RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 PRO1933Q9H354 126 aa9.27□□□□□ -0.93
SYNE1-203ENST00000354674 GLIPR2Q9H4G4 154 aa9.27□□□□□ -0.93
SYNE1-203ENST00000354674 TPT1P8Q9HAU6 139 aa9.27□□□□□ -0.93
SYNE1-203ENST00000354674 NEUROD4Q9HD90 331 aa9.27□□□□□ -0.93
SYNE1-203ENST00000354674 CA10Q9NS85 328 aa9.27□□□□□ -0.93
SYNE1-203ENST00000354674 GPATCH2Q9NW75 528 aa9.27□□□□□ -0.93
SYNE1-203ENST00000354674 SEC14L3Q9UDX4 400 aa9.27□□□□□ -0.93
SYNE1-203ENST00000354674 A0A0A6YYC8 382 aaPredicted RBP9.27□□□□□ -0.93
SYNE1-203ENST00000354674 TMEM150CB9EJG8 249 aa9.27□□□□□ -0.93
SYNE1-203ENST00000354674 I3L1I5 382 aaPredicted RBP9.27□□□□□ -0.93
SYNE1-203ENST00000354674 SGK494L7N484 410 aa9.27□□□□□ -0.93
SYNE1-203ENST00000354674 GATCO43716 136 aaKnown RBP9.27□□□□□ -0.93
SYNE1-203ENST00000354674 RAD1O60671 282 aa9.27□□□□□ -0.93
SYNE1-203ENST00000354674 LRP3O75074 770 aa9.27□□□□□ -0.93
SYNE1-203ENST00000354674 TCRBP04435 133 aa9.27□□□□□ -0.93
SYNE1-203ENST00000354674 FGF2P09038 288 aa9.27□□□□□ -0.93
SYNE1-203ENST00000354674 PAICSP22234 425 aaKnown RBP9.27□□□□□ -0.93
SYNE1-203ENST00000354674 ACHEP22303 614 aa9.27□□□□□ -0.93
SYNE1-203ENST00000354674 UQCRC2P22695 453 aa9.27□□□□□ -0.93
SYNE1-203ENST00000354674 CD79BP40259 229 aa9.27□□□□□ -0.93
SYNE1-203ENST00000354674 SKP1P63208 163 aa9.27□□□□□ -0.93
SYNE1-203ENST00000354674 ZFP36L1Q07352 338 aaKnown RBP9.27□□□□□ -0.93
SYNE1-203ENST00000354674 ABHD18Q0P651 414 aa9.27□□□□□ -0.93
SYNE1-203ENST00000354674 CHAF1BQ13112 559 aa9.27□□□□□ -0.93
SYNE1-203ENST00000354674 GPR135Q8IZ08 494 aa9.27□□□□□ -0.93
SYNE1-203ENST00000354674 SHISA5Q8N114 240 aa9.27□□□□□ -0.93
SYNE1-203ENST00000354674 OR5T3Q8NGG3 340 aa9.27□□□□□ -0.93
SYNE1-203ENST00000354674 OR10K1Q8NGX5 313 aa9.27□□□□□ -0.93
SYNE1-203ENST00000354674 STK35Q8TDR2 534 aa9.27□□□□□ -0.93
SYNE1-203ENST00000354674 MVB12AQ96EY5 273 aa9.27□□□□□ -0.93
SYNE1-203ENST00000354674 KCTD7Q96MP8 289 aa9.27□□□□□ -0.93
SYNE1-203ENST00000354674 SSX3Q99909 188 aa9.27□□□□□ -0.93
SYNE1-203ENST00000354674 LRFN3Q9BTN0 628 aa9.27□□□□□ -0.93
SYNE1-203ENST00000354674 CXorf36Q9H7Y0 433 aa9.27□□□□□ -0.93
SYNE1-203ENST00000354674 EMC7Q9NPA0 242 aa9.27□□□□□ -0.93
SYNE1-203ENST00000354674 SIDT1Q9NXL6 827 aaKnown RBP9.27□□□□□ -0.93
SYNE1-203ENST00000354674 MGAT4CQ9UBM8 478 aa9.27□□□□□ -0.93
SYNE1-203ENST00000354674 CORO2BQ9UQ03 480 aa9.27□□□□□ -0.93
SYNE1-203ENST00000354674 RP1P56715 2156 aa9.27□□□□□ -0.93
SYNE1-203ENST00000354674 GLOD5A6NK44 160 aa9.26□□□□□ -0.93
SYNE1-203ENST00000354674 ABCD4O14678 606 aa9.26□□□□□ -0.93
SYNE1-203ENST00000354674 SOX15O60248 233 aa9.26□□□□□ -0.93
SYNE1-203ENST00000354674 IGHV2-70P01814 119 aa9.26□□□□□ -0.93
SYNE1-203ENST00000354674 NQO2P16083 231 aa9.26□□□□□ -0.93
SYNE1-203ENST00000354674 TLX1P31314 330 aaPredicted RBP9.26□□□□□ -0.93
SYNE1-203ENST00000354674 ARL4DP49703 201 aa9.26□□□□□ -0.93
SYNE1-203ENST00000354674 MANFP55145 182 aaKnown RBP9.26□□□□□ -0.93
SYNE1-203ENST00000354674 DUSP2Q05923 314 aa9.26□□□□□ -0.93
SYNE1-203ENST00000354674 NCMAPQ5T1S8 102 aa9.26□□□□□ -0.93
SYNE1-203ENST00000354674 ETV3LQ6ZN32 361 aa9.26□□□□□ -0.93
SYNE1-203ENST00000354674 LGI4Q8N135 537 aa9.26□□□□□ -0.93
SYNE1-203ENST00000354674 WDSUB1Q8N9V3 476 aa9.26□□□□□ -0.93
SYNE1-203ENST00000354674 ACOT12Q8WYK0 555 aa9.26□□□□□ -0.93
SYNE1-203ENST00000354674 CCDC74BQ96LY2 380 aa9.26□□□□□ -0.93
SYNE1-203ENST00000354674 DNAJB11Q9UBS4 358 aa9.26□□□□□ -0.93
SYNE1-203ENST00000354674 KIF25Q9UIL4 384 aa9.26□□□□□ -0.93
SYNE1-203ENST00000354674 SHISA3A0PJX4 238 aa9.26□□□□□ -0.93
SYNE1-203ENST00000354674 BLACEA4D250 179 aa9.26□□□□□ -0.93
SYNE1-203ENST00000354674 ZNF860A6NHJ4 632 aa9.26□□□□□ -0.93
SYNE1-203ENST00000354674 CHST10O43529 356 aa9.26□□□□□ -0.93
SYNE1-203ENST00000354674 RDH16O75452 317 aa9.26□□□□□ -0.93
SYNE1-203ENST00000354674 SCG5P05408 212 aa9.26□□□□□ -0.93
SYNE1-203ENST00000354674 ADH6P28332 368 aa9.26□□□□□ -0.93
SYNE1-203ENST00000354674 ITGA1P56199 1179 aa9.26□□□□□ -0.93
SYNE1-203ENST00000354674 PDZK1IP1Q13113 114 aa9.26□□□□□ -0.93
SYNE1-203ENST00000354674 TRA2AQ13595 282 aaKnown RBP eCLIP9.26□□□□□ -0.93
SYNE1-203ENST00000354674 LHFPL3Q86UP9 236 aa9.26□□□□□ -0.93
SYNE1-203ENST00000354674 TMEM52Q8NDY8 209 aa9.26□□□□□ -0.93
SYNE1-203ENST00000354674 OR52E4Q8NGH9 312 aa9.26□□□□□ -0.93
SYNE1-203ENST00000354674 ADAMTS18Q8TE60 1221 aa9.26□□□□□ -0.93
SYNE1-203ENST00000354674 GLYATL2Q8WU03 294 aa9.26□□□□□ -0.93
SYNE1-203ENST00000354674 SLC35A5Q9BS91 424 aa9.26□□□□□ -0.93
SYNE1-203ENST00000354674 ATG101Q9BSB4 218 aa9.26□□□□□ -0.93
SYNE1-203ENST00000354674 RXFP3Q9NSD7 469 aa9.26□□□□□ -0.93
SYNE1-203ENST00000354674 CUTCQ9NTM9 273 aa9.26□□□□□ -0.93
SYNE1-203ENST00000354674 UFSP2Q9NUQ7 469 aa9.26□□□□□ -0.93
SYNE1-203ENST00000354674 NDRG3Q9UGV2 375 aa9.26□□□□□ -0.93
SYNE1-203ENST00000354674 ASXL3Q9C0F0 2248 aa9.26□□□□□ -0.93
SYNE1-203ENST00000354674 IQCMA0A1B0GVH7 501 aa9.26□□□□□ -0.93
SYNE1-203ENST00000354674 TPST2O60704 377 aa9.26□□□□□ -0.93
SYNE1-203ENST00000354674 TXNDC12O95881 172 aa9.26□□□□□ -0.93
SYNE1-203ENST00000354674 IFI6P09912 130 aa9.26□□□□□ -0.93
SYNE1-203ENST00000354674 S100PP25815 95 aa9.26□□□□□ -0.93
SYNE1-203ENST00000354674 SLC6A1P30531 599 aa9.26□□□□□ -0.93
SYNE1-203ENST00000354674 NTSP30990 170 aa9.26□□□□□ -0.93
SYNE1-203ENST00000354674 PRKAR1BP31321 381 aa9.26□□□□□ -0.93
SYNE1-203ENST00000354674 RGNQ15493 299 aa9.26□□□□□ -0.93
SYNE1-203ENST00000354674 CSRP2Q16527 193 aa9.26□□□□□ -0.93
SYNE1-203ENST00000354674 ZNF628Q5EBL2 1059 aa9.26□□□□□ -0.93
SYNE1-203ENST00000354674 TMEM64Q6YI46 380 aa9.26□□□□□ -0.93
SYNE1-203ENST00000354674 SAMD12Q8N8I0 201 aa9.26□□□□□ -0.93
SYNE1-203ENST00000354674 OR52N2Q8NGI0 321 aa9.26□□□□□ -0.93
SYNE1-203ENST00000354674 RHBDD1Q8TEB9 315 aa9.26□□□□□ -0.93
SYNE1-203ENST00000354674 S100PBPQ96BU1 408 aa9.26□□□□□ -0.93
SYNE1-203ENST00000354674 NEURL3Q96EH8 262 aa9.26□□□□□ -0.93
SYNE1-203ENST00000354674 WDFY2Q96P53 400 aa9.26□□□□□ -0.93
SYNE1-203ENST00000354674 MS4A4EQ96PG1 132 aa9.26□□□□□ -0.93
SYNE1-203ENST00000354674 OR51M1Q9H341 326 aa9.26□□□□□ -0.93
SYNE1-203ENST00000354674 FGF21Q9NSA1 209 aa9.26□□□□□ -0.93
SYNE1-203ENST00000354674 ZNF69Q9UC07 566 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms