RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 IRF8Q02556 426 aa9.97□□□□□ -0.81
SND1-201ENST00000354725 ACSM2AQ08AH3 577 aa9.97□□□□□ -0.81
SND1-201ENST00000354725 MPPED2Q15777 294 aa9.97□□□□□ -0.81
SND1-201ENST00000354725 PRAMEF14Q5SWL7 426 aa9.97□□□□□ -0.81
SND1-201ENST00000354725 ACSM2BQ68CK6 577 aa9.97□□□□□ -0.81
SND1-201ENST00000354725 C22orf39Q6P5X5 142 aa9.97□□□□□ -0.81
SND1-201ENST00000354725 ETFBKMTQ8IXQ9 262 aa9.97□□□□□ -0.81
SND1-201ENST00000354725 CCDC54Q8NEL0 328 aa9.97□□□□□ -0.81
SND1-201ENST00000354725 OR2M2Q96R28 347 aa9.97□□□□□ -0.81
SND1-201ENST00000354725 MTERF1Q99551 399 aaKnown RBP9.97□□□□□ -0.81
SND1-201ENST00000354725 SOSTQ9BQB4 213 aa9.97□□□□□ -0.81
SND1-201ENST00000354725 SGPP1Q9BX95 441 aa9.97□□□□□ -0.81
SND1-201ENST00000354725 LGR4Q9BXB1 951 aa9.97□□□□□ -0.81
SND1-201ENST00000354725 CACNG6Q9BXT2 260 aa9.97□□□□□ -0.81
SND1-201ENST00000354725 HIPK2Q9H2X6 1198 aa9.97□□□□□ -0.81
SND1-201ENST00000354725 TMEM140Q9NV12 185 aa9.97□□□□□ -0.81
SND1-201ENST00000354725 NLGN3Q9NZ94 848 aa9.97□□□□□ -0.81
SND1-201ENST00000354725 ZNF670-ZNF695F2Z2N8 137 aa9.97□□□□□ -0.81
SND1-201ENST00000354725 HCRTR2O43614 444 aa9.97□□□□□ -0.81
SND1-201ENST00000354725 FBXO24O75426 580 aa9.97□□□□□ -0.81
SND1-201ENST00000354725 GASTP01350 101 aa9.97□□□□□ -0.81
SND1-201ENST00000354725 ANXA4P09525 319 aaPredicted RBP9.97□□□□□ -0.81
SND1-201ENST00000354725 SRFP11831 508 aa9.97□□□□□ -0.81
SND1-201ENST00000354725 HIST1H1BP16401 226 aaKnown RBP9.97□□□□□ -0.81
SND1-201ENST00000354725 ANXA11P50995 505 aaKnown RBP9.97□□□□□ -0.81
SND1-201ENST00000354725 LIM2P55344 173 aa9.97□□□□□ -0.81
SND1-201ENST00000354725 ZNF763Q0D2J5 394 aa9.97□□□□□ -0.81
SND1-201ENST00000354725 XKR6Q5GH73 641 aa9.97□□□□□ -0.81
SND1-201ENST00000354725 GCNT6Q5T4J0 391 aa9.97□□□□□ -0.81
SND1-201ENST00000354725 FAM180AQ6UWF9 173 aa9.97□□□□□ -0.81
SND1-201ENST00000354725 CD300LDQ6UXZ3 194 aa9.97□□□□□ -0.81
SND1-201ENST00000354725 BEST4Q8NFU0 473 aa9.97□□□□□ -0.81
SND1-201ENST00000354725 OR4Q3Q8NH05 313 aa9.97□□□□□ -0.81
SND1-201ENST00000354725 PHYHIPQ92561 330 aa9.97□□□□□ -0.81
SND1-201ENST00000354725 ELMOD3Q96FG2 381 aa9.97□□□□□ -0.81
SND1-201ENST00000354725 SUCNR1Q9BXA5 334 aa9.97□□□□□ -0.81
SND1-201ENST00000354725 ATG10Q9H0Y0 220 aa9.97□□□□□ -0.81
SND1-201ENST00000354725 LINC00597Q9H2U6 94 aa9.97□□□□□ -0.81
SND1-201ENST00000354725 FN3KQ9H479 309 aa9.97□□□□□ -0.81
SND1-201ENST00000354725 MRPS18AQ9NVS2 196 aaKnown RBP9.97□□□□□ -0.81
SND1-201ENST00000354725 LHX6Q9UPM6 363 aa9.97□□□□□ -0.81
SND1-201ENST00000354725 VPS13AQ96RL7 3174 aa9.97□□□□□ -0.81
SND1-201ENST00000354725 EML5Q05BV3 1969 aa9.97□□□□□ -0.81
SND1-201ENST00000354725 HYKKA2RU49 373 aa9.97□□□□□ -0.81
SND1-201ENST00000354725 VSTM2BA6NLU5 285 aa9.97□□□□□ -0.81
SND1-201ENST00000354725 CPSF4O95639 269 aaKnown RBP9.97□□□□□ -0.81
SND1-201ENST00000354725 PRLHRP49683 370 aa9.97□□□□□ -0.81
SND1-201ENST00000354725 CRISP1P54107 249 aa9.97□□□□□ -0.81
SND1-201ENST00000354725 CDH12P55289 794 aa9.97□□□□□ -0.81
SND1-201ENST00000354725 ZXDAP98168 799 aa9.97□□□□□ -0.81
SND1-201ENST00000354725 NFATC4Q14934 902 aa9.97□□□□□ -0.81
SND1-201ENST00000354725 P2RY14Q15391 338 aa9.97□□□□□ -0.81
SND1-201ENST00000354725 CCSMST1Q4G0I0 132 aa9.97□□□□□ -0.81
SND1-201ENST00000354725 AGTRAPQ6RW13 159 aa9.97□□□□□ -0.81
SND1-201ENST00000354725 WDR53Q7Z5U6 358 aaPredicted RBP9.97□□□□□ -0.81
SND1-201ENST00000354725 GJD3Q8N144 294 aa9.97□□□□□ -0.81
SND1-201ENST00000354725 OR5T1Q8NG75 326 aa9.97□□□□□ -0.81
SND1-201ENST00000354725 OR2L3Q8NG85 312 aa9.97□□□□□ -0.81
SND1-201ENST00000354725 OR5M9Q8NGP3 310 aa9.97□□□□□ -0.81
SND1-201ENST00000354725 PIGQQ9BRB3 760 aa9.97□□□□□ -0.81
SND1-201ENST00000354725 A4GALTQ9NPC4 353 aa9.97□□□□□ -0.81
SND1-201ENST00000354725 EXOSC4Q9NPD3 245 aaKnown RBP9.97□□□□□ -0.81
SND1-201ENST00000354725 TESQ9UGI8 421 aaKnown RBP9.97□□□□□ -0.81
SND1-201ENST00000354725 A0A1B0GW55 424 aa9.96□□□□□ -0.81
SND1-201ENST00000354725 COLCA2A8K830 154 aa9.96□□□□□ -0.81
SND1-201ENST00000354725 PRKYO43930 277 aa9.96□□□□□ -0.81
SND1-201ENST00000354725 CSO75390 466 aaKnown RBP9.96□□□□□ -0.81
SND1-201ENST00000354725 TBX6O95947 436 aaPredicted RBP9.96□□□□□ -0.81
SND1-201ENST00000354725 CISD3P0C7P0 127 aa9.96□□□□□ -0.81
SND1-201ENST00000354725 DUX4L2P0CJ85 424 aa9.96□□□□□ -0.81
SND1-201ENST00000354725 DUX4L3P0CJ86 424 aa9.96□□□□□ -0.81
SND1-201ENST00000354725 DUX4L4P0CJ87 422 aa9.96□□□□□ -0.81
SND1-201ENST00000354725 DUX4L5P0CJ88 424 aa9.96□□□□□ -0.81
SND1-201ENST00000354725 DUX4L6P0CJ89 424 aa9.96□□□□□ -0.81
SND1-201ENST00000354725 DUX4L7P0CJ90 424 aa9.96□□□□□ -0.81
SND1-201ENST00000354725 SULT1A3P0DMM9 295 aa9.96□□□□□ -0.81
SND1-201ENST00000354725 SULT1A4P0DMN0 295 aa9.96□□□□□ -0.81
SND1-201ENST00000354725 NQO2P16083 231 aa9.96□□□□□ -0.81
SND1-201ENST00000354725 SLC6A1P30531 599 aa9.96□□□□□ -0.81
SND1-201ENST00000354725 INPP1P49441 399 aa9.96□□□□□ -0.81
SND1-201ENST00000354725 SNRPD1P62314 119 aaKnown RBP9.96□□□□□ -0.81
SND1-201ENST00000354725 MRPS11P82912 194 aaKnown RBP9.96□□□□□ -0.81
SND1-201ENST00000354725 TOMM34Q15785 309 aaPredicted RBP9.96□□□□□ -0.81
SND1-201ENST00000354725 ZNF239Q16600 458 aaKnown RBP9.96□□□□□ -0.81
SND1-201ENST00000354725 TMPRSS11FQ6ZWK6 438 aa9.96□□□□□ -0.81
SND1-201ENST00000354725 SSX6Q7RTT6 188 aa9.96□□□□□ -0.81
SND1-201ENST00000354725 ARMC10Q8N2F6 343 aa9.96□□□□□ -0.81
SND1-201ENST00000354725 PXT1Q8NFP0 134 aa9.96□□□□□ -0.81
SND1-201ENST00000354725 PPP1R3EQ9H7J1 279 aa9.96□□□□□ -0.81
SND1-201ENST00000354725 AMBNQ9NP70 447 aa9.96□□□□□ -0.81
SND1-201ENST00000354725 B3GAT2Q9NPZ5 323 aa9.96□□□□□ -0.81
SND1-201ENST00000354725 DUX4Q9UBX2 424 aa9.96□□□□□ -0.81
SND1-201ENST00000354725 B4GALT6Q9UBX8 382 aa9.96□□□□□ -0.81
SND1-201ENST00000354725 SH2B3Q9UQQ2 575 aa9.96□□□□□ -0.81
SND1-201ENST00000354725 CKAP5Q14008 2032 aa9.96□□□□□ -0.82
SND1-201ENST00000354725 DLEU1O43261 78 aa9.96□□□□□ -0.82
SND1-201ENST00000354725 FADS1O60427 444 aa9.96□□□□□ -0.82
SND1-201ENST00000354725 ADAP00813 363 aa9.96□□□□□ -0.82
SND1-201ENST00000354725 SPIBQ01892 262 aa9.96□□□□□ -0.82
SND1-201ENST00000354725 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms