RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 TRAPPC1Q9Y5R8 145 aa7.52□□□□□ -1.21
SCN8A-201ENST00000354534 AGLP35573 1532 aa7.52□□□□□ -1.21
SCN8A-201ENST00000354534 IRAK2O43187 625 aa7.52□□□□□ -1.21
SCN8A-201ENST00000354534 OSMP13725 252 aa7.52□□□□□ -1.21
SCN8A-201ENST00000354534 VEGFAP15692 232 aaPredicted RBP7.52□□□□□ -1.21
SCN8A-201ENST00000354534 GABRA5P31644 462 aa7.52□□□□□ -1.21
SCN8A-201ENST00000354534 RPL29P47914 159 aaKnown RBP7.52□□□□□ -1.21
SCN8A-201ENST00000354534 SELPLGQ14242 412 aa7.52□□□□□ -1.21
SCN8A-201ENST00000354534 PROX2Q3B8N5 592 aa7.52□□□□□ -1.21
SCN8A-201ENST00000354534 NDUFAF7Q7L592 441 aa7.52□□□□□ -1.21
SCN8A-201ENST00000354534 MEX3DQ86XN8 651 aaKnown RBP7.52□□□□□ -1.21
SCN8A-201ENST00000354534 TP53RKQ96S44 253 aa7.52□□□□□ -1.21
SCN8A-201ENST00000354534 ENPP5Q9UJA9 477 aa7.52□□□□□ -1.21
SCN8A-201ENST00000354534 STYXL1Q9Y6J8 313 aa7.52□□□□□ -1.21
SCN8A-201ENST00000354534 CST2P09228 141 aa7.51□□□□□ -1.21
SCN8A-201ENST00000354534 ZNF28P17035 718 aa7.51□□□□□ -1.21
SCN8A-201ENST00000354534 PTGIRP43119 386 aa7.51□□□□□ -1.21
SCN8A-201ENST00000354534 CDK5R2Q13319 367 aa7.51□□□□□ -1.21
SCN8A-201ENST00000354534 KCNC3Q14003 757 aa7.51□□□□□ -1.21
SCN8A-201ENST00000354534 OR7A5Q15622 319 aa7.51□□□□□ -1.21
SCN8A-201ENST00000354534 Q6ZN92 141 aa7.51□□□□□ -1.21
SCN8A-201ENST00000354534 LARP4Q71RC2 724 aaKnown RBP eCLIP7.51□□□□□ -1.21
SCN8A-201ENST00000354534 TMEM123Q8N131 208 aa7.51□□□□□ -1.21
SCN8A-201ENST00000354534 MUL1Q969V5 352 aa7.51□□□□□ -1.21
SCN8A-201ENST00000354534 INTS6Q9UL03 887 aaKnown RBP7.51□□□□□ -1.21
SCN8A-201ENST00000354534 TRAPPC4Q9Y296 219 aa7.51□□□□□ -1.21
SCN8A-201ENST00000354534 C4orf47A7E2U8 309 aa7.51□□□□□ -1.21
SCN8A-201ENST00000354534 RAB29O14966 203 aa7.51□□□□□ -1.21
SCN8A-201ENST00000354534 DLX3O60479 287 aa7.51□□□□□ -1.21
SCN8A-201ENST00000354534 CNMDO75829 334 aa7.51□□□□□ -1.21
SCN8A-201ENST00000354534 PDE7AQ13946 482 aa7.51□□□□□ -1.21
SCN8A-201ENST00000354534 APOBEC3HQ6NTF7 200 aaKnown RBP7.51□□□□□ -1.21
SCN8A-201ENST00000354534 CHADLQ6NUI6 762 aa7.51□□□□□ -1.21
SCN8A-201ENST00000354534 FBXL18Q96ME1 805 aa7.51□□□□□ -1.21
SCN8A-201ENST00000354534 KREMEN1Q96MU8 473 aa7.51□□□□□ -1.21
SCN8A-201ENST00000354534 SYT17Q9BSW7 474 aa7.51□□□□□ -1.21
SCN8A-201ENST00000354534 DECR2Q9NUI1 292 aa7.51□□□□□ -1.21
SCN8A-201ENST00000354534 GIMAP2Q9UG22 337 aa7.51□□□□□ -1.21
SCN8A-201ENST00000354534 OR5V1Q9UGF6 321 aa7.51□□□□□ -1.21
SCN8A-201ENST00000354534 KCNG2Q9UJ96 466 aa7.51□□□□□ -1.21
SCN8A-201ENST00000354534 SCML1Q9UN30 329 aa7.51□□□□□ -1.21
SCN8A-201ENST00000354534 PCM1Q15154 2024 aa7.51□□□□□ -1.21
SCN8A-201ENST00000354534 CST3P01034 146 aaPredicted RBP7.51□□□□□ -1.21
SCN8A-201ENST00000354534 AHSGP02765 367 aa7.51□□□□□ -1.21
SCN8A-201ENST00000354534 GYPBP06028 91 aa7.51□□□□□ -1.21
SCN8A-201ENST00000354534 ABOP16442 354 aa7.51□□□□□ -1.21
SCN8A-201ENST00000354534 PBX1P40424 430 aa7.51□□□□□ -1.21
SCN8A-201ENST00000354534 TNFRSF17Q02223 184 aa7.51□□□□□ -1.21
SCN8A-201ENST00000354534 DHRS13Q6UX07 377 aa7.51□□□□□ -1.21
SCN8A-201ENST00000354534 CILP2Q8IUL8 1156 aa7.51□□□□□ -1.21
SCN8A-201ENST00000354534 ZNF595Q8IYB9 648 aa7.51□□□□□ -1.21
SCN8A-201ENST00000354534 FBXO22Q8NEZ5 403 aa7.51□□□□□ -1.21
SCN8A-201ENST00000354534 ST8SIA4Q92187 359 aa7.51□□□□□ -1.21
SCN8A-201ENST00000354534 PDE7BQ9NP56 450 aa7.51□□□□□ -1.21
SCN8A-201ENST00000354534 ACSS1Q9NUB1 689 aaPredicted RBP7.51□□□□□ -1.21
SCN8A-201ENST00000354534 ASIC5Q9NY37 505 aa7.51□□□□□ -1.21
SCN8A-201ENST00000354534 C2CD4BA6NLJ0 364 aa7.51□□□□□ -1.21
SCN8A-201ENST00000354534 RGS11O94810 467 aa7.51□□□□□ -1.21
SCN8A-201ENST00000354534 RAB40ALP0C0E4 278 aa7.51□□□□□ -1.21
SCN8A-201ENST00000354534 HIST1H3AP68431 136 aa7.51□□□□□ -1.21
SCN8A-201ENST00000354534 ZNF534Q76KX8 674 aa7.51□□□□□ -1.21
SCN8A-201ENST00000354534 CNTN4Q8IWV2 1026 aa7.51□□□□□ -1.21
SCN8A-201ENST00000354534 NRMQ8IXM6 262 aa7.51□□□□□ -1.21
SCN8A-201ENST00000354534 RAB40AQ8WXH6 277 aa7.51□□□□□ -1.21
SCN8A-201ENST00000354534 ADAMTS14Q8WXS8 1223 aa7.51□□□□□ -1.21
SCN8A-201ENST00000354534 CLDND1Q9NY35 253 aa7.51□□□□□ -1.21
SCN8A-201ENST00000354534 RNF150Q9ULK6 438 aa7.51□□□□□ -1.21
SCN8A-201ENST00000354534 ADH4P08319 380 aa7.51□□□□□ -1.21
SCN8A-201ENST00000354534 ETV6P41212 452 aa7.51□□□□□ -1.21
SCN8A-201ENST00000354534 PMS2P11Q13670 270 aa7.51□□□□□ -1.21
SCN8A-201ENST00000354534 ATP6V1FQ16864 119 aa7.51□□□□□ -1.21
SCN8A-201ENST00000354534 RPUSD3Q6P087 351 aaKnown RBP7.51□□□□□ -1.21
SCN8A-201ENST00000354534 RNASEKQ6P5S7 137 aaKnown RBP7.51□□□□□ -1.21
SCN8A-201ENST00000354534 H2BFWTQ7Z2G1 175 aa7.51□□□□□ -1.21
SCN8A-201ENST00000354534 SIAH1Q8IUQ4 282 aa7.51□□□□□ -1.21
SCN8A-201ENST00000354534 NAT8LQ8N9F0 302 aa7.51□□□□□ -1.21
SCN8A-201ENST00000354534 NUDT10Q8NFP7 164 aa7.51□□□□□ -1.21
SCN8A-201ENST00000354534 NUDT11Q96G61 164 aa7.51□□□□□ -1.21
SCN8A-201ENST00000354534 CMTM3Q96MX0 182 aa7.51□□□□□ -1.21
SCN8A-201ENST00000354534 DTLQ9NZJ0 730 aa7.51□□□□□ -1.21
SCN8A-201ENST00000354534 KDM4EB2RXH2 506 aaPredicted RBP7.51□□□□□ -1.21
SCN8A-201ENST00000354534 G3V3Y1 287 aa7.51□□□□□ -1.21
SCN8A-201ENST00000354534 SLC16A5O15375 505 aa7.51□□□□□ -1.21
SCN8A-201ENST00000354534 LGALS4P56470 323 aa7.51□□□□□ -1.21
SCN8A-201ENST00000354534 NSDHLQ15738 373 aa7.51□□□□□ -1.21
SCN8A-201ENST00000354534 LGI3Q8N145 548 aa7.51□□□□□ -1.21
SCN8A-201ENST00000354534 HSD17B8Q92506 261 aa7.51□□□□□ -1.21
SCN8A-201ENST00000354534 GPR78Q96P69 363 aa7.51□□□□□ -1.21
SCN8A-201ENST00000354534 LMF2Q9BU23 707 aaKnown RBP7.51□□□□□ -1.21
SCN8A-201ENST00000354534 PRELID3BQ9Y3B1 194 aa7.51□□□□□ -1.21
SCN8A-201ENST00000354534 OR1A2Q9Y585 309 aa7.51□□□□□ -1.21
SCN8A-201ENST00000354534 CABIN1Q9Y6J0 2220 aa7.51□□□□□ -1.21
SCN8A-201ENST00000354534 A0A1W2PRU2 124 aa7.51□□□□□ -1.21
SCN8A-201ENST00000354534 SLC38A8A6NNN8 435 aa7.51□□□□□ -1.21
SCN8A-201ENST00000354534 ACRP10323 421 aa7.51□□□□□ -1.21
SCN8A-201ENST00000354534 SMPD1P17405 629 aa7.51□□□□□ -1.21
SCN8A-201ENST00000354534 KCNQ1P51787 676 aa7.51□□□□□ -1.21
SCN8A-201ENST00000354534 C11orf91Q3C1V1 193 aa7.51□□□□□ -1.21
SCN8A-201ENST00000354534 MDGA2Q7Z553 956 aa7.51□□□□□ -1.21
SCN8A-201ENST00000354534 OR1J1Q8NGS3 322 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms