RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 MBD1Q9UIS9 605 aaPredicted RBP4.69□□□□□ -1.66
SKP1-202ENST00000353411 COL16A1Q07092 1604 aaPredicted RBP4.69□□□□□ -1.66
SKP1-202ENST00000353411 CCSO14618 274 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 FGF2P09038 288 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 INSRRP14616 1297 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 CSNK2A2P19784 350 aaPredicted RBP4.69□□□□□ -1.66
SKP1-202ENST00000353411 SERPINA2P20848 420 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 TBXA2RP21731 343 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 HMGCS2P54868 508 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 TAS2R46P59540 309 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 NHLRC3Q5JS37 347 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 RGS7BPQ6MZT1 257 aaPredicted RBP4.69□□□□□ -1.66
SKP1-202ENST00000353411 ZNF534Q76KX8 674 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 UBE3DQ7Z6J8 389 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 NUDCD2Q8WVJ2 157 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 MRGPRX2Q96LB1 330 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 NPY6RQ99463 290 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 CDCP1Q9H5V8 836 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 CCL15-CCL14A0A0B4J2E2 113 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 MFNGO00587 321 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 STK17BO94768 372 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 PRSS23O95084 383 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 ITGB7P26010 798 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 ITPKBP27987 946 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 OR10J1P30954 320 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 OR3A1P47881 315 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 ZNF345Q14585 488 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 CCL15Q16663 113 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 DHRS7BQ6IAN0 325 aaPredicted RBP4.69□□□□□ -1.66
SKP1-202ENST00000353411 ZNF620Q6ZNG0 422 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 ZNF738Q8NE65 137 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 UBE2FQ969M7 185 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 RSRP1Q9BUV0 290 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 TLR9Q9NR96 1032 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 GNG13Q9P2W3 67 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 TMED3Q9Y3Q3 217 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 ZAR1LA6NP61 321 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 CLDN5O00501 218 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 LILRB3O75022 631 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 RNH1P13489 461 aaKnown RBP4.69□□□□□ -1.66
SKP1-202ENST00000353411 DGCR2P98153 550 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 HAGHQ16775 308 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 RGMBQ6NW40 437 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 L3MBTL4Q8NA19 623 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 NMNAT2Q9BZQ4 307 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 CWH43Q9H720 699 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 HHATLQ9HCP6 504 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 PPT2Q9UMR5 302 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 FBXO7Q9Y3I1 522 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 PLRG1O43660 514 aaKnown RBP4.69□□□□□ -1.66
SKP1-202ENST00000353411 NDUFA2O43678 99 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 PLGP00747 810 aaPredicted RBP4.69□□□□□ -1.66
SKP1-202ENST00000353411 ACAA1P09110 424 aaPredicted RBP4.69□□□□□ -1.66
SKP1-202ENST00000353411 RNF224P0DH78 156 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 CD82P27701 267 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 SHC1P29353 583 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 CRYBB2P43320 205 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 AGERQ15109 404 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 CNKSR3Q6P9H4 555 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 DCXRQ7Z4W1 244 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 LRRTM1Q86UE6 522 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 TCTEX1D1Q8N7M0 179 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 OR6T1Q8NGN1 323 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 OR1E3Q8WZA6 343 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 DTD2Q96FN9 168 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 RBM18Q96H35 190 aaKnown RBP4.69□□□□□ -1.66
SKP1-202ENST00000353411 PCED1AQ9H1Q7 454 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 GRHPRQ9UBQ7 328 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 A8MXK9 166 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 B4DEV8 164 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 H7BYZ3 331 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 PCDH8O95206 1070 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 CRYABP02511 175 aaKnown RBP4.69□□□□□ -1.66
SKP1-202ENST00000353411 ABOP16442 354 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 AK4P27144 223 aaPredicted RBP4.69□□□□□ -1.66
SKP1-202ENST00000353411 TAS2R30P59541 319 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 GABREP78334 506 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 SLC14A2Q15849 920 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 VWA2Q5GFL6 755 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 ALG10BQ5I7T1 473 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 CST9LP1Q5W188 147 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 ZNF322Q6U7Q0 402 aaPredicted RBP4.69□□□□□ -1.66
SKP1-202ENST00000353411 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.69□□□□□ -1.66
SKP1-202ENST00000353411 SERINC5Q86VE9 423 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 SLC35F2Q8IXU6 374 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 RNF113BQ8IZP6 322 aaKnown RBP4.69□□□□□ -1.66
SKP1-202ENST00000353411 RHOVQ96L33 236 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 C1orf74Q96LT6 269 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 C1QTNF2Q9BXJ5 285 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 CSNK1G1Q9HCP0 422 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 TREX1Q9NSU2 369 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 ZDHHC3Q9NYG2 299 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 PDCD11Q14690 1871 aaKnown RBP4.69□□□□□ -1.66
SKP1-202ENST00000353411 TJP1Q07157 1748 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 CAMTA1Q9Y6Y1 1673 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 NUP188Q5SRE5 1749 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 A0A1B0GVT2 93 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 CNMDO75829 334 aa4.69□□□□□ -1.66
SKP1-202ENST00000353411 CSTBP04080 98 aaKnown RBP4.69□□□□□ -1.66
SKP1-202ENST00000353411 SERPINA5P05154 406 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms