RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 LILRA2Q8N149 483 aa9.87□□□□□ -0.83
RTN3-204ENST00000354497 DEPDC4Q8N2C3 294 aa9.87□□□□□ -0.83
RTN3-204ENST00000354497 GTPBP8Q8N3Z3 284 aaPredicted RBP9.87□□□□□ -0.83
RTN3-204ENST00000354497 MFSD4AQ8N468 514 aa9.87□□□□□ -0.83
RTN3-204ENST00000354497 OR6F1Q8NGZ6 308 aa9.87□□□□□ -0.83
RTN3-204ENST00000354497 SVIPQ8NHG7 77 aa9.87□□□□□ -0.83
RTN3-204ENST00000354497 CDC26Q8NHZ8 85 aa9.87□□□□□ -0.83
RTN3-204ENST00000354497 RHEBL1Q8TAI7 183 aa9.87□□□□□ -0.83
RTN3-204ENST00000354497 ZBTB8AQ96BR9 441 aa9.87□□□□□ -0.83
RTN3-204ENST00000354497 PHF21BQ96EK2 531 aa9.87□□□□□ -0.83
RTN3-204ENST00000354497 DCUN1D5Q9BTE7 237 aa9.87□□□□□ -0.83
RTN3-204ENST00000354497 SRXN1Q9BYN0 137 aa9.87□□□□□ -0.83
RTN3-204ENST00000354497 ZNF556Q9HAH1 456 aa9.87□□□□□ -0.83
RTN3-204ENST00000354497 BAG5Q9UL15 447 aa9.87□□□□□ -0.83
RTN3-204ENST00000354497 MGAT4BQ9UQ53 548 aa9.87□□□□□ -0.83
RTN3-204ENST00000354497 A3GALT2U3KPV4 340 aa9.87□□□□□ -0.83
RTN3-204ENST00000354497 PMF1-BGLAPU3KQ54 211 aa9.87□□□□□ -0.83
RTN3-204ENST00000354497 IGHV3-15A0A0B4J1V0 119 aa9.86□□□□□ -0.83
RTN3-204ENST00000354497 IGHV4-61A0A0C4DH41 118 aa9.86□□□□□ -0.83
RTN3-204ENST00000354497 GNG14A0A1W2PPG7 69 aa9.86□□□□□ -0.83
RTN3-204ENST00000354497 A0A1W2PRB8 838 aa9.86□□□□□ -0.83
RTN3-204ENST00000354497 TCRBV9S1A1TA0A576 114 aa9.86□□□□□ -0.83
RTN3-204ENST00000354497 EFCAB10A6NFE3 127 aa9.86□□□□□ -0.83
RTN3-204ENST00000354497 ZNF814B7Z6K7 855 aa9.86□□□□□ -0.83
RTN3-204ENST00000354497 C9JVG2 144 aa9.86□□□□□ -0.83
RTN3-204ENST00000354497 E7ESA3 106 aa9.86□□□□□ -0.83
RTN3-204ENST00000354497 M0R1B8 84 aa9.86□□□□□ -0.83
RTN3-204ENST00000354497 ST8SIA5O15466 376 aa9.86□□□□□ -0.83
RTN3-204ENST00000354497 OR7A10O76100 309 aa9.86□□□□□ -0.83
RTN3-204ENST00000354497 KCNH1O95259 989 aa9.86□□□□□ -0.83
RTN3-204ENST00000354497 ENO1P06733 434 aaKnown RBP9.86□□□□□ -0.83
RTN3-204ENST00000354497 YES1P07947 543 aa9.86□□□□□ -0.83
RTN3-204ENST00000354497 BMP4P12644 408 aa9.86□□□□□ -0.83
RTN3-204ENST00000354497 GGT1P19440 569 aa9.86□□□□□ -0.83
RTN3-204ENST00000354497 SHC1P29353 583 aa9.86□□□□□ -0.83
RTN3-204ENST00000354497 NR4A2P43354 598 aa9.86□□□□□ -0.83
RTN3-204ENST00000354497 NCBP2P52298 156 aaKnown RBP eCLIP9.86□□□□□ -0.83
RTN3-204ENST00000354497 TRA2BP62995 288 aaKnown RBP9.86□□□□□ -0.83
RTN3-204ENST00000354497 CHRNB3Q05901 458 aa9.86□□□□□ -0.83
RTN3-204ENST00000354497 SLC18A2Q05940 514 aa9.86□□□□□ -0.83
RTN3-204ENST00000354497 BNIP2Q12982 314 aa9.86□□□□□ -0.83
RTN3-204ENST00000354497 MFSD13AQ14CX5 517 aa9.86□□□□□ -0.83
RTN3-204ENST00000354497 C4orf48Q5BLP8 95 aa9.86□□□□□ -0.83
RTN3-204ENST00000354497 CPTPQ5TA50 214 aa9.86□□□□□ -0.83
RTN3-204ENST00000354497 KLHL17Q6TDP4 642 aa9.86□□□□□ -0.83
RTN3-204ENST00000354497 APOOLQ6UXV4 268 aa9.86□□□□□ -0.83
RTN3-204ENST00000354497 FCRLAQ7L513 359 aa9.86□□□□□ -0.83
RTN3-204ENST00000354497 CENPLQ8N0S6 344 aaPredicted RBP9.86□□□□□ -0.83
RTN3-204ENST00000354497 FNDC5Q8NAU1 212 aa9.86□□□□□ -0.83
RTN3-204ENST00000354497 ATP6V1C2Q8NEY4 427 aa9.86□□□□□ -0.83
RTN3-204ENST00000354497 OR4F6Q8NGB9 312 aa9.86□□□□□ -0.83
RTN3-204ENST00000354497 OR52N5Q8NH56 324 aa9.86□□□□□ -0.83
RTN3-204ENST00000354497 SGMS2Q8NHU3 365 aa9.86□□□□□ -0.83
RTN3-204ENST00000354497 PIK3R3Q92569 461 aa9.86□□□□□ -0.83
RTN3-204ENST00000354497 CPNE4Q96A23 557 aaPredicted RBP9.86□□□□□ -0.83
RTN3-204ENST00000354497 ZNF775Q96BV0 537 aaPredicted RBP9.86□□□□□ -0.83
RTN3-204ENST00000354497 NSUN5Q96P11 429 aaKnown RBP9.86□□□□□ -0.83
RTN3-204ENST00000354497 GAL3ST1Q99999 423 aa9.86□□□□□ -0.83
RTN3-204ENST00000354497 WACQ9BTA9 647 aa9.86□□□□□ -0.83
RTN3-204ENST00000354497 TRMOQ9BU70 441 aa9.86□□□□□ -0.83
RTN3-204ENST00000354497 NARFLQ9H6Q4 476 aa9.86□□□□□ -0.83
RTN3-204ENST00000354497 MED17Q9NVC6 651 aa9.86□□□□□ -0.83
RTN3-204ENST00000354497 GLS2Q9UI32 602 aa9.86□□□□□ -0.83
RTN3-204ENST00000354497 DCTN4Q9UJW0 460 aa9.86□□□□□ -0.83
RTN3-204ENST00000354497 FKBP7Q9Y680 259 aa9.86□□□□□ -0.83
RTN3-204ENST00000354497 IGLV3-32A0A0A0MS00 114 aa9.85□□□□□ -0.83
RTN3-204ENST00000354497 EXOC1LA0A1B0GW35 172 aa9.85□□□□□ -0.83
RTN3-204ENST00000354497 A0A1W2PR80 420 aa9.85□□□□□ -0.83
RTN3-204ENST00000354497 GXYLT2A0PJZ3 443 aa9.85□□□□□ -0.83
RTN3-204ENST00000354497 SAC3D1A6NKF1 404 aa9.85□□□□□ -0.83
RTN3-204ENST00000354497 FAM159BA6NKW6 160 aa9.85□□□□□ -0.83
RTN3-204ENST00000354497 PCDH7O60245 1069 aa9.85□□□□□ -0.83
RTN3-204ENST00000354497 PLOD3O60568 738 aa9.85□□□□□ -0.83
RTN3-204ENST00000354497 PTP4A3O75365 173 aa9.85□□□□□ -0.83
RTN3-204ENST00000354497 RAD51DO75771 328 aa9.85□□□□□ -0.83
RTN3-204ENST00000354497 SERPINI2O75830 405 aa9.85□□□□□ -0.83
RTN3-204ENST00000354497 CD247P20963 164 aa9.85□□□□□ -0.83
RTN3-204ENST00000354497 GABRA3P34903 492 aa9.85□□□□□ -0.83
RTN3-204ENST00000354497 MPIP34949 423 aa9.85□□□□□ -0.83
RTN3-204ENST00000354497 SERPINB10P48595 397 aa9.85□□□□□ -0.83
RTN3-204ENST00000354497 HOXA1P49639 335 aaPredicted RBP9.85□□□□□ -0.83
RTN3-204ENST00000354497 PRR5P85299 388 aa9.85□□□□□ -0.83
RTN3-204ENST00000354497 TRAF3Q13114 568 aa9.85□□□□□ -0.83
RTN3-204ENST00000354497 RAB39AQ14964 217 aa9.85□□□□□ -0.83
RTN3-204ENST00000354497 PLPPR5Q32ZL2 321 aa9.85□□□□□ -0.83
RTN3-204ENST00000354497 TIMM23BQ5SRD1 257 aa9.85□□□□□ -0.83
RTN3-204ENST00000354497 Q6ZT83 130 aa9.85□□□□□ -0.83
RTN3-204ENST00000354497 PRSS48Q7RTY5 328 aa9.85□□□□□ -0.83
RTN3-204ENST00000354497 CLIP4Q8N3C7 705 aa9.85□□□□□ -0.83
RTN3-204ENST00000354497 ZNF680Q8NEM1 530 aa9.85□□□□□ -0.83
RTN3-204ENST00000354497 OR5H6Q8NGV6 325 aa9.85□□□□□ -0.83
RTN3-204ENST00000354497 POC1BQ8TC44 478 aa9.85□□□□□ -0.83
RTN3-204ENST00000354497 TFAP2CQ92754 450 aa9.85□□□□□ -0.83
RTN3-204ENST00000354497 MRRFQ96E11 262 aaKnown RBP9.85□□□□□ -0.83
RTN3-204ENST00000354497 TMEM246Q9BRR3 403 aa9.85□□□□□ -0.83
RTN3-204ENST00000354497 C3orf14Q9HBI5 128 aa9.85□□□□□ -0.83
RTN3-204ENST00000354497 SLC35C2Q9NQQ7 365 aa9.85□□□□□ -0.83
RTN3-204ENST00000354497 PAK1IP1Q9NWT1 392 aaPredicted RBP9.85□□□□□ -0.83
RTN3-204ENST00000354497 SNX6Q9UNH7 406 aa9.85□□□□□ -0.83
RTN3-204ENST00000354497 PRR14LQ5THK1 2151 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms