RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 ZFP90Q8TF47 636 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 OR11A1Q9GZK7 315 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 LHX3Q9UBR4 397 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 KLHL21Q9UJP4 597 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 FAM96BQ9Y3D0 163 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 A0A0G2JMP0 313 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 TSPAN11A1L157 253 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 SURF4O15260 269 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 ITGAMP11215 1152 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 PRSS3P35030 304 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 SLC19A1P41440 591 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 CEBPDP49716 269 aaPredicted RBP6.79□□□□□ -1.32
VPS13A-202ENST00000357409 ASCL1P50553 236 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 PDZD11Q5EBL8 140 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 NATD1Q8N6N6 113 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 OR4M2Q8NGB6 313 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 PHOSPHO2Q8TCD6 241 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 LINC01599Q8WXQ3 324 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 SLC35A4Q96G79 324 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 CHST8Q9H2A9 424 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 SLC6A14Q9UN76 642 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 BOLA1Q9Y3E2 137 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 SDCBPO00560 298 aaPredicted RBP6.79□□□□□ -1.32
VPS13A-202ENST00000357409 TSPAN15O95858 294 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 HADHBP55084 474 aaKnown RBP6.79□□□□□ -1.32
VPS13A-202ENST00000357409 TMEM44Q2T9K0 475 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 ARHGAP11AQ6P4F7 1023 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 BLOC1S3Q6QNY0 202 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 PGAP1Q75T13 922 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 PDZD3Q86UT5 571 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 CHCHD4Q8N4Q1 142 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 CNOT9Q92600 299 aaKnown RBP6.79□□□□□ -1.32
VPS13A-202ENST00000357409 RDH5Q92781 318 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 RPL3LQ92901 407 aaKnown RBP6.79□□□□□ -1.32
VPS13A-202ENST00000357409 FOXRED1Q96CU9 486 aaPredicted RBP6.79□□□□□ -1.32
VPS13A-202ENST00000357409 DAZAP1Q96EP5 407 aaKnown RBP6.79□□□□□ -1.32
VPS13A-202ENST00000357409 ZNF597Q96LX8 424 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 SLC6A20Q9NP91 592 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 PEAK1Q9H792 1746 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 MCRIP1C9JLW8 97 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 G3V2L1 256 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 PHF1O43189 567 aaPredicted RBP6.79□□□□□ -1.32
VPS13A-202ENST00000357409 RP2O75695 350 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 PAX6P26367 422 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 IMPA1P29218 277 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 AKR1C1Q04828 323 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 CAMKMTQ7Z624 323 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 THNSL2Q86YJ6 484 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 BPIFB2Q8N4F0 458 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 CDRT4Q8N9R6 151 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 RAB2BQ8WUD1 216 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 ZBTB8AQ96BR9 441 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 RNF167Q9H6Y7 350 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 NOTOA8MTQ0 251 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 STMND1H3BQB6 276 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 CLDN1O95832 211 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 HIST1H1TP22492 207 aaPredicted RBP6.79□□□□□ -1.32
VPS13A-202ENST00000357409 NUDT1P36639 197 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 APOOLQ6UXV4 268 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 RPS19BP1Q86WX3 136 aaKnown RBP6.79□□□□□ -1.32
VPS13A-202ENST00000357409 EXD3Q8N9H8 876 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 OR11G2Q8NGC1 345 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 CHODLQ9H9P2 273 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 SEMA4GQ9NTN9 838 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 PIGLQ9Y2B2 252 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 YBX2Q9Y2T7 364 aaKnown RBP6.79□□□□□ -1.32
VPS13A-202ENST00000357409 COL2A1P02458 1487 aaPredicted RBP6.79□□□□□ -1.32
VPS13A-202ENST00000357409 METTL12A8MUP2 240 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 GPR75O95800 540 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 IL2RAP01589 272 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 FDXRP22570 491 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 NFATC3Q12968 1075 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 ATG9BQ674R7 924 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 PXKQ7Z7A4 578 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 DTWD1Q8N5C7 304 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 OR10AD1Q8NGE0 317 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 BTBD2Q9BX70 525 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 CACNG6Q9BXT2 260 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 NME7Q9Y5B8 376 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 ENPP4Q9Y6X5 453 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 ARHGAP23Q9P227 1491 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 E9PI62 339 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 TCAPO15273 167 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 SORDQ00796 357 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 COL13A1Q5TAT6 717 aaPredicted RBP6.79□□□□□ -1.32
VPS13A-202ENST00000357409 C20orf196Q8IYI0 205 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 SLC16A11Q8NCK7 471 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 CXorf36Q9H7Y0 433 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 MTCH1Q9NZJ7 389 aa6.79□□□□□ -1.32
VPS13A-202ENST00000357409 MED19A0JLT2 244 aaPredicted RBP6.78□□□□□ -1.32
VPS13A-202ENST00000357409 CD63P08962 238 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 MAPK3P27361 379 aaPredicted RBP6.78□□□□□ -1.32
VPS13A-202ENST00000357409 ELLP55199 621 aaPredicted RBP6.78□□□□□ -1.32
VPS13A-202ENST00000357409 ZNF816Q0VGE8 651 aaPredicted RBP6.78□□□□□ -1.32
VPS13A-202ENST00000357409 CDK5R2Q13319 367 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 TNK1Q13470 666 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 C10orf62Q5T681 223 aaPredicted RBP6.78□□□□□ -1.32
VPS13A-202ENST00000357409 TMEM207Q6UWW9 146 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 TMPRSS11FQ6ZWK6 438 aa6.78□□□□□ -1.32
VPS13A-202ENST00000357409 GTPBP8Q8N3Z3 284 aaPredicted RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms