RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 UNC119BA6NIH7 251 aa11.53□□□□□ -0.56
GGPS1-202ENST00000358966 SMLR1H3BR10 107 aa11.53□□□□□ -0.56
GGPS1-202ENST00000358966 SCDO00767 359 aa11.53□□□□□ -0.56
GGPS1-202ENST00000358966 HCRTR2O43614 444 aa11.53□□□□□ -0.56
GGPS1-202ENST00000358966 IL33O95760 270 aa11.53□□□□□ -0.56
GGPS1-202ENST00000358966 GYPBP06028 91 aa11.53□□□□□ -0.56
GGPS1-202ENST00000358966 SYPP08247 313 aa11.53□□□□□ -0.56
GGPS1-202ENST00000358966 GPR143P51810 404 aa11.53□□□□□ -0.56
GGPS1-202ENST00000358966 GBX2P52951 348 aaPredicted RBP11.53□□□□□ -0.56
GGPS1-202ENST00000358966 EFNB1P98172 346 aa11.53□□□□□ -0.56
GGPS1-202ENST00000358966 PRKCDQ05655 676 aa11.53□□□□□ -0.56
GGPS1-202ENST00000358966 SQSTM1Q13501 440 aa11.53□□□□□ -0.56
GGPS1-202ENST00000358966 PGGHGQ32M88 737 aa11.53□□□□□ -0.56
GGPS1-202ENST00000358966 PLAG1Q6DJT9 500 aa11.53□□□□□ -0.56
GGPS1-202ENST00000358966 PAPD4Q6PIY7 484 aaKnown RBP11.53□□□□□ -0.56
GGPS1-202ENST00000358966 RABEPKQ7Z6M1 372 aa11.53□□□□□ -0.56
GGPS1-202ENST00000358966 OR8H2Q8N162 312 aa11.53□□□□□ -0.56
GGPS1-202ENST00000358966 LINC00471Q8N535 108 aa11.53□□□□□ -0.56
GGPS1-202ENST00000358966 OR4F15Q8NGB8 312 aa11.53□□□□□ -0.56
GGPS1-202ENST00000358966 OR14A16Q8NHC5 309 aa11.53□□□□□ -0.56
GGPS1-202ENST00000358966 TMCO6Q96DC7 493 aa11.53□□□□□ -0.56
GGPS1-202ENST00000358966 TRMT61AQ96FX7 289 aaKnown RBP11.53□□□□□ -0.56
GGPS1-202ENST00000358966 CRB3Q9BUF7 120 aa11.53□□□□□ -0.56
GGPS1-202ENST00000358966 RERGLQ9H628 205 aa11.53□□□□□ -0.56
GGPS1-202ENST00000358966 HINT3Q9NQE9 182 aaKnown RBP11.53□□□□□ -0.56
GGPS1-202ENST00000358966 UBQLN4Q9NRR5 601 aa11.53□□□□□ -0.56
GGPS1-202ENST00000358966 CDH10Q9Y6N8 788 aa11.53□□□□□ -0.56
GGPS1-202ENST00000358966 B4DXG7 233 aa11.53□□□□□ -0.56
GGPS1-202ENST00000358966 GTPBP1O00178 669 aaKnown RBP11.53□□□□□ -0.56
GGPS1-202ENST00000358966 NTN3O00634 580 aaPredicted RBP11.53□□□□□ -0.56
GGPS1-202ENST00000358966 SURF4O15260 269 aa11.53□□□□□ -0.56
GGPS1-202ENST00000358966 NOS3P29474 1203 aa11.53□□□□□ -0.56
GGPS1-202ENST00000358966 FBXW4P57775 412 aa11.53□□□□□ -0.56
GGPS1-202ENST00000358966 ZNF117Q03924 483 aa11.53□□□□□ -0.56
GGPS1-202ENST00000358966 SKP2Q13309 424 aa11.53□□□□□ -0.56
GGPS1-202ENST00000358966 TBCEQ15813 527 aaPredicted RBP11.53□□□□□ -0.56
GGPS1-202ENST00000358966 PDSS1Q5T2R2 415 aa11.53□□□□□ -0.56
GGPS1-202ENST00000358966 OR2G6Q5TZ20 316 aa11.53□□□□□ -0.56
GGPS1-202ENST00000358966 FNDC7Q5VTL7 733 aa11.53□□□□□ -0.56
GGPS1-202ENST00000358966 ZNF613Q6PF04 617 aa11.53□□□□□ -0.56
GGPS1-202ENST00000358966 PAMR1Q6UXH9 720 aa11.53□□□□□ -0.56
GGPS1-202ENST00000358966 SLC29A4Q7RTT9 530 aa11.53□□□□□ -0.56
GGPS1-202ENST00000358966 KRT77Q7Z794 578 aa11.53□□□□□ -0.56
GGPS1-202ENST00000358966 TCTE3Q8IZS6 198 aa11.53□□□□□ -0.56
GGPS1-202ENST00000358966 BMPERQ8N8U9 685 aa11.53□□□□□ -0.56
GGPS1-202ENST00000358966 C3orf49Q96BT1 292 aa11.53□□□□□ -0.56
GGPS1-202ENST00000358966 SDHCQ99643 169 aaPredicted RBP11.53□□□□□ -0.56
GGPS1-202ENST00000358966 NPAS1Q99742 590 aa11.53□□□□□ -0.56
GGPS1-202ENST00000358966 ENAMQ9NRM1 1142 aa11.53□□□□□ -0.56
GGPS1-202ENST00000358966 RPS6KB2Q9UBS0 482 aa11.53□□□□□ -0.56
GGPS1-202ENST00000358966 SPATA2Q9UM82 520 aa11.53□□□□□ -0.56
GGPS1-202ENST00000358966 ADAM18Q9Y3Q7 739 aa11.53□□□□□ -0.56
GGPS1-202ENST00000358966 FRYQ5TBA9 3013 aa11.53□□□□□ -0.56
GGPS1-202ENST00000358966 MUC6Q6W4X9 2439 aa11.53□□□□□ -0.56
GGPS1-202ENST00000358966 LOC100506127A0A0U1RQW1 187 aa11.52□□□□□ -0.56
GGPS1-202ENST00000358966 EFCAB9A8MZ26 197 aa11.52□□□□□ -0.56
GGPS1-202ENST00000358966 PPP1R3DO95685 299 aa11.52□□□□□ -0.56
GGPS1-202ENST00000358966 NUDT14O95848 222 aa11.52□□□□□ -0.56
GGPS1-202ENST00000358966 GADD45AP24522 165 aa11.52□□□□□ -0.56
GGPS1-202ENST00000358966 RNF4P78317 190 aa11.52□□□□□ -0.56
GGPS1-202ENST00000358966 IRF3Q14653 427 aa11.52□□□□□ -0.56
GGPS1-202ENST00000358966 C4orf46Q504U0 113 aa11.52□□□□□ -0.56
GGPS1-202ENST00000358966 PLBD1Q6P4A8 553 aa11.52□□□□□ -0.56
GGPS1-202ENST00000358966 BMP8AQ7Z5Y6 402 aa11.52□□□□□ -0.56
GGPS1-202ENST00000358966 OAFQ86UD1 273 aa11.52□□□□□ -0.56
GGPS1-202ENST00000358966 JAZF1Q86VZ6 243 aa11.52□□□□□ -0.56
GGPS1-202ENST00000358966 CPOQ8IVL8 374 aa11.52□□□□□ -0.56
GGPS1-202ENST00000358966 OR2T33Q8NG76 320 aa11.52□□□□□ -0.56
GGPS1-202ENST00000358966 TMEM163Q8TC26 289 aa11.52□□□□□ -0.56
GGPS1-202ENST00000358966 DNAJA4Q8WW22 397 aaPredicted RBP11.52□□□□□ -0.56
GGPS1-202ENST00000358966 WDR77Q9BQA1 342 aaPredicted RBP11.52□□□□□ -0.56
GGPS1-202ENST00000358966 IFT27Q9BW83 186 aa11.52□□□□□ -0.56
GGPS1-202ENST00000358966 ULBP3Q9BZM4 244 aa11.52□□□□□ -0.56
GGPS1-202ENST00000358966 MS4A7Q9GZW8 240 aaPredicted RBP11.52□□□□□ -0.56
GGPS1-202ENST00000358966 OR51E2Q9H255 320 aa11.52□□□□□ -0.56
GGPS1-202ENST00000358966 GALNT9Q9HCQ5 603 aa11.52□□□□□ -0.56
GGPS1-202ENST00000358966 ING3Q9NXR8 418 aa11.52□□□□□ -0.56
GGPS1-202ENST00000358966 SIGLEC7Q9Y286 467 aa11.52□□□□□ -0.56
GGPS1-202ENST00000358966 COL5A1P20908 1838 aaPredicted RBP11.52□□□□□ -0.56
GGPS1-202ENST00000358966 MPZL2O60487 215 aa11.52□□□□□ -0.57
GGPS1-202ENST00000358966 C1QBP02746 253 aa11.52□□□□□ -0.57
GGPS1-202ENST00000358966 ITPKBP27987 946 aa11.52□□□□□ -0.57
GGPS1-202ENST00000358966 GALNSP34059 522 aa11.52□□□□□ -0.57
GGPS1-202ENST00000358966 ETV5P41161 510 aa11.52□□□□□ -0.57
GGPS1-202ENST00000358966 RPS5P46782 204 aaKnown RBP11.52□□□□□ -0.57
GGPS1-202ENST00000358966 EMP2P54851 167 aa11.52□□□□□ -0.57
GGPS1-202ENST00000358966 FHL1Q13642 323 aa11.52□□□□□ -0.57
GGPS1-202ENST00000358966 ARMCX4Q5H9R4 360 aa11.52□□□□□ -0.57
GGPS1-202ENST00000358966 FAM26EQ8N5C1 309 aa11.52□□□□□ -0.57
GGPS1-202ENST00000358966 OR52I1Q8NGK6 324 aa11.52□□□□□ -0.57
GGPS1-202ENST00000358966 HS6ST2Q96MM7 605 aa11.52□□□□□ -0.57
GGPS1-202ENST00000358966 NIPAL2Q9H841 368 aa11.52□□□□□ -0.57
GGPS1-202ENST00000358966 COA4Q9NYJ1 87 aa11.52□□□□□ -0.57
GGPS1-202ENST00000358966 B3GALT1Q9Y5Z6 326 aa11.52□□□□□ -0.57
GGPS1-202ENST00000358966 IGLV3-12A0A075B6K2 115 aa11.51□□□□□ -0.57
GGPS1-202ENST00000358966 TRBV11-1A0A0K0K1C0 115 aa11.51□□□□□ -0.57
GGPS1-202ENST00000358966 FMO6PO60774 539 aa11.51□□□□□ -0.57
GGPS1-202ENST00000358966 SNX4O95219 450 aa11.51□□□□□ -0.57
GGPS1-202ENST00000358966 HBQ1P09105 142 aa11.51□□□□□ -0.57
GGPS1-202ENST00000358966 STAT5AP42229 794 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms