RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 CSNK2A3Q8NEV1 391 aa14.78□□□□□ -0.04
CLSTN1-201ENST00000361311 WDR89Q96FK6 387 aaPredicted RBP14.78□□□□□ -0.04
CLSTN1-201ENST00000361311 PRTFDC1Q9NRG1 225 aa14.78□□□□□ -0.04
CLSTN1-201ENST00000361311 CMC2Q9NRP2 79 aa14.78□□□□□ -0.04
CLSTN1-201ENST00000361311 RPH3AQ9Y2J0 694 aaPredicted RBP14.78□□□□□ -0.04
CLSTN1-201ENST00000361311 KIAA1217Q5T5P2 1943 aa14.78□□□□□ -0.04
CLSTN1-201ENST00000361311 HOXB5P09067 269 aa14.78□□□□□ -0.04
CLSTN1-201ENST00000361311 CD22P20273 847 aa14.78□□□□□ -0.04
CLSTN1-201ENST00000361311 EXOSC7Q15024 291 aaKnown RBP14.78□□□□□ -0.04
CLSTN1-201ENST00000361311 SLC9A3R2Q15599 337 aa14.78□□□□□ -0.04
CLSTN1-201ENST00000361311 ZNF511Q8NB15 262 aa14.78□□□□□ -0.04
CLSTN1-201ENST00000361311 DERL3Q96Q80 235 aa14.78□□□□□ -0.04
CLSTN1-201ENST00000361311 POFUT1Q9H488 388 aa14.78□□□□□ -0.04
CLSTN1-201ENST00000361311 ZMAT3Q9HA38 289 aaKnown RBP14.78□□□□□ -0.04
CLSTN1-201ENST00000361311 KDM4EB2RXH2 506 aaPredicted RBP14.78□□□□□ -0.04
CLSTN1-201ENST00000361311 LDB3O75112 727 aa14.78□□□□□ -0.04
CLSTN1-201ENST00000361311 MGMTP16455 207 aa14.78□□□□□ -0.04
CLSTN1-201ENST00000361311 POU3F4P49335 361 aa14.78□□□□□ -0.04
CLSTN1-201ENST00000361311 LGALSLQ3ZCW2 172 aaPredicted RBP14.78□□□□□ -0.04
CLSTN1-201ENST00000361311 ADAM5Q6NVV9 412 aa14.78□□□□□ -0.04
CLSTN1-201ENST00000361311 OR11H7Q8NGC8 314 aa14.78□□□□□ -0.04
CLSTN1-201ENST00000361311 OR5M1Q8NGP8 315 aa14.78□□□□□ -0.04
CLSTN1-201ENST00000361311 PFN4Q8NHR9 129 aa14.78□□□□□ -0.04
CLSTN1-201ENST00000361311 GFOD1Q9NXC2 390 aa14.78□□□□□ -0.04
CLSTN1-201ENST00000361311 ATG4BQ9Y4P1 393 aa14.78□□□□□ -0.04
CLSTN1-201ENST00000361311 KCNE1BA0A087WTH5 132 aa14.77□□□□□ -0.04
CLSTN1-201ENST00000361311 IFITM5A6NNB3 132 aa14.77□□□□□ -0.04
CLSTN1-201ENST00000361311 S100A8P05109 93 aa14.77□□□□□ -0.04
CLSTN1-201ENST00000361311 CDK5Q00535 292 aa14.77□□□□□ -0.04
CLSTN1-201ENST00000361311 RBM39Q14498 530 aaKnown RBP14.77□□□□□ -0.04
CLSTN1-201ENST00000361311 LPCAT3Q6P1A2 487 aa14.77□□□□□ -0.04
CLSTN1-201ENST00000361311 GPR32P1Q8NGA4 272 aa14.77□□□□□ -0.04
CLSTN1-201ENST00000361311 SSX3Q99909 188 aa14.77□□□□□ -0.04
CLSTN1-201ENST00000361311 ZDHHC4Q9NPG8 344 aa14.77□□□□□ -0.04
CLSTN1-201ENST00000361311 RNF186Q9NXI6 227 aa14.77□□□□□ -0.04
CLSTN1-201ENST00000361311 GABRQQ9UN88 632 aa14.77□□□□□ -0.04
CLSTN1-201ENST00000361311 ZNF337Q9Y3M9 751 aa14.77□□□□□ -0.04
CLSTN1-201ENST00000361311 COL16A1Q07092 1604 aaPredicted RBP14.77□□□□□ -0.04
CLSTN1-201ENST00000361311 LRIT2A6NDA9 550 aa14.77□□□□□ -0.04
CLSTN1-201ENST00000361311 OR5H14A6NHG9 310 aa14.77□□□□□ -0.04
CLSTN1-201ENST00000361311 ZNF726A6NNF4 738 aa14.77□□□□□ -0.04
CLSTN1-201ENST00000361311 ZNF28P17035 718 aa14.77□□□□□ -0.04
CLSTN1-201ENST00000361311 CTRB1P17538 263 aa14.77□□□□□ -0.04
CLSTN1-201ENST00000361311 CTRB2Q6GPI1 263 aa14.77□□□□□ -0.04
CLSTN1-201ENST00000361311 GLDNQ6ZMI3 551 aaPredicted RBP14.77□□□□□ -0.04
CLSTN1-201ENST00000361311 SSX9Q7RTT3 188 aa14.77□□□□□ -0.04
CLSTN1-201ENST00000361311 SIRT6Q8N6T7 355 aa14.77□□□□□ -0.04
CLSTN1-201ENST00000361311 OR4K17Q8NGC6 315 aa14.77□□□□□ -0.04
CLSTN1-201ENST00000361311 TRMT61AQ96FX7 289 aaKnown RBP14.77□□□□□ -0.04
CLSTN1-201ENST00000361311 MYADMQ96S97 322 aa14.77□□□□□ -0.04
CLSTN1-201ENST00000361311 SLC6A17Q9H1V8 727 aa14.77□□□□□ -0.04
CLSTN1-201ENST00000361311 ELOVL3Q9HB03 270 aa14.77□□□□□ -0.04
CLSTN1-201ENST00000361311 HRASLS2Q9NWW9 162 aa14.77□□□□□ -0.04
CLSTN1-201ENST00000361311 HHLA2Q9UM44 414 aa14.77□□□□□ -0.04
CLSTN1-201ENST00000361311 CYP8B1Q9UNU6 501 aa14.77□□□□□ -0.04
CLSTN1-201ENST00000361311 C17orf113A0A1B0GUU1 675 aa14.77□□□□□ -0.05
CLSTN1-201ENST00000361311 SLC22A23A1A5C7 686 aa14.77□□□□□ -0.05
CLSTN1-201ENST00000361311 NR0B1P51843 470 aaKnown RBP14.77□□□□□ -0.05
CLSTN1-201ENST00000361311 OR2M4Q96R27 311 aa14.77□□□□□ -0.05
CLSTN1-201ENST00000361311 LYSMD1Q96S90 227 aa14.77□□□□□ -0.05
CLSTN1-201ENST00000361311 TMEM231Q9H6L2 316 aa14.77□□□□□ -0.05
CLSTN1-201ENST00000361311 ATG12O94817 140 aa14.77□□□□□ -0.05
CLSTN1-201ENST00000361311 ATF1P18846 271 aa14.77□□□□□ -0.05
CLSTN1-201ENST00000361311 GPR18Q14330 331 aa14.77□□□□□ -0.05
CLSTN1-201ENST00000361311 C2orf27AQ580R0 203 aa14.77□□□□□ -0.05
CLSTN1-201ENST00000361311 PRAMEF8Q5VWM4 474 aa14.77□□□□□ -0.05
CLSTN1-201ENST00000361311 PRAMEF7Q5VXH5 474 aa14.77□□□□□ -0.05
CLSTN1-201ENST00000361311 ACOT7LQ6ZUV0 252 aa14.77□□□□□ -0.05
CLSTN1-201ENST00000361311 IL17RCQ8NAC3 791 aa14.77□□□□□ -0.05
CLSTN1-201ENST00000361311 FAM71CQ8NEG0 241 aa14.77□□□□□ -0.05
CLSTN1-201ENST00000361311 SERINC2Q96SA4 455 aa14.77□□□□□ -0.05
CLSTN1-201ENST00000361311 SEMA4CQ9C0C4 833 aa14.77□□□□□ -0.05
CLSTN1-201ENST00000361311 BCL2L10Q9HD36 194 aa14.77□□□□□ -0.05
CLSTN1-201ENST00000361311 STEAP1Q9UHE8 339 aa14.77□□□□□ -0.05
CLSTN1-201ENST00000361311 TMPRSS11DO60235 418 aa14.76□□□□□ -0.05
CLSTN1-201ENST00000361311 CALCBP10092 127 aa14.76□□□□□ -0.05
CLSTN1-201ENST00000361311 TYRP1P17643 537 aa14.76□□□□□ -0.05
CLSTN1-201ENST00000361311 OR10K2Q6IF99 312 aa14.76□□□□□ -0.05
CLSTN1-201ENST00000361311 GRASPQ7Z6J2 395 aaPredicted RBP14.76□□□□□ -0.05
CLSTN1-201ENST00000361311 TCEAL8Q8IYN2 117 aa14.76□□□□□ -0.05
CLSTN1-201ENST00000361311 ZNF283Q8N7M2 679 aa14.76□□□□□ -0.05
CLSTN1-201ENST00000361311 FNDC9Q8TBE3 224 aa14.76□□□□□ -0.05
CLSTN1-201ENST00000361311 TRMT2BQ96GJ1 504 aaKnown RBP14.76□□□□□ -0.05
CLSTN1-201ENST00000361311 ZFP57Q9NU63 452 aa14.76□□□□□ -0.05
CLSTN1-201ENST00000361311 ZMAT5Q9UDW3 170 aaKnown RBP14.76□□□□□ -0.05
CLSTN1-201ENST00000361311 A0A1B0GWA3 101 aa14.76□□□□□ -0.05
CLSTN1-201ENST00000361311 TMEM212A6NML5 194 aa14.76□□□□□ -0.05
CLSTN1-201ENST00000361311 GPR85P60893 370 aa14.76□□□□□ -0.05
CLSTN1-201ENST00000361311 ALKBH1Q13686 389 aaKnown RBP14.76□□□□□ -0.05
CLSTN1-201ENST00000361311 MORN1Q5T089 497 aa14.76□□□□□ -0.05
CLSTN1-201ENST00000361311 TMEM64Q6YI46 380 aa14.76□□□□□ -0.05
CLSTN1-201ENST00000361311 CSNK1A1LQ8N752 337 aa14.76□□□□□ -0.05
CLSTN1-201ENST00000361311 NAXEQ8NCW5 288 aa14.76□□□□□ -0.05
CLSTN1-201ENST00000361311 TMED6Q8WW62 240 aa14.76□□□□□ -0.05
CLSTN1-201ENST00000361311 FAM3DQ96BQ1 224 aa14.76□□□□□ -0.05
CLSTN1-201ENST00000361311 SMIM19Q96E16 107 aa14.76□□□□□ -0.05
CLSTN1-201ENST00000361311 CLSTN3Q9BQT9 956 aa14.76□□□□□ -0.05
CLSTN1-201ENST00000361311 MS4A7Q9GZW8 240 aaPredicted RBP14.76□□□□□ -0.05
CLSTN1-201ENST00000361311 ACKR4Q9NPB9 350 aa14.76□□□□□ -0.05
CLSTN1-201ENST00000361311 ZNFX1Q9P2E3 1918 aaKnown RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms