RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 CTSL3PQ5NE16 218 aa13.84□□□□□ -0.19
LMX1B-201ENST00000355497 LYSMD4Q5XG99 296 aa13.84□□□□□ -0.19
LMX1B-201ENST00000355497 TTC9BQ8N6N2 239 aa13.84□□□□□ -0.19
LMX1B-201ENST00000355497 ZNF454Q8N9F8 522 aa13.84□□□□□ -0.19
LMX1B-201ENST00000355497 HHIPQ96QV1 700 aa13.84□□□□□ -0.19
LMX1B-201ENST00000355497 OR11A1Q9GZK7 315 aa13.84□□□□□ -0.19
LMX1B-201ENST00000355497 MED20Q9H944 212 aa13.84□□□□□ -0.19
LMX1B-201ENST00000355497 LHX6Q9UPM6 363 aa13.84□□□□□ -0.19
LMX1B-201ENST00000355497 SMAD6O43541 496 aaKnown RBP13.83□□□□□ -0.19
LMX1B-201ENST00000355497 DDAH2O95865 285 aa13.83□□□□□ -0.19
LMX1B-201ENST00000355497 EDN3P14138 238 aa13.83□□□□□ -0.19
LMX1B-201ENST00000355497 ANXA7P20073 488 aaKnown RBP13.83□□□□□ -0.19
LMX1B-201ENST00000355497 PSMB5P28074 263 aa13.83□□□□□ -0.19
LMX1B-201ENST00000355497 LAP3P28838 519 aa13.83□□□□□ -0.19
LMX1B-201ENST00000355497 HOXA11P31270 313 aaPredicted RBP13.83□□□□□ -0.19
LMX1B-201ENST00000355497 MTNR1BP49286 362 aa13.83□□□□□ -0.19
LMX1B-201ENST00000355497 PRLHRP49683 370 aa13.83□□□□□ -0.19
LMX1B-201ENST00000355497 SELPLGQ14242 412 aa13.83□□□□□ -0.19
LMX1B-201ENST00000355497 RAB35Q15286 201 aa13.83□□□□□ -0.19
LMX1B-201ENST00000355497 MRPL10Q7Z7H8 261 aaKnown RBP13.83□□□□□ -0.19
LMX1B-201ENST00000355497 SCD5Q86SK9 330 aa13.83□□□□□ -0.19
LMX1B-201ENST00000355497 TCEAL8Q8IYN2 117 aa13.83□□□□□ -0.19
LMX1B-201ENST00000355497 SEC22AQ96IW7 307 aa13.83□□□□□ -0.19
LMX1B-201ENST00000355497 SELENOIQ9C0D9 397 aa13.83□□□□□ -0.19
LMX1B-201ENST00000355497 HAPLN2Q9GZV7 340 aa13.83□□□□□ -0.19
LMX1B-201ENST00000355497 KCNIP2Q9NS61 270 aa13.83□□□□□ -0.19
LMX1B-201ENST00000355497 PURGQ9UJV8 347 aaKnown RBP13.83□□□□□ -0.19
LMX1B-201ENST00000355497 ADAM29Q9UKF5 820 aa13.83□□□□□ -0.19
LMX1B-201ENST00000355497 ARHGAP33O14559 1287 aa13.83□□□□□ -0.2
LMX1B-201ENST00000355497 OR10J4P0C629 311 aa13.83□□□□□ -0.2
LMX1B-201ENST00000355497 HNRNPA1L2Q32P51 320 aaKnown RBP13.83□□□□□ -0.2
LMX1B-201ENST00000355497 C5orf46Q6UWT4 87 aa13.83□□□□□ -0.2
LMX1B-201ENST00000355497 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.83□□□□□ -0.2
LMX1B-201ENST00000355497 PIANPQ8IYJ0 282 aa13.83□□□□□ -0.2
LMX1B-201ENST00000355497 OR13C9Q8NGT0 318 aa13.83□□□□□ -0.2
LMX1B-201ENST00000355497 CDCA3Q99618 268 aaPredicted RBP13.83□□□□□ -0.2
LMX1B-201ENST00000355497 OSGIN2Q9Y236 505 aa13.83□□□□□ -0.2
LMX1B-201ENST00000355497 MED1Q15648 1581 aaPredicted RBP13.83□□□□□ -0.2
LMX1B-201ENST00000355497 NSA2O95478 260 aaKnown RBP13.83□□□□□ -0.2
LMX1B-201ENST00000355497 AIFM1O95831 613 aa13.83□□□□□ -0.2
LMX1B-201ENST00000355497 METTL15P1P0C7V9 234 aa13.83□□□□□ -0.2
LMX1B-201ENST00000355497 GSK3AP49840 483 aa13.83□□□□□ -0.2
LMX1B-201ENST00000355497 RAB38P57729 211 aa13.83□□□□□ -0.2
LMX1B-201ENST00000355497 LPAL2Q16609 132 aa13.83□□□□□ -0.2
LMX1B-201ENST00000355497 GRAMD2AQ8IUY3 354 aa13.83□□□□□ -0.2
LMX1B-201ENST00000355497 LAX1Q8IWV1 398 aa13.83□□□□□ -0.2
LMX1B-201ENST00000355497 ZNF582Q96NG8 517 aaPredicted RBP13.83□□□□□ -0.2
LMX1B-201ENST00000355497 CLEC3BP05452 202 aa13.83□□□□□ -0.2
LMX1B-201ENST00000355497 OR2T7P0C7T2 308 aa13.83□□□□□ -0.2
LMX1B-201ENST00000355497 CEBPBP17676 345 aa13.83□□□□□ -0.2
LMX1B-201ENST00000355497 TNFRSF4P43489 277 aa13.83□□□□□ -0.2
LMX1B-201ENST00000355497 CSNK1DP48730 415 aa13.83□□□□□ -0.2
LMX1B-201ENST00000355497 CTSCP53634 463 aa13.83□□□□□ -0.2
LMX1B-201ENST00000355497 SIRPAP78324 504 aa13.83□□□□□ -0.2
LMX1B-201ENST00000355497 ZNF266Q14584 549 aa13.83□□□□□ -0.2
LMX1B-201ENST00000355497 Q6ZTK2 550 aa13.83□□□□□ -0.2
LMX1B-201ENST00000355497 NRARPQ7Z6K4 114 aa13.83□□□□□ -0.2
LMX1B-201ENST00000355497 OR2T27Q8NH04 317 aa13.83□□□□□ -0.2
LMX1B-201ENST00000355497 STT3BQ8TCJ2 826 aa13.83□□□□□ -0.2
LMX1B-201ENST00000355497 RNF170Q96K19 258 aa13.83□□□□□ -0.2
LMX1B-201ENST00000355497 KLF16Q9BXK1 252 aaPredicted RBP13.83□□□□□ -0.2
LMX1B-201ENST00000355497 TGIF2Q9GZN2 237 aa13.83□□□□□ -0.2
LMX1B-201ENST00000355497 SCG5P05408 212 aa13.82□□□□□ -0.2
LMX1B-201ENST00000355497 CLDN12P56749 244 aa13.82□□□□□ -0.2
LMX1B-201ENST00000355497 OR10K2Q6IF99 312 aa13.82□□□□□ -0.2
LMX1B-201ENST00000355497 SFXN4Q6P4A7 337 aa13.82□□□□□ -0.2
LMX1B-201ENST00000355497 ZNF595Q8IYB9 648 aa13.82□□□□□ -0.2
LMX1B-201ENST00000355497 PNPLA1Q8N8W4 532 aa13.82□□□□□ -0.2
LMX1B-201ENST00000355497 FAM122AQ96E09 287 aa13.82□□□□□ -0.2
LMX1B-201ENST00000355497 TOE1Q96GM8 510 aaKnown RBP13.82□□□□□ -0.2
LMX1B-201ENST00000355497 ALG12Q9BV10 488 aa13.82□□□□□ -0.2
LMX1B-201ENST00000355497 ARV1Q9H2C2 271 aa13.82□□□□□ -0.2
LMX1B-201ENST00000355497 WDR76Q9H967 626 aa13.82□□□□□ -0.2
LMX1B-201ENST00000355497 BLVRBP30043 206 aaPredicted RBP13.82□□□□□ -0.2
LMX1B-201ENST00000355497 RPL13AP40429 203 aaKnown RBP13.82□□□□□ -0.2
LMX1B-201ENST00000355497 ERV3-1Q14264 604 aa13.82□□□□□ -0.2
LMX1B-201ENST00000355497 SMN1Q16637 294 aaKnown RBP13.82□□□□□ -0.2
LMX1B-201ENST00000355497 TMEM176BQ3YBM2 270 aaPredicted RBP13.82□□□□□ -0.2
LMX1B-201ENST00000355497 Q499Y3 187 aa13.82□□□□□ -0.2
LMX1B-201ENST00000355497 SOHLH1Q5JUK2 328 aa13.82□□□□□ -0.2
LMX1B-201ENST00000355497 VHLLQ6RSH7 139 aa13.82□□□□□ -0.2
LMX1B-201ENST00000355497 IL34Q6ZMJ4 242 aa13.82□□□□□ -0.2
LMX1B-201ENST00000355497 LRRTM3Q86VH5 581 aa13.82□□□□□ -0.2
LMX1B-201ENST00000355497 ZNF480Q8WV37 535 aa13.82□□□□□ -0.2
LMX1B-201ENST00000355497 NIPSNAP3BQ9BS92 247 aa13.82□□□□□ -0.2
LMX1B-201ENST00000355497 WWTR1Q9GZV5 400 aa13.82□□□□□ -0.2
LMX1B-201ENST00000355497 PISDQ9UG56 409 aa13.82□□□□□ -0.2
LMX1B-201ENST00000355497 LRP5LA4QPB2 252 aa13.82□□□□□ -0.2
LMX1B-201ENST00000355497 H7C1C5 153 aa13.82□□□□□ -0.2
LMX1B-201ENST00000355497 BMP1P13497 986 aa13.82□□□□□ -0.2
LMX1B-201ENST00000355497 PVRP15151 417 aa13.82□□□□□ -0.2
LMX1B-201ENST00000355497 PTAFRP25105 342 aa13.82□□□□□ -0.2
LMX1B-201ENST00000355497 AOAHP28039 575 aa13.82□□□□□ -0.2
LMX1B-201ENST00000355497 TRHRP34981 398 aaPredicted RBP13.82□□□□□ -0.2
LMX1B-201ENST00000355497 GIPRP48546 466 aa13.82□□□□□ -0.2
LMX1B-201ENST00000355497 PSMB3P49720 205 aa13.82□□□□□ -0.2
LMX1B-201ENST00000355497 LCN6P62502 163 aa13.82□□□□□ -0.2
LMX1B-201ENST00000355497 CLINT1Q14677 625 aa13.82□□□□□ -0.2
LMX1B-201ENST00000355497 LEXMQ3ZCV2 418 aa13.82□□□□□ -0.2
LMX1B-201ENST00000355497 SLC36A2Q495M3 483 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms