.83
H3F3A-202ENST00000366814 NRIP3Q9NQ35 241 aa9.89□□□□□ -0.83
H3F3A-202ENST00000366814 BABAM2Q9NXR7 383 aa9.89□□□□□ -0.83
H3F3A-202ENST00000366814 ZNF229Q9UJW7 825 aa9.89□□□□□ -0.83
H3F3A-202ENST00000366814 HIF3AQ9Y2N7 669 aa9.89□□□□□ -0.83
H3F3A-202ENST00000366814 PCDHGB6Q9Y5F9 930 aa9.89□□□□□ -0.83
H3F3A-202ENST00000366814 NOX1Q9Y5S8 564 aa9.89□□□□□ -0.83
H3F3A-202ENST00000366814 NPFFR2Q9Y5X5 522 aa9.89□□□□□ -0.83
H3F3A-202ENST00000366814 FAM208BQ5VWN6 2430 aa9.89□□□□□ -0.83
H3F3A-202ENST00000366814 FER1L5A0AVI2 2057 aa9.89□□□□□ -0.83
H3F3A-202ENST00000366814 IGKV1D-42A0A075B6H8 117 aa9.89□□□□□ -0.83
H3F3A-202ENST00000366814 IGHV3-20A0A0C4DH32 117 aa9.89□□□□□ -0.83
H3F3A-202ENST00000366814 IQCMA0A1B0GVH7 501 aa9.89□□□□□ -0.83
H3F3A-202ENST00000366814 ZC3H12DA2A288 527 aaKnown RBP9.89□□□□□ -0.83
H3F3A-202ENST00000366814 ISPDA4D126 451 aa9.89□□□□□ -0.83
H3F3A-202ENST00000366814 VSTM2BA6NLU5 285 aa9.89□□□□□ -0.83
H3F3A-202ENST00000366814 LOC110117498-PIK3R3F6TDL0 507 aa9.89□□□□□ -0.83
H3F3A-202ENST00000366814 IMPA2O14732 288 aa9.89□□□□□ -0.83
H3F3A-202ENST00000366814 RGS5O15539 181 aa9.89□□□□□ -0.83
H3F3A-202ENST00000366814 SULT1C4O75897 302 aa9.89□□□□□ -0.83
H3F3A-202ENST00000366814 TIAF1O95411 115 aa9.89□□□□□ -0.83
H3F3A-202ENST00000366814 MRPL3P09001 348 aaKnown RBP9.89□□□□□ -0.83
H3F3A-202ENST00000366814 FGF5P12034 268 aa9.89□□□□□ -0.83
H3F3A-202ENST00000366814 CCL4P13236 92 aa9.89□□□□□ -0.83
H3F3A-202ENST00000366814 CD53P19397 219 aa9.89□□□□□ -0.83
H3F3A-202ENST00000366814 ETV6P41212 452 aa9.89□□□□□ -0.83
H3F3A-202ENST00000366814 HTR3AP46098 478 aa9.89□□□□□ -0.83
H3F3A-202ENST00000366814 POLR2HP52434 150 aaKnown RBP9.89□□□□□ -0.83
H3F3A-202ENST00000366814 ZNF362Q5T0B9 420 aaPredicted RBP9.89□□□□□ -0.83
H3F3A-202ENST00000366814 CD200R1LQ6Q8B3 271 aa9.89□□□□□ -0.83
H3F3A-202ENST00000366814 C5orf46Q6UWT4 87 aa9.89□□□□□ -0.83
H3F3A-202ENST00000366814 DCDC5Q6ZRR9 648 aa9.89□□□□□ -0.83
H3F3A-202ENST00000366814 CPEB2Q7Z5Q1 589 aaKnown RBP9.89□□□□□ -0.83
H3F3A-202ENST00000366814 CENPSQ8N2Z9 138 aa9.89□□□□□ -0.83
H3F3A-202ENST00000366814 TMEM99Q8N816 258 aa9.89□□□□□ -0.83
H3F3A-202ENST00000366814 SLC38A9Q8NBW4 561 aa9.89□□□□□ -0.83
H3F3A-202ENST00000366814 OR8K3Q8NH51 312 aa9.89□□□□□ -0.83
H3F3A-202ENST00000366814 B4GALNT2Q8NHY0 566 aa9.89□□□□□ -0.83
H3F3A-202ENST00000366814 TMEM234Q8WY98 164 aa9.89□□□□□ -0.83
H3F3A-202ENST00000366814 SLC25A46Q96AG3 418 aa9.89□□□□□ -0.83
H3F3A-202ENST00000366814 KCNS3Q9BQ31 491 aa9.89□□□□□ -0.83
H3F3A-202ENST00000366814 ZNF649Q9BS31 505 aa9.89□□□□□ -0.83
H3F3A-202ENST00000366814 KATNB1Q9BVA0 655 aa9.89□□□□□ -0.83
H3F3A-202ENST00000366814 TMED9Q9BVK6 235 aa9.89□□□□□ -0.83
H3F3A-202ENST00000366814 SLC26A1Q9H2B4 701 aa9.89□□□□□ -0.83
H3F3A-202ENST00000366814 PPIEQ9UNP9 301 aaKnown RBP9.89□□□□□ -0.83
H3F3A-202ENST00000366814 POLHQ9Y253 713 aa9.89□□□□□ -0.83
H3F3A-202ENST00000366814 SF3B6Q9Y3B4 125 aaKnown RBP9.89□□□□□ -0.83
H3F3A-202ENST00000366814 PTPRQQ9UMZ3 2332 aa9.88□□□□□ -0.83
H3F3A-202ENST00000366814 AHCTF1Q8WYP5 2266 aa9.88□□□□□ -0.83
H3F3A-202ENST00000366814 TRAV36DV7A0A075B6V5 113 aa9.88□□□□□ -0.83
H3F3A-202ENST00000366814 LRRN3E7EW58 273 aa9.88□□□□□ -0.83
H3F3A-202ENST00000366814 MEN1O00255 615 aa9.88□□□□□ -0.83
H3F3A-202ENST00000366814 CASKO14936 926 aa9.88□□□□□ -0.83
H3F3A-202ENST00000366814 FADS1O60427 444 aa9.88□□□□□ -0.83
H3F3A-202ENST00000366814 RGS9O75916 674 aaPredicted RBP9.88□□□□□ -0.83
H3F3A-202ENST00000366814 MT-ATP6P00846 226 aa9.88□□□□□ -0.83
H3F3A-202ENST00000366814 KLK3P07288 261 aaPredicted RBP9.88□□□□□ -0.83
H3F3A-202ENST00000366814 CD14P08571 375 aa9.88□□□□□ -0.83
H3F3A-202ENST00000366814 OR2T7P0C7T2 308 aa9.88□□□□□ -0.83
H3F3A-202ENST00000366814 GAAP10253 952 aa9.88□□□□□ -0.83
H3F3A-202ENST00000366814 NAGAP17050 411 aa9.88□□□□□ -0.83
H3F3A-202ENST00000366814 F8A1P23610 371 aa9.88□□□□□ -0.83
H3F3A-202ENST00000366814 CD79BP40259 229 aa9.88□□□□□ -0.83
H3F3A-202ENST00000366814 ERVK-25P63136 954 aa9.88□□□□□ -0.83
H3F3A-202ENST00000366814 FABP5Q01469 135 aa9.88□□□□□ -0.83
H3F3A-202ENST00000366814 TLE3Q04726 772 aa9.88□□□□□ -0.83
H3F3A-202ENST00000366814 MXD1Q05195 221 aa9.88□□□□□ -0.83
H3F3A-202ENST00000366814 KRR1Q13601 381 aaKnown RBP9.88□□□□□ -0.83
H3F3A-202ENST00000366814 IL10RAQ13651 578 aa9.88□□□□□ -0.83
H3F3A-202ENST00000366814 GGTLC2Q14390 218 aa9.88□□□□□ -0.83
H3F3A-202ENST00000366814 C11orf91Q3C1V1 193 aa9.88□□□□□ -0.83
H3F3A-202ENST00000366814 EMC4Q5J8M3 183 aa9.88□□□□□ -0.83
H3F3A-202ENST00000366814 ZNF385CQ66K41 422 aaPredicted RBP9.88□□□□□ -0.83
H3F3A-202ENST00000366814 B3GLCTQ6Y288 498 aa9.88□□□□□ -0.83
H3F3A-202ENST00000366814 BTLAQ7Z6A9 289 aa9.88□□□□□ -0.83
H3F3A-202ENST00000366814 ZFP41Q8N8Y5 198 aa9.88□□□□□ -0.83
H3F3A-202ENST00000366814 APCDD1LQ8NCL9 501 aa9.88□□□□□ -0.83
H3F3A-202ENST00000366814 OR2T27Q8NH04 317 aa9.88□□□□□ -0.83
H3F3A-202ENST00000366814 PPP1R14BQ96C90 147 aa9.88□□□□□ -0.83
H3F3A-202ENST00000366814 TRMT61AQ96FX7 289 aaKnown RBP9.88□□□□□ -0.83
H3F3A-202ENST00000366814 TM9SF2Q99805 663 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms