RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 FZD8Q9H461 694 aa12.34□□□□□ -0.43
SRGAP3-201ENST00000360413 PELI2Q9HAT8 420 aa12.34□□□□□ -0.43
SRGAP3-201ENST00000360413 TM7SF3Q9NS93 570 aa12.34□□□□□ -0.43
SRGAP3-201ENST00000360413 ZNF586Q9NXT0 402 aa12.34□□□□□ -0.43
SRGAP3-201ENST00000360413 KPTNQ9Y664 436 aa12.34□□□□□ -0.43
SRGAP3-201ENST00000360413 FGF4P08620 206 aa12.34□□□□□ -0.43
SRGAP3-201ENST00000360413 NTSR1P30989 418 aa12.34□□□□□ -0.43
SRGAP3-201ENST00000360413 PTTG1IPP53801 180 aa12.34□□□□□ -0.43
SRGAP3-201ENST00000360413 PIN1Q13526 163 aaPredicted RBP12.34□□□□□ -0.43
SRGAP3-201ENST00000360413 DEFB132Q7Z7B7 95 aa12.34□□□□□ -0.43
SRGAP3-201ENST00000360413 LSMEM2Q8N112 164 aa12.34□□□□□ -0.43
SRGAP3-201ENST00000360413 CPNE4Q96A23 557 aaPredicted RBP12.34□□□□□ -0.43
SRGAP3-201ENST00000360413 L3HYPDHQ96EM0 354 aa12.34□□□□□ -0.43
SRGAP3-201ENST00000360413 TMEM184BQ9Y519 407 aaPredicted RBP12.34□□□□□ -0.43
SRGAP3-201ENST00000360413 OR6C76A6NM76 312 aa12.34□□□□□ -0.43
SRGAP3-201ENST00000360413 TRIM77I1YAP6 450 aa12.34□□□□□ -0.43
SRGAP3-201ENST00000360413 RRP8O43159 456 aaKnown RBP12.34□□□□□ -0.43
SRGAP3-201ENST00000360413 AKR1C1Q04828 323 aa12.34□□□□□ -0.43
SRGAP3-201ENST00000360413 PQLC3Q8N755 202 aa12.34□□□□□ -0.43
SRGAP3-201ENST00000360413 ADIPOR1Q96A54 375 aa12.34□□□□□ -0.43
SRGAP3-201ENST00000360413 ELF4Q99607 663 aaPredicted RBP12.34□□□□□ -0.43
SRGAP3-201ENST00000360413 CHRDL1Q9BU40 450 aa12.34□□□□□ -0.43
SRGAP3-201ENST00000360413 HHLA2Q9UM44 414 aa12.34□□□□□ -0.43
SRGAP3-201ENST00000360413 NPFFR2Q9Y5X5 522 aa12.34□□□□□ -0.43
SRGAP3-201ENST00000360413 UMAD1C9J7I0 102 aa12.34□□□□□ -0.43
SRGAP3-201ENST00000360413 M0R3H8 397 aa12.34□□□□□ -0.43
SRGAP3-201ENST00000360413 DCTN6O00399 190 aa12.34□□□□□ -0.43
SRGAP3-201ENST00000360413 TCRBP04435 133 aa12.34□□□□□ -0.43
SRGAP3-201ENST00000360413 CALCRP30988 508 aa12.34□□□□□ -0.43
SRGAP3-201ENST00000360413 BAXQ07812 192 aa12.34□□□□□ -0.43
SRGAP3-201ENST00000360413 TMEM88Q6PEY1 159 aa12.34□□□□□ -0.43
SRGAP3-201ENST00000360413 CDS1Q92903 461 aa12.34□□□□□ -0.43
SRGAP3-201ENST00000360413 KCTD12Q96CX2 325 aaKnown RBP12.34□□□□□ -0.43
SRGAP3-201ENST00000360413 PIGQQ9BRB3 760 aa12.34□□□□□ -0.43
SRGAP3-201ENST00000360413 COL14A1Q05707 1796 aaKnown RBP12.34□□□□□ -0.43
SRGAP3-201ENST00000360413 TRAF3IP2O43734 574 aaPredicted RBP12.34□□□□□ -0.43
SRGAP3-201ENST00000360413 RPL17P18621 184 aaKnown RBP12.34□□□□□ -0.43
SRGAP3-201ENST00000360413 PGGT1BP53609 377 aa12.34□□□□□ -0.43
SRGAP3-201ENST00000360413 RGNQ15493 299 aa12.34□□□□□ -0.43
SRGAP3-201ENST00000360413 IMP4Q96G21 291 aaKnown RBP12.34□□□□□ -0.43
SRGAP3-201ENST00000360413 ZNF355PQ9NSJ1 428 aa12.34□□□□□ -0.43
SRGAP3-201ENST00000360413 YTHDF2Q9Y5A9 579 aaKnown RBP12.34□□□□□ -0.43
SRGAP3-201ENST00000360413 KIR2DS5A0A0G2JLQ3 304 aa12.33□□□□□ -0.44
SRGAP3-201ENST00000360413 A0A0G2JNG1 304 aa12.33□□□□□ -0.44
SRGAP3-201ENST00000360413 TCRBV3S1A0A5B6 114 aa12.33□□□□□ -0.44
SRGAP3-201ENST00000360413 FEZF1A0PJY2 475 aa12.33□□□□□ -0.44
SRGAP3-201ENST00000360413 F5H5K5 113 aa12.33□□□□□ -0.44
SRGAP3-201ENST00000360413 KIR2DS3K7RE56 304 aa12.33□□□□□ -0.44
SRGAP3-201ENST00000360413 KIR2DS5Q14953 304 aa12.33□□□□□ -0.44
SRGAP3-201ENST00000360413 ESPNLQ6ZVH7 1005 aa12.33□□□□□ -0.44
SRGAP3-201ENST00000360413 OR1M1Q8NGA1 313 aa12.33□□□□□ -0.44
SRGAP3-201ENST00000360413 DPH7Q9BTV6 452 aa12.33□□□□□ -0.44
SRGAP3-201ENST00000360413 ZNF728P0DKX0 622 aa12.33□□□□□ -0.44
SRGAP3-201ENST00000360413 CCR6P51684 374 aa12.33□□□□□ -0.44
SRGAP3-201ENST00000360413 NAGSQ8N159 534 aa12.33□□□□□ -0.44
SRGAP3-201ENST00000360413 SEC22CQ9BRL7 303 aa12.33□□□□□ -0.44
SRGAP3-201ENST00000360413 TMEM59Q9BXS4 323 aa12.33□□□□□ -0.44
SRGAP3-201ENST00000360413 PLIN4Q96Q06 1357 aa12.33□□□□□ -0.44
SRGAP3-201ENST00000360413 MROH6A6NGR9 719 aa12.33□□□□□ -0.44
SRGAP3-201ENST00000360413 MCRIP1C9JLW8 97 aa12.33□□□□□ -0.44
SRGAP3-201ENST00000360413 PLRG1O43660 514 aaKnown RBP12.33□□□□□ -0.44
SRGAP3-201ENST00000360413 HNF1AP20823 631 aa12.33□□□□□ -0.44
SRGAP3-201ENST00000360413 TRA2BP62995 288 aaKnown RBP12.33□□□□□ -0.44
SRGAP3-201ENST00000360413 KCTD11Q693B1 232 aa12.33□□□□□ -0.44
SRGAP3-201ENST00000360413 DPPA4Q7L190 304 aa12.33□□□□□ -0.44
SRGAP3-201ENST00000360413 GPR26Q8NDV2 337 aa12.33□□□□□ -0.44
SRGAP3-201ENST00000360413 OR56B1Q8NGI3 324 aa12.33□□□□□ -0.44
SRGAP3-201ENST00000360413 GSX2Q9BZM3 304 aa12.33□□□□□ -0.44
SRGAP3-201ENST00000360413 C1GALT1Q9NS00 363 aa12.33□□□□□ -0.44
SRGAP3-201ENST00000360413 SLC2A8Q9NY64 477 aa12.33□□□□□ -0.44
SRGAP3-201ENST00000360413 NTF3P20783 257 aa12.33□□□□□ -0.44
SRGAP3-201ENST00000360413 CAMK2BQ13554 666 aa12.33□□□□□ -0.44
SRGAP3-201ENST00000360413 RPL3LQ92901 407 aaKnown RBP12.33□□□□□ -0.44
SRGAP3-201ENST00000360413 SCLYQ96I15 445 aa12.33□□□□□ -0.44
SRGAP3-201ENST00000360413 ZDHHC11Q9H8X9 412 aa12.33□□□□□ -0.44
SRGAP3-201ENST00000360413 GABRR3A8MPY1 467 aa12.33□□□□□ -0.44
SRGAP3-201ENST00000360413 SOCS6O14544 535 aa12.33□□□□□ -0.44
SRGAP3-201ENST00000360413 DVL1O14640 695 aa12.33□□□□□ -0.44
SRGAP3-201ENST00000360413 RNGTTO60942 597 aaKnown RBP12.33□□□□□ -0.44
SRGAP3-201ENST00000360413 GSTP1P09211 210 aaKnown RBP12.33□□□□□ -0.44
SRGAP3-201ENST00000360413 AHRP35869 848 aa12.33□□□□□ -0.44
SRGAP3-201ENST00000360413 DVL1P1P54792 670 aaPredicted RBP12.33□□□□□ -0.44
SRGAP3-201ENST00000360413 NR0B2Q15466 257 aa12.33□□□□□ -0.44
SRGAP3-201ENST00000360413 OR13C9Q8NGT0 318 aa12.33□□□□□ -0.44
SRGAP3-201ENST00000360413 NXF5Q9H1B4 397 aaKnown RBP12.33□□□□□ -0.44
SRGAP3-201ENST00000360413 SEMA4GQ9NTN9 838 aa12.33□□□□□ -0.44
SRGAP3-201ENST00000360413 ACTL7AQ9Y615 435 aa12.33□□□□□ -0.44
SRGAP3-201ENST00000360413 LEFTY1O75610 366 aa12.33□□□□□ -0.44
SRGAP3-201ENST00000360413 C1QBP02746 253 aa12.33□□□□□ -0.44
SRGAP3-201ENST00000360413 COL9A3Q14050 684 aaPredicted RBP12.33□□□□□ -0.44
SRGAP3-201ENST00000360413 SYT6Q5T7P8 510 aaPredicted RBP12.33□□□□□ -0.44
SRGAP3-201ENST00000360413 TMEM217Q8N7C4 229 aa12.33□□□□□ -0.44
SRGAP3-201ENST00000360413 GGHQ92820 318 aa12.33□□□□□ -0.44
SRGAP3-201ENST00000360413 DOCK7Q96N67 2140 aa12.33□□□□□ -0.44
SRGAP3-201ENST00000360413 CEP290O15078 2479 aa12.32□□□□□ -0.44
SRGAP3-201ENST00000360413 PRAMEF26H0Y7S4 382 aa12.32□□□□□ -0.44
SRGAP3-201ENST00000360413 H3F3AP84243 136 aa12.32□□□□□ -0.44
SRGAP3-201ENST00000360413 ACSM1Q08AH1 577 aa12.32□□□□□ -0.44
SRGAP3-201ENST00000360413 MEX3DQ86XN8 651 aaKnown RBP12.32□□□□□ -0.44
SRGAP3-201ENST00000360413 TMEM18Q96B42 140 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms