RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 CSTAP01040 98 aa7.44□□□□□ -1.22
CD44-205ENST00000352818 IGHA1P01876 353 aa7.44□□□□□ -1.22
CD44-205ENST00000352818 ZGLP1P0C6A0 271 aa7.44□□□□□ -1.22
CD44-205ENST00000352818 MYL12AP19105 171 aa7.44□□□□□ -1.22
CD44-205ENST00000352818 MAKP20794 623 aa7.44□□□□□ -1.22
CD44-205ENST00000352818 OTX2P32243 289 aa7.44□□□□□ -1.22
CD44-205ENST00000352818 OR1D4P47884 311 aa7.44□□□□□ -1.22
CD44-205ENST00000352818 SLC9A3P48764 834 aa7.44□□□□□ -1.22
CD44-205ENST00000352818 CDH11P55287 796 aa7.44□□□□□ -1.22
CD44-205ENST00000352818 FOXL2P58012 376 aa7.44□□□□□ -1.22
CD44-205ENST00000352818 NCS1P62166 190 aa7.44□□□□□ -1.22
CD44-205ENST00000352818 OCA2Q04671 838 aa7.44□□□□□ -1.22
CD44-205ENST00000352818 ACSM1Q08AH1 577 aa7.44□□□□□ -1.22
CD44-205ENST00000352818 ZNF846Q147U1 533 aa7.44□□□□□ -1.22
CD44-205ENST00000352818 EBPQ15125 230 aaKnown RBP7.44□□□□□ -1.22
CD44-205ENST00000352818 SSX1Q16384 188 aa7.44□□□□□ -1.22
CD44-205ENST00000352818 TSTQ16762 297 aaKnown RBP7.44□□□□□ -1.22
CD44-205ENST00000352818 ALG10BQ5I7T1 473 aa7.44□□□□□ -1.22
CD44-205ENST00000352818 SMARCD3Q6STE5 483 aa7.44□□□□□ -1.22
CD44-205ENST00000352818 COX15Q7KZN9 410 aa7.44□□□□□ -1.22
CD44-205ENST00000352818 NUP54Q7Z3B4 507 aa7.44□□□□□ -1.22
CD44-205ENST00000352818 ADCK1Q86TW2 530 aa7.44□□□□□ -1.22
CD44-205ENST00000352818 PSD4Q8NDX1 1056 aa7.44□□□□□ -1.22
CD44-205ENST00000352818 OR6Q1Q8NGQ2 317 aa7.44□□□□□ -1.22
CD44-205ENST00000352818 OR9Q1Q8NGQ5 310 aa7.44□□□□□ -1.22
CD44-205ENST00000352818 OR52N1Q8NH53 320 aa7.44□□□□□ -1.22
CD44-205ENST00000352818 PFN4Q8NHR9 129 aa7.44□□□□□ -1.22
CD44-205ENST00000352818 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.44□□□□□ -1.22
CD44-205ENST00000352818 RPL3LQ92901 407 aaKnown RBP7.44□□□□□ -1.22
CD44-205ENST00000352818 DAZLQ92904 295 aaKnown RBP7.44□□□□□ -1.22
CD44-205ENST00000352818 TSLPQ969D9 159 aa7.44□□□□□ -1.22
CD44-205ENST00000352818 ADIPOR1Q96A54 375 aa7.44□□□□□ -1.22
CD44-205ENST00000352818 LCORQ96JN0 433 aaPredicted RBP7.44□□□□□ -1.22
CD44-205ENST00000352818 SAMD8Q96LT4 415 aa7.44□□□□□ -1.22
CD44-205ENST00000352818 DCSTAMPQ9H295 470 aa7.44□□□□□ -1.22
CD44-205ENST00000352818 C12orf10Q9HB07 376 aa7.44□□□□□ -1.22
CD44-205ENST00000352818 HMG20AQ9NP66 347 aa7.44□□□□□ -1.22
CD44-205ENST00000352818 AKIP1Q9NQ31 210 aa7.44□□□□□ -1.22
CD44-205ENST00000352818 MEPEQ9NQ76 525 aaPredicted RBP7.44□□□□□ -1.22
CD44-205ENST00000352818 CMC2Q9NRP2 79 aa7.44□□□□□ -1.22
CD44-205ENST00000352818 PNO1Q9NRX1 252 aaKnown RBP7.44□□□□□ -1.22
CD44-205ENST00000352818 C20orf141Q9NUB4 165 aa7.44□□□□□ -1.22
CD44-205ENST00000352818 NDUFB11Q9NX14 153 aa7.44□□□□□ -1.22
CD44-205ENST00000352818 DHCR7Q9UBM7 475 aaKnown RBP7.44□□□□□ -1.22
CD44-205ENST00000352818 RPS6KB2Q9UBS0 482 aa7.44□□□□□ -1.22
CD44-205ENST00000352818 SEC14L4Q9UDX3 406 aa7.44□□□□□ -1.22
CD44-205ENST00000352818 MEMO1Q9Y316 297 aa7.44□□□□□ -1.22
CD44-205ENST00000352818 CLCA3PQ9Y6N3 262 aa7.44□□□□□ -1.22
CD44-205ENST00000352818 PMF1-BGLAPU3KQ54 211 aa7.44□□□□□ -1.22
CD44-205ENST00000352818 INTS1Q8N201 2190 aaKnown RBP7.44□□□□□ -1.22
CD44-205ENST00000352818 C2orf92A0A1B0GVN3 265 aa7.43□□□□□ -1.22
CD44-205ENST00000352818 METTL15A6NJ78 407 aa7.43□□□□□ -1.22
CD44-205ENST00000352818 FAM171A2A8MVW0 826 aa7.43□□□□□ -1.22
CD44-205ENST00000352818 CLDN25C9JDP6 229 aa7.43□□□□□ -1.22
CD44-205ENST00000352818 J3QRE1 110 aa7.43□□□□□ -1.22
CD44-205ENST00000352818 MEN1O00255 615 aa7.43□□□□□ -1.22
CD44-205ENST00000352818 ADAM10O14672 748 aa7.43□□□□□ -1.22
CD44-205ENST00000352818 CPNE3O75131 537 aaKnown RBP7.43□□□□□ -1.22
CD44-205ENST00000352818 HBQ1P09105 142 aa7.43□□□□□ -1.22
CD44-205ENST00000352818 GAAP10253 952 aa7.43□□□□□ -1.22
CD44-205ENST00000352818 PNMTP11086 282 aa7.43□□□□□ -1.22
CD44-205ENST00000352818 CPEP16870 476 aa7.43□□□□□ -1.22
CD44-205ENST00000352818 BMP7P18075 431 aa7.43□□□□□ -1.22
CD44-205ENST00000352818 ALAS2P22557 587 aa7.43□□□□□ -1.22
CD44-205ENST00000352818 NR4A1P22736 598 aa7.43□□□□□ -1.22
CD44-205ENST00000352818 DNASE1P24855 282 aa7.43□□□□□ -1.22
CD44-205ENST00000352818 CALRP27797 417 aaKnown RBP7.43□□□□□ -1.22
CD44-205ENST00000352818 SLC6A6P31641 620 aa7.43□□□□□ -1.22
CD44-205ENST00000352818 SLC6A8P48029 635 aa7.43□□□□□ -1.22
CD44-205ENST00000352818 RFX3P48380 749 aa7.43□□□□□ -1.22
CD44-205ENST00000352818 ETV1P50549 477 aa7.43□□□□□ -1.22
CD44-205ENST00000352818 BMXP51813 675 aa7.43□□□□□ -1.22
CD44-205ENST00000352818 EFNA3P52797 238 aa7.43□□□□□ -1.22
CD44-205ENST00000352818 WNT4P56705 351 aa7.43□□□□□ -1.22
CD44-205ENST00000352818 BDH1Q02338 343 aa7.43□□□□□ -1.22
CD44-205ENST00000352818 SKP2Q13309 424 aa7.43□□□□□ -1.22
CD44-205ENST00000352818 FHL1Q13642 323 aa7.43□□□□□ -1.22
CD44-205ENST00000352818 MED22Q15528 200 aa7.43□□□□□ -1.22
CD44-205ENST00000352818 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.43□□□□□ -1.22
CD44-205ENST00000352818 CLEC12AQ5QGZ9 265 aa7.43□□□□□ -1.22
CD44-205ENST00000352818 WBP2NLQ6ICG8 309 aa7.43□□□□□ -1.22
CD44-205ENST00000352818 NIPAL3Q6P499 406 aa7.43□□□□□ -1.22
CD44-205ENST00000352818 ARHGAP11AQ6P4F7 1023 aa7.43□□□□□ -1.22
CD44-205ENST00000352818 KIRREL2Q6UWL6 708 aa7.43□□□□□ -1.22
CD44-205ENST00000352818 BCDIN3DQ7Z5W3 292 aaKnown RBP7.43□□□□□ -1.22
CD44-205ENST00000352818 BPHLQ86WA6 291 aaPredicted RBP7.43□□□□□ -1.22
CD44-205ENST00000352818 MEX3DQ86XN8 651 aaKnown RBP7.43□□□□□ -1.22
CD44-205ENST00000352818 MFSD4AQ8N468 514 aa7.43□□□□□ -1.22
CD44-205ENST00000352818 AMER2Q8N7J2 671 aa7.43□□□□□ -1.22
CD44-205ENST00000352818 ZNF614Q8N883 585 aa7.43□□□□□ -1.22
CD44-205ENST00000352818 ZNF441Q8N8Z8 693 aa7.43□□□□□ -1.22
CD44-205ENST00000352818 CLEC1AQ8NC01 280 aa7.43□□□□□ -1.22
CD44-205ENST00000352818 ZNF485Q8NCK3 441 aa7.43□□□□□ -1.22
CD44-205ENST00000352818 OR4C3Q8NH37 302 aa7.43□□□□□ -1.22
CD44-205ENST00000352818 LIPHQ8WWY8 451 aa7.43□□□□□ -1.22
CD44-205ENST00000352818 TMEM158Q8WZ71 300 aa7.43□□□□□ -1.22
CD44-205ENST00000352818 HSPBAP1Q96EW2 488 aa7.43□□□□□ -1.22
CD44-205ENST00000352818 SH3YL1Q96HL8 342 aaPredicted RBP7.43□□□□□ -1.22
CD44-205ENST00000352818 GPX7Q96SL4 187 aaPredicted RBP7.43□□□□□ -1.22
CD44-205ENST00000352818 TMEM43Q9BTV4 400 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms