RNA–Protein interactions for RNA: ENST00000354473.4

VPS72-201, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 3

Gene VPS72, Length 1,347 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-201ENST00000354473 ZNF43P17038 809 aa16.58■□□□□ 0.24
VPS72-201ENST00000354473 LOXP28300 417 aaPredicted RBP16.58■□□□□ 0.24
VPS72-201ENST00000354473 FOXG1P55316 489 aaPredicted RBP16.58■□□□□ 0.24
VPS72-201ENST00000354473 TAS2R41P59536 307 aa16.58■□□□□ 0.24
VPS72-201ENST00000354473 SELENOWP63302 87 aa16.58■□□□□ 0.24
VPS72-201ENST00000354473 LTBQ06643 244 aa16.58■□□□□ 0.24
VPS72-201ENST00000354473 C1DQ13901 141 aaKnown RBP16.58■□□□□ 0.24
VPS72-201ENST00000354473 C9orf135Q5VTT2 229 aa16.58■□□□□ 0.24
VPS72-201ENST00000354473 NIPAL3Q6P499 406 aa16.58■□□□□ 0.24
VPS72-201ENST00000354473 TTC33Q6PID6 262 aaPredicted RBP16.58■□□□□ 0.24
VPS72-201ENST00000354473 PAMR1Q6UXH9 720 aa16.58■□□□□ 0.24
VPS72-201ENST00000354473 ANKS4BQ8N8V4 417 aa16.58■□□□□ 0.24
VPS72-201ENST00000354473 SCAIQ8N9R8 606 aa16.58■□□□□ 0.24
VPS72-201ENST00000354473 POMGNT2Q8NAT1 580 aa16.58■□□□□ 0.24
VPS72-201ENST00000354473 ADPRHL1Q8NDY3 354 aa16.58■□□□□ 0.24
VPS72-201ENST00000354473 OXGR1Q96P68 337 aa16.58■□□□□ 0.24
VPS72-201ENST00000354473 POLR2J2Q9GZM3 115 aaKnown RBP16.58■□□□□ 0.24
VPS72-201ENST00000354473 POLR2J3Q9H1A7 115 aaKnown RBP16.58■□□□□ 0.24
VPS72-201ENST00000354473 EDARQ9UNE0 448 aa16.58■□□□□ 0.24
VPS72-201ENST00000354473 ENO4A6NNW6 628 aa16.57■□□□□ 0.24
VPS72-201ENST00000354473 PDLIM1O00151 329 aa16.57■□□□□ 0.24
VPS72-201ENST00000354473 KPNA4O00629 521 aaPredicted RBP16.57■□□□□ 0.24
VPS72-201ENST00000354473 FAM107AO95990 144 aa16.57■□□□□ 0.24
VPS72-201ENST00000354473 MT-ATP6P00846 226 aa16.57■□□□□ 0.24
VPS72-201ENST00000354473 SELENOPP49908 381 aa16.57■□□□□ 0.24
VPS72-201ENST00000354473 NR1H2P55055 460 aa16.57■□□□□ 0.24
VPS72-201ENST00000354473 CLDN17P56750 224 aa16.57■□□□□ 0.24
VPS72-201ENST00000354473 PMS2P3Q13401 168 aa16.57■□□□□ 0.24
VPS72-201ENST00000354473 PIN1Q13526 163 aaPredicted RBP16.57■□□□□ 0.24
VPS72-201ENST00000354473 PPA1Q15181 289 aa16.57■□□□□ 0.24
VPS72-201ENST00000354473 GKAP1Q5VSY0 366 aaPredicted RBP16.57■□□□□ 0.24
VPS72-201ENST00000354473 VTCN1Q7Z7D3 282 aa16.57■□□□□ 0.24
VPS72-201ENST00000354473 NINJ1Q92982 152 aa16.57■□□□□ 0.24
VPS72-201ENST00000354473 PLPPR2Q96GM1 343 aa16.57■□□□□ 0.24
VPS72-201ENST00000354473 PRSS27Q9BQR3 290 aa16.57■□□□□ 0.24
VPS72-201ENST00000354473 ZNF426Q9BUY5 554 aa16.57■□□□□ 0.24
VPS72-201ENST00000354473 MRPL39Q9NYK5 338 aaKnown RBP16.57■□□□□ 0.24
VPS72-201ENST00000354473 OR5H1A6NKK0 313 aa16.56■□□□□ 0.24
VPS72-201ENST00000354473 KRT33AO76009 404 aa16.56■□□□□ 0.24
VPS72-201ENST00000354473 OR5F1O95221 314 aa16.56■□□□□ 0.24
VPS72-201ENST00000354473 HPRP00739 348 aa16.56■□□□□ 0.24
VPS72-201ENST00000354473 SERPINA1P01009 418 aa16.56■□□□□ 0.24
VPS72-201ENST00000354473 RAF1P04049 648 aa16.56■□□□□ 0.24
VPS72-201ENST00000354473 NCK1P16333 377 aa16.56■□□□□ 0.24
VPS72-201ENST00000354473 IST1P53990 364 aa16.56■□□□□ 0.24
VPS72-201ENST00000354473 LGALS3BPQ08380 585 aa16.56■□□□□ 0.24
VPS72-201ENST00000354473 TIMM23BQ5SRD1 257 aa16.56■□□□□ 0.24
VPS72-201ENST00000354473 SEZ6L2Q6UXD5 910 aa16.56■□□□□ 0.24
VPS72-201ENST00000354473 P2RY8Q86VZ1 359 aa16.56■□□□□ 0.24
VPS72-201ENST00000354473 UEVLDQ8IX04 471 aa16.56■□□□□ 0.24
VPS72-201ENST00000354473 RNF148Q8N7C7 305 aa16.56■□□□□ 0.24
VPS72-201ENST00000354473 FAM162AQ96A26 154 aa16.56■□□□□ 0.24
VPS72-201ENST00000354473 MUCL1Q96DR8 90 aa16.56■□□□□ 0.24
VPS72-201ENST00000354473 SLC19A3Q9BZV2 496 aa16.56■□□□□ 0.24
VPS72-201ENST00000354473 NGBQ9NPG2 151 aa16.56■□□□□ 0.24
VPS72-201ENST00000354473 FAM53CQ9NYF3 392 aa16.56■□□□□ 0.24
VPS72-201ENST00000354473 RIMS3Q9UJD0 308 aa16.56■□□□□ 0.24
VPS72-201ENST00000354473 RCE1Q9Y256 329 aa16.56■□□□□ 0.24
VPS72-201ENST00000354473 MS4A18H0YCH9 400 aa16.55■□□□□ 0.24
VPS72-201ENST00000354473 TRAF3IP2O43734 574 aaPredicted RBP16.55■□□□□ 0.24
VPS72-201ENST00000354473 CH25HO95992 272 aa16.55■□□□□ 0.24
VPS72-201ENST00000354473 DNASE1P24855 282 aa16.55■□□□□ 0.24
VPS72-201ENST00000354473 PUDPQ08623 228 aa16.55■□□□□ 0.24
VPS72-201ENST00000354473 FOXD4Q12950 439 aaPredicted RBP16.55■□□□□ 0.24
VPS72-201ENST00000354473 ZNF74Q16587 644 aa16.55■□□□□ 0.24
VPS72-201ENST00000354473 MS4A18Q3C1V0 323 aa16.55■□□□□ 0.24
VPS72-201ENST00000354473 OR7E24Q6IFN5 339 aa16.55■□□□□ 0.24
VPS72-201ENST00000354473 CBLL1Q75N03 491 aa16.55■□□□□ 0.24
VPS72-201ENST00000354473 ABHD12BQ7Z5M8 362 aaPredicted RBP16.55■□□□□ 0.24
VPS72-201ENST00000354473 NKAIN4Q8IVV8 208 aa16.55■□□□□ 0.24
VPS72-201ENST00000354473 TMEM255BQ8WV15 326 aa16.55■□□□□ 0.24
VPS72-201ENST00000354473 GEMIN6Q8WXD5 167 aaKnown RBP16.55■□□□□ 0.24
VPS72-201ENST00000354473 HSH2DQ96JZ2 352 aa16.55■□□□□ 0.24
VPS72-201ENST00000354473 ALKBH3Q96Q83 286 aaPredicted RBP16.55■□□□□ 0.24
VPS72-201ENST00000354473 UBTD1Q9HAC8 227 aa16.55■□□□□ 0.24
VPS72-201ENST00000354473 CCM2LQ9NUG4 571 aaPredicted RBP16.55■□□□□ 0.24
VPS72-201ENST00000354473 EGFL7Q9UHF1 273 aa16.55■□□□□ 0.24
VPS72-201ENST00000354473 ROS1P08922 2347 aa16.55■□□□□ 0.24
VPS72-201ENST00000354473 LOC102725191A0A1B0GVB3 256 aa16.54■□□□□ 0.24
VPS72-201ENST00000354473 OR6C65A6NJZ3 312 aa16.54■□□□□ 0.24
VPS72-201ENST00000354473 ZNF587BE7ETH6 402 aa16.54■□□□□ 0.24
VPS72-201ENST00000354473 PLPP3O14495 311 aa16.54■□□□□ 0.24
VPS72-201ENST00000354473 ATE1O95260 518 aa16.54■□□□□ 0.24
VPS72-201ENST00000354473 IFNW1P05000 195 aa16.54■□□□□ 0.24
VPS72-201ENST00000354473 HLA-DOBP13765 273 aa16.54■□□□□ 0.24
VPS72-201ENST00000354473 CDH2P19022 906 aaPredicted RBP16.54■□□□□ 0.24
VPS72-201ENST00000354473 MPGP29372 298 aa16.54■□□□□ 0.24
VPS72-201ENST00000354473 RBM34P42696 430 aaKnown RBP16.54■□□□□ 0.24
VPS72-201ENST00000354473 SLC25A3Q00325 362 aa16.54■□□□□ 0.24
VPS72-201ENST00000354473 POU3F1Q03052 451 aaPredicted RBP16.54■□□□□ 0.24
VPS72-201ENST00000354473 TGFBR3Q03167 851 aa16.54■□□□□ 0.24
VPS72-201ENST00000354473 KEAP1Q14145 624 aa16.54■□□□□ 0.24
VPS72-201ENST00000354473 GABRA6Q16445 453 aa16.54■□□□□ 0.24
VPS72-201ENST00000354473 IFI44LQ53G44 452 aa16.54■□□□□ 0.24
VPS72-201ENST00000354473 ZNF704Q6ZNC4 412 aaPredicted RBP16.54■□□□□ 0.24
VPS72-201ENST00000354473 FKBP9P1Q75LS8 142 aa16.54■□□□□ 0.24
VPS72-201ENST00000354473 PGAM4Q8N0Y7 254 aa16.54■□□□□ 0.24
VPS72-201ENST00000354473 FITM2Q8N6M3 262 aa16.54■□□□□ 0.24
VPS72-201ENST00000354473 CCDC197Q8NCU1 140 aa16.54■□□□□ 0.24
VPS72-201ENST00000354473 OR5J2Q8NH18 312 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms