RNA–Protein interactions for RNA: ENST00000354433.7

CDRT1-202, CMT1A duplicated region transcript 1, humanhuman

TSL 2 BASIC

Gene CDRT1, Length 1,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-202ENST00000354433 COX10Q12887 443 aa10.34□□□□□ -0.75
CDRT1-202ENST00000354433 PIN1Q13526 163 aaPredicted RBP10.34□□□□□ -0.75
CDRT1-202ENST00000354433 TRAM2Q15035 370 aa10.34□□□□□ -0.75
CDRT1-202ENST00000354433 GPR68Q15743 365 aa10.34□□□□□ -0.75
CDRT1-202ENST00000354433 FGD3Q5JSP0 725 aa10.34□□□□□ -0.75
CDRT1-202ENST00000354433 EEF1A1P5Q5VTE0 462 aa10.34□□□□□ -0.75
CDRT1-202ENST00000354433 VWA1Q6PCB0 445 aa10.34□□□□□ -0.75
CDRT1-202ENST00000354433 ZAR1Q86SH2 424 aa10.34□□□□□ -0.75
CDRT1-202ENST00000354433 CDC20BQ86Y33 519 aa10.34□□□□□ -0.75
CDRT1-202ENST00000354433 MISPQ8IVT2 679 aa10.34□□□□□ -0.75
CDRT1-202ENST00000354433 AQP11Q8NBQ7 271 aa10.34□□□□□ -0.75
CDRT1-202ENST00000354433 OR9Q2Q8NGE9 314 aa10.34□□□□□ -0.75
CDRT1-202ENST00000354433 FNDC9Q8TBE3 224 aa10.34□□□□□ -0.75
CDRT1-202ENST00000354433 SLC7A13Q8TCU3 470 aa10.34□□□□□ -0.75
CDRT1-202ENST00000354433 TMEM185BQ9H7F4 350 aa10.34□□□□□ -0.75
CDRT1-202ENST00000354433 UBQLN4Q9NRR5 601 aa10.34□□□□□ -0.75
CDRT1-202ENST00000354433 RLIMQ9NVW2 624 aa10.34□□□□□ -0.75
CDRT1-202ENST00000354433 RHCGQ9UBD6 479 aa10.34□□□□□ -0.75
CDRT1-202ENST00000354433 PLEKHA6Q9Y2H5 1048 aa10.34□□□□□ -0.75
CDRT1-202ENST00000354433 F8P00451 2351 aa10.33□□□□□ -0.76
CDRT1-202ENST00000354433 A0A087WZY1 265 aa10.33□□□□□ -0.76
CDRT1-202ENST00000354433 IGLV3-32A0A0A0MS00 114 aa10.33□□□□□ -0.76
CDRT1-202ENST00000354433 NPIPA5A0A0B4J1W7 369 aa10.33□□□□□ -0.76
CDRT1-202ENST00000354433 SH3D21A4FU49 640 aa10.33□□□□□ -0.76
CDRT1-202ENST00000354433 NPIPA7E9PJI5 369 aa10.33□□□□□ -0.76
CDRT1-202ENST00000354433 CASKO14936 926 aa10.33□□□□□ -0.76
CDRT1-202ENST00000354433 PLGP00747 810 aaPredicted RBP10.33□□□□□ -0.76
CDRT1-202ENST00000354433 GASTP01350 101 aa10.33□□□□□ -0.76
CDRT1-202ENST00000354433 NPIPA8P0DM63 369 aa10.33□□□□□ -0.76
CDRT1-202ENST00000354433 FCGR2AP12318 317 aa10.33□□□□□ -0.76
CDRT1-202ENST00000354433 ZNF17P17021 662 aa10.33□□□□□ -0.76
CDRT1-202ENST00000354433 TBXA2RP21731 343 aa10.33□□□□□ -0.76
CDRT1-202ENST00000354433 CRHBPP24387 322 aa10.33□□□□□ -0.76
CDRT1-202ENST00000354433 DNASE1P24855 282 aa10.33□□□□□ -0.76
CDRT1-202ENST00000354433 GGT2P36268 569 aa10.33□□□□□ -0.76
CDRT1-202ENST00000354433 RNF144AP50876 292 aaPredicted RBP10.33□□□□□ -0.76
CDRT1-202ENST00000354433 UGT2B15P54855 530 aa10.33□□□□□ -0.76
CDRT1-202ENST00000354433 CLDN15P56746 228 aa10.33□□□□□ -0.76
CDRT1-202ENST00000354433 TAS2R41P59536 307 aa10.33□□□□□ -0.76
CDRT1-202ENST00000354433 CDK5R2Q13319 367 aa10.33□□□□□ -0.76
CDRT1-202ENST00000354433 ZNF141Q15928 474 aa10.33□□□□□ -0.76
CDRT1-202ENST00000354433 RANBP3LQ86VV4 465 aaPredicted RBP10.33□□□□□ -0.76
CDRT1-202ENST00000354433 CMIPQ8IY22 773 aa10.33□□□□□ -0.76
CDRT1-202ENST00000354433 DEPDC4Q8N2C3 294 aa10.33□□□□□ -0.76
CDRT1-202ENST00000354433 CLIP4Q8N3C7 705 aa10.33□□□□□ -0.76
CDRT1-202ENST00000354433 ZNF527Q8NB42 609 aa10.33□□□□□ -0.76
CDRT1-202ENST00000354433 PHOSPHO1Q8TCT1 267 aa10.33□□□□□ -0.76
CDRT1-202ENST00000354433 NINJ1Q92982 152 aa10.33□□□□□ -0.76
CDRT1-202ENST00000354433 SLC38A4Q969I6 547 aa10.33□□□□□ -0.76
CDRT1-202ENST00000354433 NIPSNAP1Q9BPW8 284 aa10.33□□□□□ -0.76
CDRT1-202ENST00000354433 LIME1Q9H400 295 aa10.33□□□□□ -0.76
CDRT1-202ENST00000354433 MAN2C1Q9NTJ4 1040 aa10.33□□□□□ -0.76
CDRT1-202ENST00000354433 FBXO34Q9NWN3 711 aa10.33□□□□□ -0.76
CDRT1-202ENST00000354433 NDRG3Q9UGV2 375 aa10.33□□□□□ -0.76
CDRT1-202ENST00000354433 ST6GALNAC2Q9UJ37 374 aa10.33□□□□□ -0.76
CDRT1-202ENST00000354433 HEATR5AQ86XA9 2040 aa10.33□□□□□ -0.76
CDRT1-202ENST00000354433 TEP1Q99973 2627 aaKnown RBP10.33□□□□□ -0.76
CDRT1-202ENST00000354433 CDHR4A6H8M9 788 aa10.32□□□□□ -0.76
CDRT1-202ENST00000354433 A8MXE2 369 aa10.32□□□□□ -0.76
CDRT1-202ENST00000354433 MSTNO14793 375 aa10.32□□□□□ -0.76
CDRT1-202ENST00000354433 OR10H3O60404 316 aa10.32□□□□□ -0.76
CDRT1-202ENST00000354433 MRPS14O60783 128 aaKnown RBP10.32□□□□□ -0.76
CDRT1-202ENST00000354433 CYP7B1O75881 506 aa10.32□□□□□ -0.76
CDRT1-202ENST00000354433 OPN1LWP04000 364 aa10.32□□□□□ -0.76
CDRT1-202ENST00000354433 CRHP06850 196 aa10.32□□□□□ -0.76
CDRT1-202ENST00000354433 NGFRP08138 427 aa10.32□□□□□ -0.76
CDRT1-202ENST00000354433 LINGO3P0C6S8 592 aa10.32□□□□□ -0.76
CDRT1-202ENST00000354433 OSMP13725 252 aa10.32□□□□□ -0.76
CDRT1-202ENST00000354433 ATP6V1B1P15313 513 aa10.32□□□□□ -0.76
CDRT1-202ENST00000354433 GSTM3P21266 225 aa10.32□□□□□ -0.76
CDRT1-202ENST00000354433 ELK4P28324 431 aa10.32□□□□□ -0.76
CDRT1-202ENST00000354433 LCN1P31025 176 aa10.32□□□□□ -0.76
CDRT1-202ENST00000354433 ALDH3B2P48448 385 aa10.32□□□□□ -0.76
CDRT1-202ENST00000354433 IL5RAQ01344 420 aa10.32□□□□□ -0.76
CDRT1-202ENST00000354433 MAD2L1BPQ15013 274 aaPredicted RBP10.32□□□□□ -0.76
CDRT1-202ENST00000354433 SEC23BQ15437 767 aa10.32□□□□□ -0.76
CDRT1-202ENST00000354433 TESK1Q15569 626 aa10.32□□□□□ -0.76
CDRT1-202ENST00000354433 CD226Q15762 336 aa10.32□□□□□ -0.76
CDRT1-202ENST00000354433 CTU2Q2VPK5 515 aaKnown RBP10.32□□□□□ -0.76
CDRT1-202ENST00000354433 GLYR1Q49A26 553 aaPredicted RBP10.32□□□□□ -0.76
CDRT1-202ENST00000354433 C1orf94Q6P1W5 598 aa10.32□□□□□ -0.76
CDRT1-202ENST00000354433 PGBD2Q6P3X8 592 aa10.32□□□□□ -0.76
CDRT1-202ENST00000354433 PODNL1Q6PEZ8 512 aa10.32□□□□□ -0.76
CDRT1-202ENST00000354433 KLHL17Q6TDP4 642 aa10.32□□□□□ -0.76
CDRT1-202ENST00000354433 SPNS3Q6ZMD2 512 aa10.32□□□□□ -0.76
CDRT1-202ENST00000354433 TMCO5AQ8N6Q1 288 aa10.32□□□□□ -0.76
CDRT1-202ENST00000354433 B4GALNT2Q8NHY0 566 aa10.32□□□□□ -0.76
CDRT1-202ENST00000354433 ZBTB8AQ96BR9 441 aa10.32□□□□□ -0.76
CDRT1-202ENST00000354433 SPG11Q96JI7 2443 aa10.32□□□□□ -0.76
CDRT1-202ENST00000354433 DACH2Q96NX9 599 aa10.32□□□□□ -0.76
CDRT1-202ENST00000354433 MCHR1Q99705 422 aa10.32□□□□□ -0.76
CDRT1-202ENST00000354433 HOXD1Q9GZZ0 328 aa10.32□□□□□ -0.76
CDRT1-202ENST00000354433 OPN3Q9H1Y3 402 aaPredicted RBP10.32□□□□□ -0.76
CDRT1-202ENST00000354433 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.32□□□□□ -0.76
CDRT1-202ENST00000354433 MED17Q9NVC6 651 aa10.32□□□□□ -0.76
CDRT1-202ENST00000354433 TESQ9UGI8 421 aaKnown RBP10.32□□□□□ -0.76
CDRT1-202ENST00000354433 KCNE5Q9UJ90 142 aa10.32□□□□□ -0.76
CDRT1-202ENST00000354433 MCTS1Q9ULC4 181 aaKnown RBP10.32□□□□□ -0.76
CDRT1-202ENST00000354433 PROCRQ9UNN8 238 aa10.32□□□□□ -0.76
CDRT1-202ENST00000354433 ZNF175Q9Y473 711 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms