RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 GPR35Q9HC97 309 aa5.03□□□□□ -1.6
CDC42SE2-201ENST00000360515 ARGLU1Q9NWB6 273 aaPredicted RBP5.03□□□□□ -1.6
CDC42SE2-201ENST00000360515 ZDHHC8Q9ULC8 765 aa5.03□□□□□ -1.6
CDC42SE2-201ENST00000360515 ANGPTL3Q9Y5C1 460 aa5.03□□□□□ -1.6
CDC42SE2-201ENST00000360515 IGHV1-69-2A0A0G2JMI3 117 aa5.03□□□□□ -1.6
CDC42SE2-201ENST00000360515 J3QW42 95 aa5.03□□□□□ -1.6
CDC42SE2-201ENST00000360515 XPNPEP2O43895 674 aa5.03□□□□□ -1.6
CDC42SE2-201ENST00000360515 MELTFP08582 738 aa5.03□□□□□ -1.6
CDC42SE2-201ENST00000360515 PTNP21246 168 aa5.03□□□□□ -1.6
CDC42SE2-201ENST00000360515 PRKAA2P54646 552 aa5.03□□□□□ -1.6
CDC42SE2-201ENST00000360515 KLC3Q6P597 504 aa5.03□□□□□ -1.6
CDC42SE2-201ENST00000360515 KLHL24Q6TFL4 600 aa5.03□□□□□ -1.6
CDC42SE2-201ENST00000360515 RBMS3Q6XE24 437 aaKnown RBP5.03□□□□□ -1.6
CDC42SE2-201ENST00000360515 SELENOMQ8WWX9 145 aa5.03□□□□□ -1.6
CDC42SE2-201ENST00000360515 HTRA1Q92743 480 aa5.03□□□□□ -1.6
CDC42SE2-201ENST00000360515 C7orf69Q9H7B7 122 aa5.03□□□□□ -1.6
CDC42SE2-201ENST00000360515 B3GAT1Q9P2W7 334 aa5.03□□□□□ -1.6
CDC42SE2-201ENST00000360515 TBK1Q9UHD2 729 aa5.03□□□□□ -1.6
CDC42SE2-201ENST00000360515 CORINQ9Y5Q5 1042 aa5.03□□□□□ -1.6
CDC42SE2-201ENST00000360515 AUP1Q9Y679 476 aa5.03□□□□□ -1.6
CDC42SE2-201ENST00000360515 LCE6AA0A183 80 aa5.02□□□□□ -1.61
CDC42SE2-201ENST00000360515 PTBP3O95758 552 aaKnown RBP5.02□□□□□ -1.61
CDC42SE2-201ENST00000360515 IGF2P01344 180 aa5.02□□□□□ -1.61
CDC42SE2-201ENST00000360515 TFPTP0C1Z6 253 aa5.02□□□□□ -1.61
CDC42SE2-201ENST00000360515 SLC7A1P30825 629 aa5.02□□□□□ -1.61
CDC42SE2-201ENST00000360515 SFTPDP35247 375 aa5.02□□□□□ -1.61
CDC42SE2-201ENST00000360515 EPS8Q12929 822 aa5.02□□□□□ -1.61
CDC42SE2-201ENST00000360515 HIKESHIQ53FT3 197 aa5.02□□□□□ -1.61
CDC42SE2-201ENST00000360515 CLEC6AQ6EIG7 209 aa5.02□□□□□ -1.61
CDC42SE2-201ENST00000360515 ZNF620Q6ZNG0 422 aa5.02□□□□□ -1.61
CDC42SE2-201ENST00000360515 FOXL2NBQ6ZUU3 175 aa5.02□□□□□ -1.61
CDC42SE2-201ENST00000360515 SPATA21Q7Z572 469 aa5.02□□□□□ -1.61
CDC42SE2-201ENST00000360515 SNX32Q86XE0 403 aa5.02□□□□□ -1.61
CDC42SE2-201ENST00000360515 VRK1Q99986 396 aaPredicted RBP5.02□□□□□ -1.61
CDC42SE2-201ENST00000360515 ANKZF1Q9H8Y5 726 aa5.02□□□□□ -1.61
CDC42SE2-201ENST00000360515 SEC61A2Q9H9S3 476 aa5.02□□□□□ -1.61
CDC42SE2-201ENST00000360515 KIR2DS1A0A191URI9 304 aa5.02□□□□□ -1.61
CDC42SE2-201ENST00000360515 A0A1W2PNR3 127 aa5.02□□□□□ -1.61
CDC42SE2-201ENST00000360515 TMEM72A0PK05 275 aa5.02□□□□□ -1.61
CDC42SE2-201ENST00000360515 FAM187AA6NFU0 413 aa5.02□□□□□ -1.61
CDC42SE2-201ENST00000360515 DUXAA6NLW8 204 aa5.02□□□□□ -1.61
CDC42SE2-201ENST00000360515 TSPAN19P0C672 248 aa5.02□□□□□ -1.61
CDC42SE2-201ENST00000360515 MYZAPP0CAP1 466 aa5.02□□□□□ -1.61
CDC42SE2-201ENST00000360515 VSIG8P0DPA2 414 aa5.02□□□□□ -1.61
CDC42SE2-201ENST00000360515 RPS6KA3P51812 740 aa5.02□□□□□ -1.61
CDC42SE2-201ENST00000360515 TIGD2Q4W5G0 525 aa5.02□□□□□ -1.61
CDC42SE2-201ENST00000360515 ARMCX4Q5H9R4 360 aa5.02□□□□□ -1.61
CDC42SE2-201ENST00000360515 ZNF584Q8IVC4 421 aa5.02□□□□□ -1.61
CDC42SE2-201ENST00000360515 SPICQ8N5J4 248 aa5.02□□□□□ -1.61
CDC42SE2-201ENST00000360515 KIR3DL3Q8N743 410 aa5.02□□□□□ -1.61
CDC42SE2-201ENST00000360515 PTGR2Q8N8N7 351 aaPredicted RBP5.02□□□□□ -1.61
CDC42SE2-201ENST00000360515 EXOSC8Q96B26 276 aaKnown RBP5.02□□□□□ -1.61
CDC42SE2-201ENST00000360515 OR5B2Q96R09 309 aa5.02□□□□□ -1.61
CDC42SE2-201ENST00000360515 ACSS3Q9H6R3 686 aa5.02□□□□□ -1.61
CDC42SE2-201ENST00000360515 HINT3Q9NQE9 182 aaKnown RBP5.02□□□□□ -1.61
CDC42SE2-201ENST00000360515 TREM2Q9NZC2 230 aa5.02□□□□□ -1.61
CDC42SE2-201ENST00000360515 RNF14Q9UBS8 474 aa5.02□□□□□ -1.61
CDC42SE2-201ENST00000360515 ZNF232Q9UNY5 417 aa5.02□□□□□ -1.61
CDC42SE2-201ENST00000360515 CADP27708 2225 aa5.02□□□□□ -1.61
CDC42SE2-201ENST00000360515 IGHV3-15A0A0B4J1V0 119 aa5.01□□□□□ -1.61
CDC42SE2-201ENST00000360515 CCT8L1PA6NM43 557 aa5.01□□□□□ -1.61
CDC42SE2-201ENST00000360515 A8MT66 165 aa5.01□□□□□ -1.61
CDC42SE2-201ENST00000360515 NPHS1O60500 1241 aa5.01□□□□□ -1.61
CDC42SE2-201ENST00000360515 GSTA1P08263 222 aa5.01□□□□□ -1.61
CDC42SE2-201ENST00000360515 ANXA4P09525 319 aaPredicted RBP5.01□□□□□ -1.61
CDC42SE2-201ENST00000360515 WNT2P09544 360 aa5.01□□□□□ -1.61
CDC42SE2-201ENST00000360515 CLCQ05315 142 aa5.01□□□□□ -1.61
CDC42SE2-201ENST00000360515 STX5Q13190 355 aa5.01□□□□□ -1.61
CDC42SE2-201ENST00000360515 DDX39BQ13838 428 aaKnown RBP5.01□□□□□ -1.61
CDC42SE2-201ENST00000360515 FASTKD3Q14CZ7 662 aaKnown RBP5.01□□□□□ -1.61
CDC42SE2-201ENST00000360515 ZNF385BQ569K4 471 aa5.01□□□□□ -1.61
CDC42SE2-201ENST00000360515 RNF220Q5VTB9 566 aa5.01□□□□□ -1.61
CDC42SE2-201ENST00000360515 NOXRED1Q6NXP6 359 aa5.01□□□□□ -1.61
CDC42SE2-201ENST00000360515 MUC20Q8N307 709 aaPredicted RBP5.01□□□□□ -1.61
CDC42SE2-201ENST00000360515 GPR151Q8TDV0 419 aa5.01□□□□□ -1.61
CDC42SE2-201ENST00000360515 CFAP36Q96G28 342 aa5.01□□□□□ -1.61
CDC42SE2-201ENST00000360515 KCNS3Q9BQ31 491 aa5.01□□□□□ -1.61
CDC42SE2-201ENST00000360515 THUMPD3Q9BV44 507 aaKnown RBP5.01□□□□□ -1.61
CDC42SE2-201ENST00000360515 PTDSS2Q9BVG9 487 aa5.01□□□□□ -1.61
CDC42SE2-201ENST00000360515 CTPS2Q9NRF8 586 aa5.01□□□□□ -1.61
CDC42SE2-201ENST00000360515 TBCCD1Q9NVR7 557 aa5.01□□□□□ -1.61
CDC42SE2-201ENST00000360515 UPB1Q9UBR1 384 aa5.01□□□□□ -1.61
CDC42SE2-201ENST00000360515 NPTNQ9Y639 398 aa5.01□□□□□ -1.61
CDC42SE2-201ENST00000360515 HEATR1Q9H583 2144 aaKnown RBP5.01□□□□□ -1.61
CDC42SE2-201ENST00000360515 NPIPB13A6NJU9 1138 aa5.01□□□□□ -1.61
CDC42SE2-201ENST00000360515 ADARB2-AS1A8MUL3 147 aa5.01□□□□□ -1.61
CDC42SE2-201ENST00000360515 NPIPB4C9JG80 1138 aa5.01□□□□□ -1.61
CDC42SE2-201ENST00000360515 SEC14L2O76054 403 aa5.01□□□□□ -1.61
CDC42SE2-201ENST00000360515 DUS4LO95620 317 aaKnown RBP5.01□□□□□ -1.61
CDC42SE2-201ENST00000360515 SERPINA5P05154 406 aa5.01□□□□□ -1.61
CDC42SE2-201ENST00000360515 ARRB2P32121 409 aa5.01□□□□□ -1.61
CDC42SE2-201ENST00000360515 IER3P46695 156 aa5.01□□□□□ -1.61
CDC42SE2-201ENST00000360515 CCT3P49368 545 aaKnown RBP5.01□□□□□ -1.61
CDC42SE2-201ENST00000360515 NPY4RP50391 375 aa5.01□□□□□ -1.61
CDC42SE2-201ENST00000360515 EFNB2P52799 333 aa5.01□□□□□ -1.61
CDC42SE2-201ENST00000360515 ACSM2AQ08AH3 577 aa5.01□□□□□ -1.61
CDC42SE2-201ENST00000360515 CCNIQ14094 377 aa5.01□□□□□ -1.61
CDC42SE2-201ENST00000360515 ACSM2BQ68CK6 577 aa5.01□□□□□ -1.61
CDC42SE2-201ENST00000360515 FRRS1Q6ZNA5 592 aa5.01□□□□□ -1.61
CDC42SE2-201ENST00000360515 EIF3MQ7L2H7 374 aaKnown RBP5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms