RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 APOOLQ6UXV4 268 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 ZNF546Q86UE3 836 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 CHTF18Q8WVB6 975 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 BSCL2Q96G97 398 aaPredicted RBP6.01□□□□□ -1.45
UPF2-201ENST00000356352 PRDM9Q9NQV7 894 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 MEIOCA2RUB1 952 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 MEIS3P1A6NDR6 274 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 AP1G1O43747 822 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 TUSC2O75896 110 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 HLA-HP01893 362 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 SNRNP70P08621 437 aaKnown RBP6.01□□□□□ -1.45
UPF2-201ENST00000356352 SLC2A1P11166 492 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 TCN2P20062 427 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 DPP4P27487 766 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 OR1D4P47884 311 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 CTSCP53634 463 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 DMWDQ09019 674 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 OR8B8Q15620 311 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 TMEM41BQ5BJD5 291 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 FRMPD2BQ6IN97 320 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 SLC35G3Q8N808 338 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 CMTM2Q8TAZ6 248 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 SLC25A43Q8WUT9 341 aaPredicted RBP6.01□□□□□ -1.45
UPF2-201ENST00000356352 GGHQ92820 318 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 EDAQ92838 391 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 INSM2Q96T92 566 aaPredicted RBP6.01□□□□□ -1.45
UPF2-201ENST00000356352 TXLNGYQ9BZA5 131 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 ACKR4Q9NPB9 350 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 MUTYHQ9UIF7 546 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 HS3ST3A1Q9Y663 406 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 PRSS21Q9Y6M0 314 aa6.01□□□□□ -1.45
UPF2-201ENST00000356352 SIPA1L2Q9P2F8 1722 aaPredicted RBP6□□□□□ -1.45
UPF2-201ENST00000356352 TMED7-TICAM2A0A0A6YYA0 188 aa6□□□□□ -1.45
UPF2-201ENST00000356352 AGPAT2O15120 278 aa6□□□□□ -1.45
UPF2-201ENST00000356352 SMAD6O43541 496 aaKnown RBP6□□□□□ -1.45
UPF2-201ENST00000356352 HCRTR1O43613 425 aa6□□□□□ -1.45
UPF2-201ENST00000356352 CNMDO75829 334 aa6□□□□□ -1.45
UPF2-201ENST00000356352 OR7C1O76099 320 aaPredicted RBP6□□□□□ -1.45
UPF2-201ENST00000356352 HOXB5P09067 269 aa6□□□□□ -1.45
UPF2-201ENST00000356352 OR8U8P0C7N1 319 aa6□□□□□ -1.45
UPF2-201ENST00000356352 AADACP22760 399 aa6□□□□□ -1.45
UPF2-201ENST00000356352 NFYBP25208 207 aa6□□□□□ -1.45
UPF2-201ENST00000356352 MAOBP27338 520 aa6□□□□□ -1.45
UPF2-201ENST00000356352 P2RX1P51575 399 aa6□□□□□ -1.45
UPF2-201ENST00000356352 FAM189BP81408 668 aa6□□□□□ -1.45
UPF2-201ENST00000356352 ACSM1Q08AH1 577 aa6□□□□□ -1.45
UPF2-201ENST00000356352 SHISA6Q6ZSJ9 500 aa6□□□□□ -1.45
UPF2-201ENST00000356352 PLPP5Q8NEB5 264 aa6□□□□□ -1.45
UPF2-201ENST00000356352 OR51A2Q8NGJ7 313 aa6□□□□□ -1.45
UPF2-201ENST00000356352 OR1S2Q8NGQ3 325 aa6□□□□□ -1.45
UPF2-201ENST00000356352 OR2A12Q8NGT7 310 aa6□□□□□ -1.45
UPF2-201ENST00000356352 TMEM40Q8WWA1 233 aa6□□□□□ -1.45
UPF2-201ENST00000356352 INTS12Q96CB8 462 aaKnown RBP6□□□□□ -1.45
UPF2-201ENST00000356352 SORT1Q99523 831 aa6□□□□□ -1.45
UPF2-201ENST00000356352 DHRS4Q9BTZ2 278 aa6□□□□□ -1.45
UPF2-201ENST00000356352 ABHD6Q9BV23 337 aa6□□□□□ -1.45
UPF2-201ENST00000356352 NOX4Q9NPH5 578 aa6□□□□□ -1.45
UPF2-201ENST00000356352 SAGE1Q9NXZ1 904 aa6□□□□□ -1.45
UPF2-201ENST00000356352 DNMT3BQ9UBC3 853 aaKnown RBP6□□□□□ -1.45
UPF2-201ENST00000356352 LHX3Q9UBR4 397 aa6□□□□□ -1.45
UPF2-201ENST00000356352 YARS2Q9Y2Z4 477 aaKnown RBP6□□□□□ -1.45
UPF2-201ENST00000356352 TMED7Q9Y3B3 224 aa6□□□□□ -1.45
UPF2-201ENST00000356352 DNAJC25-GNG10A0A024R161 153 aa6□□□□□ -1.45
UPF2-201ENST00000356352 TLCD2A6NGC4 264 aa6□□□□□ -1.45
UPF2-201ENST00000356352 CACNG3O60359 315 aa6□□□□□ -1.45
UPF2-201ENST00000356352 FZD7O75084 574 aa6□□□□□ -1.45
UPF2-201ENST00000356352 DFFBO76075 338 aa6□□□□□ -1.45
UPF2-201ENST00000356352 UTS2O95399 124 aa6□□□□□ -1.45
UPF2-201ENST00000356352 ZIC2O95409 532 aaPredicted RBP6□□□□□ -1.45
UPF2-201ENST00000356352 SLC35E2P0CK97 266 aa6□□□□□ -1.45
UPF2-201ENST00000356352 ELK1P19419 428 aa6□□□□□ -1.45
UPF2-201ENST00000356352 IVDP26440 423 aa6□□□□□ -1.45
UPF2-201ENST00000356352 RAB13P51153 203 aa6□□□□□ -1.45
UPF2-201ENST00000356352 PLK5Q496M5 336 aa6□□□□□ -1.45
UPF2-201ENST00000356352 HIST2H3PS2Q5TEC6 136 aa6□□□□□ -1.45
UPF2-201ENST00000356352 FAM199XQ6PEV8 388 aaPredicted RBP6□□□□□ -1.45
UPF2-201ENST00000356352 GIMAP1Q8WWP7 306 aa6□□□□□ -1.45
UPF2-201ENST00000356352 OR1E3Q8WZA6 343 aa6□□□□□ -1.45
UPF2-201ENST00000356352 HHIPL1Q96JK4 782 aa6□□□□□ -1.45
UPF2-201ENST00000356352 ALG12Q9BV10 488 aa6□□□□□ -1.45
UPF2-201ENST00000356352 ATP13A2Q9NQ11 1180 aa6□□□□□ -1.45
UPF2-201ENST00000356352 SLC22A11Q9NSA0 550 aa6□□□□□ -1.45
UPF2-201ENST00000356352 ZNF732B4DXR9 585 aa6□□□□□ -1.45
UPF2-201ENST00000356352 BET1O15155 118 aa6□□□□□ -1.45
UPF2-201ENST00000356352 NXPH2O95156 264 aa6□□□□□ -1.45
UPF2-201ENST00000356352 APOA2P02652 100 aa6□□□□□ -1.45
UPF2-201ENST00000356352 ADRA1AP35348 466 aa6□□□□□ -1.45
UPF2-201ENST00000356352 RPL35P42766 123 aaKnown RBP6□□□□□ -1.45
UPF2-201ENST00000356352 SIRPAP78324 504 aa6□□□□□ -1.45
UPF2-201ENST00000356352 GABREP78334 506 aa6□□□□□ -1.45
UPF2-201ENST00000356352 SQSTM1Q13501 440 aa6□□□□□ -1.45
UPF2-201ENST00000356352 KCTD11Q693B1 232 aa6□□□□□ -1.45
UPF2-201ENST00000356352 PRICKLE2Q7Z3G6 844 aa6□□□□□ -1.45
UPF2-201ENST00000356352 ZNF321PQ8N8H1 164 aa6□□□□□ -1.45
UPF2-201ENST00000356352 KIRREL1Q96J84 757 aa6□□□□□ -1.45
UPF2-201ENST00000356352 SLC46A2Q9BY10 475 aa6□□□□□ -1.45
UPF2-201ENST00000356352 HAPLN2Q9GZV7 340 aa6□□□□□ -1.45
UPF2-201ENST00000356352 SLC39A9Q9NUM3 307 aa6□□□□□ -1.45
UPF2-201ENST00000356352 HCFC1R1Q9NWW0 138 aa6□□□□□ -1.45
UPF2-201ENST00000356352 GFOD1Q9NXC2 390 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms