RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 ZNF101Q8IZC7 436 aa11.19□□□□□ -0.62
SMAD9-201ENST00000350148 TMEM255BQ8WV15 326 aa11.19□□□□□ -0.62
SMAD9-201ENST00000350148 ZNF416Q9BWM5 594 aa11.19□□□□□ -0.62
SMAD9-201ENST00000350148 ZNF639Q9UID6 485 aa11.19□□□□□ -0.62
SMAD9-201ENST00000350148 WIF1Q9Y5W5 379 aa11.19□□□□□ -0.62
SMAD9-201ENST00000350148 A3GALT2U3KPV4 340 aa11.19□□□□□ -0.62
SMAD9-201ENST00000350148 A0A087WZY1 265 aa11.19□□□□□ -0.62
SMAD9-201ENST00000350148 E9PI62 339 aa11.19□□□□□ -0.62
SMAD9-201ENST00000350148 SEC14L2O76054 403 aa11.19□□□□□ -0.62
SMAD9-201ENST00000350148 BTN1A1Q13410 526 aa11.19□□□□□ -0.62
SMAD9-201ENST00000350148 HACD4Q5VWC8 232 aa11.19□□□□□ -0.62
SMAD9-201ENST00000350148 WDR88Q6ZMY6 472 aa11.19□□□□□ -0.62
SMAD9-201ENST00000350148 LRRC69Q6ZNQ3 347 aa11.19□□□□□ -0.62
SMAD9-201ENST00000350148 KCTD12Q96CX2 325 aaKnown RBP11.19□□□□□ -0.62
SMAD9-201ENST00000350148 SLC41A2Q96JW4 573 aa11.19□□□□□ -0.62
SMAD9-201ENST00000350148 BCL2L14Q9BZR8 327 aa11.19□□□□□ -0.62
SMAD9-201ENST00000350148 RAB33BQ9H082 229 aa11.19□□□□□ -0.62
SMAD9-201ENST00000350148 GPATCH2Q9NW75 528 aa11.19□□□□□ -0.62
SMAD9-201ENST00000350148 SLC7A11Q9UPY5 501 aa11.19□□□□□ -0.62
SMAD9-201ENST00000350148 BOLA1Q9Y3E2 137 aa11.19□□□□□ -0.62
SMAD9-201ENST00000350148 A0A087WUU8 490 aa11.19□□□□□ -0.62
SMAD9-201ENST00000350148 IFNA17P01571 189 aa11.19□□□□□ -0.62
SMAD9-201ENST00000350148 POU3F2P20265 443 aaPredicted RBP11.19□□□□□ -0.62
SMAD9-201ENST00000350148 GABRA5P31644 462 aa11.19□□□□□ -0.62
SMAD9-201ENST00000350148 EIF1AXP47813 144 aaKnown RBP11.19□□□□□ -0.62
SMAD9-201ENST00000350148 PCBD1P61457 104 aa11.19□□□□□ -0.62
SMAD9-201ENST00000350148 CCL7P80098 99 aa11.19□□□□□ -0.62
SMAD9-201ENST00000350148 KCNAB1Q14722 419 aa11.19□□□□□ -0.62
SMAD9-201ENST00000350148 TNFRSF13CQ96RJ3 184 aa11.19□□□□□ -0.62
SMAD9-201ENST00000350148 CSF3RQ99062 836 aa11.19□□□□□ -0.62
SMAD9-201ENST00000350148 UBQLN3Q9H347 655 aa11.19□□□□□ -0.62
SMAD9-201ENST00000350148 EXTL2Q9UBQ6 330 aa11.19□□□□□ -0.62
SMAD9-201ENST00000350148 MUTYHQ9UIF7 546 aa11.19□□□□□ -0.62
SMAD9-201ENST00000350148 METTL15A6NJ78 407 aa11.18□□□□□ -0.62
SMAD9-201ENST00000350148 ZGLP1P0C6A0 271 aa11.18□□□□□ -0.62
SMAD9-201ENST00000350148 MALLQ13021 153 aa11.18□□□□□ -0.62
SMAD9-201ENST00000350148 EIF2B1Q14232 305 aaKnown RBP11.18□□□□□ -0.62
SMAD9-201ENST00000350148 LRRC46Q96FV0 321 aa11.18□□□□□ -0.62
SMAD9-201ENST00000350148 URM1Q9BTM9 101 aaKnown RBP11.18□□□□□ -0.62
SMAD9-201ENST00000350148 ENAMQ9NRM1 1142 aa11.18□□□□□ -0.62
SMAD9-201ENST00000350148 MBD1Q9UIS9 605 aaPredicted RBP11.18□□□□□ -0.62
SMAD9-201ENST00000350148 HMGA2P52926 109 aa11.18□□□□□ -0.62
SMAD9-201ENST00000350148 MRPS10P82664 201 aaKnown RBP11.18□□□□□ -0.62
SMAD9-201ENST00000350148 FGFBP1Q14512 234 aa11.18□□□□□ -0.62
SMAD9-201ENST00000350148 TIGD3Q6B0B8 471 aa11.18□□□□□ -0.62
SMAD9-201ENST00000350148 IL20RBQ6UXL0 311 aa11.18□□□□□ -0.62
SMAD9-201ENST00000350148 ZNF627Q7L945 461 aa11.18□□□□□ -0.62
SMAD9-201ENST00000350148 RPS19BP1Q86WX3 136 aaKnown RBP11.18□□□□□ -0.62
SMAD9-201ENST00000350148 SYT14Q8NB59 555 aa11.18□□□□□ -0.62
SMAD9-201ENST00000350148 DTWD2Q8NBA8 298 aa11.18□□□□□ -0.62
SMAD9-201ENST00000350148 CYB561A3Q8NBI2 242 aa11.18□□□□□ -0.62
SMAD9-201ENST00000350148 ELP5Q8TE02 316 aa11.18□□□□□ -0.62
SMAD9-201ENST00000350148 CREB3L1Q96BA8 519 aa11.18□□□□□ -0.62
SMAD9-201ENST00000350148 FOXRED1Q96CU9 486 aaPredicted RBP11.18□□□□□ -0.62
SMAD9-201ENST00000350148 NIPAL2Q9H841 368 aa11.18□□□□□ -0.62
SMAD9-201ENST00000350148 FKRPQ9H9S5 495 aa11.18□□□□□ -0.62
SMAD9-201ENST00000350148 ERVK13-1Q9NX77 482 aa11.18□□□□□ -0.62
SMAD9-201ENST00000350148 POLHQ9Y253 713 aa11.18□□□□□ -0.62
SMAD9-201ENST00000350148 A0A1B0GTQ1 180 aa11.18□□□□□ -0.62
SMAD9-201ENST00000350148 CBY3A6NI87 242 aa11.18□□□□□ -0.62
SMAD9-201ENST00000350148 P2RX6O15547 441 aa11.18□□□□□ -0.62
SMAD9-201ENST00000350148 RPS5P46782 204 aaKnown RBP11.18□□□□□ -0.62
SMAD9-201ENST00000350148 PCBP3P57721 371 aaKnown RBP11.18□□□□□ -0.62
SMAD9-201ENST00000350148 C4orf46Q504U0 113 aa11.18□□□□□ -0.62
SMAD9-201ENST00000350148 ZNF620Q6ZNG0 422 aa11.18□□□□□ -0.62
SMAD9-201ENST00000350148 OR5H6Q8NGV6 325 aa11.18□□□□□ -0.62
SMAD9-201ENST00000350148 HOXB13Q92826 284 aaPredicted RBP11.18□□□□□ -0.62
SMAD9-201ENST00000350148 BARD1Q99728 777 aaKnown RBP11.18□□□□□ -0.62
SMAD9-201ENST00000350148 TGIF2Q9GZN2 237 aa11.18□□□□□ -0.62
SMAD9-201ENST00000350148 PARPBPQ9NWS1 579 aa11.18□□□□□ -0.62
SMAD9-201ENST00000350148 ATXN7L1Q9ULK2 861 aaPredicted RBP11.18□□□□□ -0.62
SMAD9-201ENST00000350148 YARS2Q9Y2Z4 477 aaKnown RBP11.18□□□□□ -0.62
SMAD9-201ENST00000350148 TMEM129A0AVI4 362 aa11.18□□□□□ -0.62
SMAD9-201ENST00000350148 HSPB2A8KAH6 182 aa11.18□□□□□ -0.62
SMAD9-201ENST00000350148 PER3P56645 1201 aa11.18□□□□□ -0.62
SMAD9-201ENST00000350148 SNRPD2P62316 118 aaKnown RBP11.18□□□□□ -0.62
SMAD9-201ENST00000350148 ARG2P78540 354 aa11.18□□□□□ -0.62
SMAD9-201ENST00000350148 MELKQ14680 651 aa11.18□□□□□ -0.62
SMAD9-201ENST00000350148 GRK1Q15835 563 aa11.18□□□□□ -0.62
SMAD9-201ENST00000350148 HSPB2Q16082 182 aa11.18□□□□□ -0.62
SMAD9-201ENST00000350148 DESI1Q6ICB0 168 aa11.18□□□□□ -0.62
SMAD9-201ENST00000350148 SAMD12Q8N8I0 201 aa11.18□□□□□ -0.62
SMAD9-201ENST00000350148 OR13C3Q8NGS6 347 aa11.18□□□□□ -0.62
SMAD9-201ENST00000350148 FCAMRQ8WWV6 532 aa11.18□□□□□ -0.62
SMAD9-201ENST00000350148 TAAR9Q96RI9 348 aa11.18□□□□□ -0.62
SMAD9-201ENST00000350148 IL20RAQ9UHF4 553 aa11.18□□□□□ -0.62
SMAD9-201ENST00000350148 CCDC187A0A096LP49 1063 aa11.18□□□□□ -0.62
SMAD9-201ENST00000350148 LOC102725191A0A1B0GVB3 256 aa11.18□□□□□ -0.62
SMAD9-201ENST00000350148 C5orf51A6NDU8 294 aa11.18□□□□□ -0.62
SMAD9-201ENST00000350148 CD8B2A6NJW9 211 aa11.18□□□□□ -0.62
SMAD9-201ENST00000350148 SPINT1O43278 529 aa11.18□□□□□ -0.62
SMAD9-201ENST00000350148 IGLV3-19P01714 112 aa11.18□□□□□ -0.62
SMAD9-201ENST00000350148 CD8BP10966 210 aa11.18□□□□□ -0.62
SMAD9-201ENST00000350148 OR3A3P47888 321 aa11.18□□□□□ -0.62
SMAD9-201ENST00000350148 OR3A2P47893 321 aa11.18□□□□□ -0.62
SMAD9-201ENST00000350148 PLK5Q496M5 336 aa11.18□□□□□ -0.62
SMAD9-201ENST00000350148 ZNF322Q6U7Q0 402 aaPredicted RBP11.18□□□□□ -0.62
SMAD9-201ENST00000350148 RAB11FIP2Q7L804 512 aa11.18□□□□□ -0.62
SMAD9-201ENST00000350148 OR1N1Q8NGS0 311 aa11.18□□□□□ -0.62
SMAD9-201ENST00000350148 CHPT1Q8WUD6 406 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms