RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 LIX1LQ8IVB5 337 aa20.28■□□□□ 0.84
NKX2-1-201ENST00000354822 GHDCQ8N2G8 530 aa20.28■□□□□ 0.84
NKX2-1-201ENST00000354822 ZNF721Q8TF20 911 aa20.28■□□□□ 0.84
NKX2-1-201ENST00000354822 RNF170Q96K19 258 aa20.28■□□□□ 0.84
NKX2-1-201ENST00000354822 OR14A2Q96R54 314 aa20.28■□□□□ 0.84
NKX2-1-201ENST00000354822 ADAM19Q9H013 955 aa20.28■□□□□ 0.84
NKX2-1-201ENST00000354822 BRD7Q9NPI1 651 aa20.28■□□□□ 0.84
NKX2-1-201ENST00000354822 ING3Q9NXR8 418 aa20.28■□□□□ 0.84
NKX2-1-201ENST00000354822 CACNG2Q9Y698 323 aa20.28■□□□□ 0.84
NKX2-1-201ENST00000354822 A0A1B0GTQ1 180 aa20.28■□□□□ 0.84
NKX2-1-201ENST00000354822 A0A1W2PPK0 400 aa20.28■□□□□ 0.84
NKX2-1-201ENST00000354822 A8MUA0 341 aa20.28■□□□□ 0.84
NKX2-1-201ENST00000354822 EEF1E1O43324 174 aaKnown RBP20.28■□□□□ 0.84
NKX2-1-201ENST00000354822 LANCL1O43813 399 aa20.28■□□□□ 0.84
NKX2-1-201ENST00000354822 PRKNO60260 465 aaPredicted RBP20.28■□□□□ 0.84
NKX2-1-201ENST00000354822 HIST1H2ABP04908 130 aa20.28■□□□□ 0.84
NKX2-1-201ENST00000354822 ARSBP15848 533 aa20.28■□□□□ 0.84
NKX2-1-201ENST00000354822 SRMP19623 302 aa20.28■□□□□ 0.84
NKX2-1-201ENST00000354822 UQCRC1P31930 480 aa20.28■□□□□ 0.84
NKX2-1-201ENST00000354822 NXPH1P58417 271 aa20.28■□□□□ 0.84
NKX2-1-201ENST00000354822 EGR4Q05215 589 aa20.28■□□□□ 0.84
NKX2-1-201ENST00000354822 HIST3H2AQ7L7L0 130 aa20.28■□□□□ 0.84
NKX2-1-201ENST00000354822 HIST1H2ACQ93077 130 aa20.28■□□□□ 0.84
NKX2-1-201ENST00000354822 MOGAT1Q96PD6 335 aa20.28■□□□□ 0.84
NKX2-1-201ENST00000354822 ADOQ96SZ5 270 aa20.28■□□□□ 0.84
NKX2-1-201ENST00000354822 PDCD1LG2Q9BQ51 273 aa20.28■□□□□ 0.84
NKX2-1-201ENST00000354822 GRHPRQ9UBQ7 328 aa20.28■□□□□ 0.84
NKX2-1-201ENST00000354822 DDAH2O95865 285 aa20.27■□□□□ 0.84
NKX2-1-201ENST00000354822 KCNAB1Q14722 419 aa20.27■□□□□ 0.84
NKX2-1-201ENST00000354822 PLA1AQ53H76 456 aa20.27■□□□□ 0.84
NKX2-1-201ENST00000354822 CCDC92Q53HC0 331 aaPredicted RBP20.27■□□□□ 0.84
NKX2-1-201ENST00000354822 ZNF684Q5T5D7 378 aa20.27■□□□□ 0.84
NKX2-1-201ENST00000354822 EXD3Q8N9H8 876 aa20.27■□□□□ 0.84
NKX2-1-201ENST00000354822 OR5H6Q8NGV6 325 aa20.27■□□□□ 0.84
NKX2-1-201ENST00000354822 TRAF4Q9BUZ4 470 aaPredicted RBP20.27■□□□□ 0.84
NKX2-1-201ENST00000354822 CAMK2AQ9UQM7 478 aa20.27■□□□□ 0.84
NKX2-1-201ENST00000354822 GON4LQ3T8J9 2241 aa20.27■□□□□ 0.84
NKX2-1-201ENST00000354822 TFPIP10646 304 aa20.27■□□□□ 0.83
NKX2-1-201ENST00000354822 ERP29P30040 261 aaKnown RBP20.27■□□□□ 0.83
NKX2-1-201ENST00000354822 RCVRNP35243 200 aa20.27■□□□□ 0.83
NKX2-1-201ENST00000354822 PSMB10P40306 273 aa20.27■□□□□ 0.83
NKX2-1-201ENST00000354822 RRAS2P62070 204 aaPredicted RBP20.27■□□□□ 0.83
NKX2-1-201ENST00000354822 GPR139Q6DWJ6 353 aa20.27■□□□□ 0.83
NKX2-1-201ENST00000354822 PLXDC1Q8IUK5 500 aa20.27■□□□□ 0.83
NKX2-1-201ENST00000354822 ASCC1Q8N9N2 400 aaKnown RBP20.27■□□□□ 0.83
NKX2-1-201ENST00000354822 ADAMTS14Q8WXS8 1223 aa20.27■□□□□ 0.83
NKX2-1-201ENST00000354822 DAZLQ92904 295 aaKnown RBP20.27■□□□□ 0.83
NKX2-1-201ENST00000354822 MNTQ99583 582 aa20.27■□□□□ 0.83
NKX2-1-201ENST00000354822 FOXQ1Q9C009 403 aa20.27■□□□□ 0.83
NKX2-1-201ENST00000354822 RNF215Q9Y6U7 377 aa20.27■□□□□ 0.83
NKX2-1-201ENST00000354822 TACR3P29371 465 aa20.26■□□□□ 0.83
NKX2-1-201ENST00000354822 RPL6Q02878 288 aaKnown RBP20.26■□□□□ 0.83
NKX2-1-201ENST00000354822 HLA-DQA1Q5Y7H0 255 aa20.26■□□□□ 0.83
NKX2-1-201ENST00000354822 FAM220AQ7Z4H9 259 aa20.26■□□□□ 0.83
NKX2-1-201ENST00000354822 LSM14AQ8ND56 463 aaKnown RBP20.26■□□□□ 0.83
NKX2-1-201ENST00000354822 TSLPQ969D9 159 aa20.26■□□□□ 0.83
NKX2-1-201ENST00000354822 LPAR4Q99677 370 aa20.26■□□□□ 0.83
NKX2-1-201ENST00000354822 FKRPQ9H9S5 495 aa20.26■□□□□ 0.83
NKX2-1-201ENST00000354822 AK6Q9Y3D8 172 aaKnown RBP20.26■□□□□ 0.83
NKX2-1-201ENST00000354822 A0A1B0GVC2 190 aa20.25■□□□□ 0.83
NKX2-1-201ENST00000354822 A0A1W2PQD3 144 aa20.25■□□□□ 0.83
NKX2-1-201ENST00000354822 TCRBV16S1A1N1A0A5B0 115 aa20.25■□□□□ 0.83
NKX2-1-201ENST00000354822 A6NIN4 97 aa20.25■□□□□ 0.83
NKX2-1-201ENST00000354822 SERPINI2O75830 405 aa20.25■□□□□ 0.83
NKX2-1-201ENST00000354822 SNRPBP14678 240 aaKnown RBP20.25■□□□□ 0.83
NKX2-1-201ENST00000354822 MST1P26927 711 aa20.25■□□□□ 0.83
NKX2-1-201ENST00000354822 IL12BP29460 328 aa20.25■□□□□ 0.83
NKX2-1-201ENST00000354822 STARD6P59095 220 aa20.25■□□□□ 0.83
NKX2-1-201ENST00000354822 LTBQ06643 244 aa20.25■□□□□ 0.83
NKX2-1-201ENST00000354822 NANOGNBQ7Z5D8 188 aa20.25■□□□□ 0.83
NKX2-1-201ENST00000354822 SLC7A5P1Q8MH63 180 aa20.25■□□□□ 0.83
NKX2-1-201ENST00000354822 YIPF7Q8N8F6 280 aa20.25■□□□□ 0.83
NKX2-1-201ENST00000354822 DTX3Q8N9I9 347 aa20.25■□□□□ 0.83
NKX2-1-201ENST00000354822 OR2T4Q8NH00 348 aa20.25■□□□□ 0.83
NKX2-1-201ENST00000354822 ZNF671Q8TAW3 534 aa20.25■□□□□ 0.83
NKX2-1-201ENST00000354822 ADAD1Q96M93 576 aaKnown RBP20.25■□□□□ 0.83
NKX2-1-201ENST00000354822 NOX4Q9NPH5 578 aa20.25■□□□□ 0.83
NKX2-1-201ENST00000354822 PAQR5Q9NXK6 330 aaPredicted RBP20.25■□□□□ 0.83
NKX2-1-201ENST00000354822 OR6C70A6NIJ9 312 aa20.25■□□□□ 0.83
NKX2-1-201ENST00000354822 FAM47E-STBD1D6RA91 191 aa20.25■□□□□ 0.83
NKX2-1-201ENST00000354822 TO15178 435 aa20.25■□□□□ 0.83
NKX2-1-201ENST00000354822 CTDSPLO15194 276 aa20.25■□□□□ 0.83
NKX2-1-201ENST00000354822 EIF4E2O60573 245 aaKnown RBP20.25■□□□□ 0.83
NKX2-1-201ENST00000354822 DHFRP00374 187 aa20.25■□□□□ 0.83
NKX2-1-201ENST00000354822 AGFG1P52594 562 aaKnown RBP20.25■□□□□ 0.83
NKX2-1-201ENST00000354822 NTRK2Q16620 822 aa20.25■□□□□ 0.83
NKX2-1-201ENST00000354822 SLC36A2Q495M3 483 aa20.25■□□□□ 0.83
NKX2-1-201ENST00000354822 KRT74Q7RTS7 529 aa20.25■□□□□ 0.83
NKX2-1-201ENST00000354822 TOMM5Q8N4H5 51 aa20.25■□□□□ 0.83
NKX2-1-201ENST00000354822 AKAP1Q92667 903 aaKnown RBP eCLIP20.25■□□□□ 0.83
NKX2-1-201ENST00000354822 GAL3ST4Q96RP7 486 aa20.25■□□□□ 0.83
NKX2-1-201ENST00000354822 C7orf50Q9BRJ6 194 aaKnown RBP20.25■□□□□ 0.83
NKX2-1-201ENST00000354822 MRI1Q9BV20 369 aa20.25■□□□□ 0.83
NKX2-1-201ENST00000354822 NIPAL2Q9H841 368 aa20.25■□□□□ 0.83
NKX2-1-201ENST00000354822 TMEM165Q9HC07 324 aa20.25■□□□□ 0.83
NKX2-1-201ENST00000354822 ZNF304Q9HCX3 659 aa20.25■□□□□ 0.83
NKX2-1-201ENST00000354822 IGHV1OR21-1A0A087WYE8 117 aa20.24■□□□□ 0.83
NKX2-1-201ENST00000354822 NUDT21O43809 227 aaKnown RBP20.24■□□□□ 0.83
NKX2-1-201ENST00000354822 SDC3O75056 442 aa20.24■□□□□ 0.83
NKX2-1-201ENST00000354822 ICOSLGO75144 302 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms