RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 CORINQ9Y5Q5 1042 aa12.49□□□□□ -0.41
PDLIM5-203ENST00000359265 BSNQ9UPA5 3926 aa12.48□□□□□ -0.41
PDLIM5-203ENST00000359265 A0A0G2JMM0 328 aa12.48□□□□□ -0.41
PDLIM5-203ENST00000359265 A0A1W2PPB8 328 aa12.48□□□□□ -0.41
PDLIM5-203ENST00000359265 A0A1W2PRS3 328 aa12.48□□□□□ -0.41
PDLIM5-203ENST00000359265 IRGMA1A4Y4 181 aa12.48□□□□□ -0.41
PDLIM5-203ENST00000359265 DPPA5A6NC42 116 aa12.48□□□□□ -0.41
PDLIM5-203ENST00000359265 OR5H15A6NDH6 313 aa12.48□□□□□ -0.41
PDLIM5-203ENST00000359265 A6NHS1 94 aa12.48□□□□□ -0.41
PDLIM5-203ENST00000359265 LRRC3CA6NJW4 275 aa12.48□□□□□ -0.41
PDLIM5-203ENST00000359265 A6NL46 340 aa12.48□□□□□ -0.41
PDLIM5-203ENST00000359265 KIR3DP1A8MWS1 328 aa12.48□□□□□ -0.41
PDLIM5-203ENST00000359265 SHISA8B8ZZ34 492 aa12.48□□□□□ -0.41
PDLIM5-203ENST00000359265 BLOC1S5-TXNDC5H3BN57 136 aa12.48□□□□□ -0.41
PDLIM5-203ENST00000359265 ARPC3O15145 178 aa12.48□□□□□ -0.41
PDLIM5-203ENST00000359265 PRODHO43272 600 aa12.48□□□□□ -0.41
PDLIM5-203ENST00000359265 NEURL1O76050 574 aa12.48□□□□□ -0.41
PDLIM5-203ENST00000359265 F10P00742 488 aa12.48□□□□□ -0.41
PDLIM5-203ENST00000359265 HTR1AP08908 422 aa12.48□□□□□ -0.41
PDLIM5-203ENST00000359265 PEPDP12955 493 aa12.48□□□□□ -0.41
PDLIM5-203ENST00000359265 APEHP13798 732 aaKnown RBP12.48□□□□□ -0.41
PDLIM5-203ENST00000359265 PAICSP22234 425 aaKnown RBP12.48□□□□□ -0.41
PDLIM5-203ENST00000359265 TCEA1P23193 301 aaKnown RBP12.48□□□□□ -0.41
PDLIM5-203ENST00000359265 GRPRP30550 384 aa12.48□□□□□ -0.41
PDLIM5-203ENST00000359265 AQP2P41181 271 aa12.48□□□□□ -0.41
PDLIM5-203ENST00000359265 ALDH3B2P48448 385 aa12.48□□□□□ -0.41
PDLIM5-203ENST00000359265 CLK1P49759 484 aaKnown RBP12.48□□□□□ -0.41
PDLIM5-203ENST00000359265 CCL11P51671 97 aa12.48□□□□□ -0.41
PDLIM5-203ENST00000359265 ZNF91Q05481 1191 aa12.48□□□□□ -0.41
PDLIM5-203ENST00000359265 RPL18Q07020 188 aaKnown RBP12.48□□□□□ -0.41
PDLIM5-203ENST00000359265 GLYR1Q49A26 553 aaPredicted RBP12.48□□□□□ -0.41
PDLIM5-203ENST00000359265 GXYLT1Q4G148 440 aa12.48□□□□□ -0.41
PDLIM5-203ENST00000359265 ALG10Q5BKT4 473 aa12.48□□□□□ -0.41
PDLIM5-203ENST00000359265 SLC35F1Q5T1Q4 408 aa12.48□□□□□ -0.41
PDLIM5-203ENST00000359265 C1QL3Q5VWW1 255 aa12.48□□□□□ -0.41
PDLIM5-203ENST00000359265 RAET1LQ5VY80 246 aa12.48□□□□□ -0.41
PDLIM5-203ENST00000359265 SLC6A19Q695T7 634 aa12.48□□□□□ -0.41
PDLIM5-203ENST00000359265 KCTD8Q6ZWB6 473 aa12.48□□□□□ -0.41
PDLIM5-203ENST00000359265 CXXC5Q7LFL8 322 aaKnown RBP12.48□□□□□ -0.41
PDLIM5-203ENST00000359265 PRSS48Q7RTY5 328 aa12.48□□□□□ -0.41
PDLIM5-203ENST00000359265 GID4Q8IVV7 300 aa12.48□□□□□ -0.41
PDLIM5-203ENST00000359265 SPARTQ8N0X7 666 aa12.48□□□□□ -0.41
PDLIM5-203ENST00000359265 STX19Q8N4C7 294 aa12.48□□□□□ -0.41
PDLIM5-203ENST00000359265 LRRC75AQ8NAA5 344 aa12.48□□□□□ -0.41
PDLIM5-203ENST00000359265 ATP6V1C2Q8NEY4 427 aa12.48□□□□□ -0.41
PDLIM5-203ENST00000359265 MOSPD2Q8NHP6 518 aa12.48□□□□□ -0.41
PDLIM5-203ENST00000359265 SNRNP27Q8WVK2 155 aaKnown RBP12.48□□□□□ -0.41
PDLIM5-203ENST00000359265 SGCDQ92629 289 aa12.48□□□□□ -0.41
PDLIM5-203ENST00000359265 GGHQ92820 318 aa12.48□□□□□ -0.41
PDLIM5-203ENST00000359265 RFKQ969G6 155 aa12.48□□□□□ -0.41
PDLIM5-203ENST00000359265 C5orf34Q96MH7 638 aa12.48□□□□□ -0.41
PDLIM5-203ENST00000359265 GNRHR2Q96P88 292 aa12.48□□□□□ -0.41
PDLIM5-203ENST00000359265 SIGLEC12Q96PQ1 595 aa12.48□□□□□ -0.41
PDLIM5-203ENST00000359265 AMBNQ9NP70 447 aa12.48□□□□□ -0.41
PDLIM5-203ENST00000359265 NRIP3Q9NQ35 241 aa12.48□□□□□ -0.41
PDLIM5-203ENST00000359265 MRPL39Q9NYK5 338 aaKnown RBP12.48□□□□□ -0.41
PDLIM5-203ENST00000359265 H2AFY2Q9P0M6 372 aaPredicted RBP12.48□□□□□ -0.41
PDLIM5-203ENST00000359265 ERVK-18Q9QC07 812 aa12.48□□□□□ -0.41
PDLIM5-203ENST00000359265 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.48□□□□□ -0.41
PDLIM5-203ENST00000359265 KLF13Q9Y2Y9 288 aaPredicted RBP12.48□□□□□ -0.41
PDLIM5-203ENST00000359265 KCNMB2Q9Y691 235 aa12.48□□□□□ -0.41
PDLIM5-203ENST00000359265 UTP20O75691 2785 aaKnown RBP12.47□□□□□ -0.41
PDLIM5-203ENST00000359265 FTCDNL1E5RQL4 147 aa12.47□□□□□ -0.41
PDLIM5-203ENST00000359265 PRR23D1E9PI22 279 aaPredicted RBP12.47□□□□□ -0.41
PDLIM5-203ENST00000359265 H3BML4 177 aa12.47□□□□□ -0.41
PDLIM5-203ENST00000359265 IMPA2O14732 288 aa12.47□□□□□ -0.41
PDLIM5-203ENST00000359265 OR6A2O95222 327 aa12.47□□□□□ -0.41
PDLIM5-203ENST00000359265 MT-ND2P03891 347 aa12.47□□□□□ -0.41
PDLIM5-203ENST00000359265 CDK1P06493 297 aa12.47□□□□□ -0.41
PDLIM5-203ENST00000359265 CD14P08571 375 aa12.47□□□□□ -0.41
PDLIM5-203ENST00000359265 TSPAN19P0C672 248 aa12.47□□□□□ -0.41
PDLIM5-203ENST00000359265 PRR23D2P0DMB1 279 aaPredicted RBP12.47□□□□□ -0.41
PDLIM5-203ENST00000359265 DBTP11182 482 aaKnown RBP12.47□□□□□ -0.41
PDLIM5-203ENST00000359265 SLC15A1P46059 708 aa12.47□□□□□ -0.41
PDLIM5-203ENST00000359265 CDH11P55287 796 aa12.47□□□□□ -0.41
PDLIM5-203ENST00000359265 CTXN1P60606 82 aa12.47□□□□□ -0.41
PDLIM5-203ENST00000359265 GPR85P60893 370 aa12.47□□□□□ -0.41
PDLIM5-203ENST00000359265 MVKQ03426 396 aa12.47□□□□□ -0.41
PDLIM5-203ENST00000359265 PIGFQ07326 219 aa12.47□□□□□ -0.41
PDLIM5-203ENST00000359265 PMS2P3Q13401 168 aa12.47□□□□□ -0.41
PDLIM5-203ENST00000359265 TOMM20Q15388 145 aa12.47□□□□□ -0.41
PDLIM5-203ENST00000359265 NXNL2Q5VZ03 156 aa12.47□□□□□ -0.41
PDLIM5-203ENST00000359265 SPINK14Q6IE38 97 aa12.47□□□□□ -0.41
PDLIM5-203ENST00000359265 IGFN1Q86VF2 1251 aa12.47□□□□□ -0.41
PDLIM5-203ENST00000359265 SCAIQ8N9R8 606 aa12.47□□□□□ -0.41
PDLIM5-203ENST00000359265 MDS2Q8NDY4 140 aa12.47□□□□□ -0.41
PDLIM5-203ENST00000359265 OR2M7Q8NG81 312 aa12.47□□□□□ -0.41
PDLIM5-203ENST00000359265 PIGQQ9BRB3 760 aa12.47□□□□□ -0.41
PDLIM5-203ENST00000359265 RHNO1Q9BSD3 238 aa12.47□□□□□ -0.41
PDLIM5-203ENST00000359265 KATNB1Q9BVA0 655 aa12.47□□□□□ -0.41
PDLIM5-203ENST00000359265 ZFP64Q9NPA5 681 aa12.47□□□□□ -0.41
PDLIM5-203ENST00000359265 HINT3Q9NQE9 182 aaKnown RBP12.47□□□□□ -0.41
PDLIM5-203ENST00000359265 DEPPQ9NTK1 212 aa12.47□□□□□ -0.41
PDLIM5-203ENST00000359265 ALKBH4Q9NXW9 302 aa12.47□□□□□ -0.41
PDLIM5-203ENST00000359265 PLA2G3Q9NZ20 509 aa12.47□□□□□ -0.41
PDLIM5-203ENST00000359265 B4GALT7Q9UBV7 327 aa12.47□□□□□ -0.41
PDLIM5-203ENST00000359265 IER3IP1Q9Y5U9 82 aa12.47□□□□□ -0.41
PDLIM5-203ENST00000359265 M0R082 166 aa12.46□□□□□ -0.41
PDLIM5-203ENST00000359265 ZIC3O60481 467 aa12.46□□□□□ -0.41
PDLIM5-203ENST00000359265 FZD7O75084 574 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms