RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 PRR23CQ6ZRP0 262 aa6.27□□□□□ -1.41
TRIM55-203ENST00000350034 VASH1Q7L8A9 365 aaPredicted RBP6.27□□□□□ -1.41
TRIM55-203ENST00000350034 MAMDC2Q7Z304 686 aaPredicted RBP6.27□□□□□ -1.41
TRIM55-203ENST00000350034 CCDC190Q86UF4 302 aa6.27□□□□□ -1.41
TRIM55-203ENST00000350034 KLBQ86Z14 1044 aa6.27□□□□□ -1.41
TRIM55-203ENST00000350034 EGFL6Q8IUX8 553 aa6.27□□□□□ -1.41
TRIM55-203ENST00000350034 GPALPP1Q8IXQ4 340 aa6.27□□□□□ -1.41
TRIM55-203ENST00000350034 ARMC10Q8N2F6 343 aa6.27□□□□□ -1.41
TRIM55-203ENST00000350034 SYS1Q8N2H4 156 aa6.27□□□□□ -1.41
TRIM55-203ENST00000350034 SDR9C7Q8NEX9 313 aa6.27□□□□□ -1.41
TRIM55-203ENST00000350034 ATP6V1C2Q8NEY4 427 aa6.27□□□□□ -1.41
TRIM55-203ENST00000350034 OR10H4Q8NGA5 316 aa6.27□□□□□ -1.41
TRIM55-203ENST00000350034 OR2T27Q8NH04 317 aa6.27□□□□□ -1.41
TRIM55-203ENST00000350034 ZPLD1Q8TCW7 415 aa6.27□□□□□ -1.41
TRIM55-203ENST00000350034 CHPT1Q8WUD6 406 aa6.27□□□□□ -1.41
TRIM55-203ENST00000350034 ZNRF4Q8WWF5 429 aa6.27□□□□□ -1.41
TRIM55-203ENST00000350034 TMEM234Q8WY98 164 aa6.27□□□□□ -1.41
TRIM55-203ENST00000350034 SLC25A46Q96AG3 418 aa6.27□□□□□ -1.41
TRIM55-203ENST00000350034 OTULINQ96BN8 352 aa6.27□□□□□ -1.41
TRIM55-203ENST00000350034 C8orf44Q96CB5 159 aa6.27□□□□□ -1.41
TRIM55-203ENST00000350034 RASD2Q96D21 266 aa6.27□□□□□ -1.41
TRIM55-203ENST00000350034 Q96M85 177 aa6.27□□□□□ -1.41
TRIM55-203ENST00000350034 KCTD7Q96MP8 289 aa6.27□□□□□ -1.41
TRIM55-203ENST00000350034 WDFY2Q96P53 400 aa6.27□□□□□ -1.41
TRIM55-203ENST00000350034 SNX18Q96RF0 628 aa6.27□□□□□ -1.41
TRIM55-203ENST00000350034 NMNAT3Q96T66 252 aa6.27□□□□□ -1.41
TRIM55-203ENST00000350034 TM9SF2Q99805 663 aa6.27□□□□□ -1.41
TRIM55-203ENST00000350034 SPRY4Q9C004 299 aa6.27□□□□□ -1.41
TRIM55-203ENST00000350034 NDEL1Q9GZM8 345 aa6.27□□□□□ -1.41
TRIM55-203ENST00000350034 ISG20L2Q9H9L3 353 aaKnown RBP6.27□□□□□ -1.41
TRIM55-203ENST00000350034 RYDENQ9NUL5 291 aaKnown RBP6.27□□□□□ -1.41
TRIM55-203ENST00000350034 WDR70Q9NW82 654 aa6.27□□□□□ -1.41
TRIM55-203ENST00000350034 QPCTLQ9NXS2 382 aa6.27□□□□□ -1.41
TRIM55-203ENST00000350034 SLC39A1Q9NY26 324 aa6.27□□□□□ -1.41
TRIM55-203ENST00000350034 TAS2R5Q9NYW4 299 aa6.27□□□□□ -1.41
TRIM55-203ENST00000350034 CRNNQ9UBG3 495 aaPredicted RBP6.27□□□□□ -1.41
TRIM55-203ENST00000350034 MOKQ9UQ07 419 aa6.27□□□□□ -1.41
TRIM55-203ENST00000350034 POLHQ9Y253 713 aa6.27□□□□□ -1.41
TRIM55-203ENST00000350034 TMED7Q9Y3B3 224 aa6.27□□□□□ -1.41
TRIM55-203ENST00000350034 HRH3Q9Y5N1 445 aa6.27□□□□□ -1.41
TRIM55-203ENST00000350034 COL27A1Q8IZC6 1860 aaPredicted RBP6.26□□□□□ -1.41
TRIM55-203ENST00000350034 TEX13CA0A0J9YWL9 993 aa6.26□□□□□ -1.41
TRIM55-203ENST00000350034 LNP1A1A4G5 178 aa6.26□□□□□ -1.41
TRIM55-203ENST00000350034 C9J4A7 227 aa6.26□□□□□ -1.41
TRIM55-203ENST00000350034 FTCDNL1E5RQL4 147 aa6.26□□□□□ -1.41
TRIM55-203ENST00000350034 E9PI62 339 aa6.26□□□□□ -1.41
TRIM55-203ENST00000350034 BLOC1S5-TXNDC5H3BN57 136 aa6.26□□□□□ -1.41
TRIM55-203ENST00000350034 GABRPO00591 440 aa6.26□□□□□ -1.41
TRIM55-203ENST00000350034 CDX4O14627 284 aaPredicted RBP6.26□□□□□ -1.41
TRIM55-203ENST00000350034 OGG1O15527 345 aa6.26□□□□□ -1.41
TRIM55-203ENST00000350034 ZNF208O43345 1280 aa6.26□□□□□ -1.41
TRIM55-203ENST00000350034 RNF13O43567 381 aa6.26□□□□□ -1.41
TRIM55-203ENST00000350034 CBFA2T3O75081 653 aa6.26□□□□□ -1.41
TRIM55-203ENST00000350034 SC5DO75845 299 aa6.26□□□□□ -1.41
TRIM55-203ENST00000350034 GLCEO94923 617 aa6.26□□□□□ -1.41
TRIM55-203ENST00000350034 CDRT1O95170 752 aa6.26□□□□□ -1.41
TRIM55-203ENST00000350034 SNX4O95219 450 aa6.26□□□□□ -1.41
TRIM55-203ENST00000350034 DLGAP3O95886 979 aa6.26□□□□□ -1.41
TRIM55-203ENST00000350034 IGHMP01871 453 aa6.26□□□□□ -1.41
TRIM55-203ENST00000350034 GYPBP06028 91 aa6.26□□□□□ -1.41
TRIM55-203ENST00000350034 CLEC2LP0C7M8 214 aa6.26□□□□□ -1.41
TRIM55-203ENST00000350034 COX6A1P12074 109 aa6.26□□□□□ -1.41
TRIM55-203ENST00000350034 CELP19835 753 aa6.26□□□□□ -1.41
TRIM55-203ENST00000350034 RPS5P46782 204 aaKnown RBP6.26□□□□□ -1.41
TRIM55-203ENST00000350034 TMED10P49755 219 aaKnown RBP6.26□□□□□ -1.41
TRIM55-203ENST00000350034 RORCP51449 518 aa6.26□□□□□ -1.41
TRIM55-203ENST00000350034 MAP2K6P52564 334 aa6.26□□□□□ -1.41
TRIM55-203ENST00000350034 RPS7P62081 194 aaKnown RBP6.26□□□□□ -1.41
TRIM55-203ENST00000350034 HSF2Q03933 536 aa6.26□□□□□ -1.41
TRIM55-203ENST00000350034 ZP4Q12836 540 aa6.26□□□□□ -1.41
TRIM55-203ENST00000350034 EXT1Q16394 746 aa6.26□□□□□ -1.41
TRIM55-203ENST00000350034 CDONQ4KMG0 1287 aa6.26□□□□□ -1.41
TRIM55-203ENST00000350034 CRTC2Q53ET0 693 aaPredicted RBP6.26□□□□□ -1.41
TRIM55-203ENST00000350034 MESTQ5EB52 335 aa6.26□□□□□ -1.41
TRIM55-203ENST00000350034 C1orf140Q5VVS0 124 aa6.26□□□□□ -1.41
TRIM55-203ENST00000350034 CDCP2Q5VXM1 449 aa6.26□□□□□ -1.41
TRIM55-203ENST00000350034 DMKNQ6E0U4 476 aaPredicted RBP6.26□□□□□ -1.41
TRIM55-203ENST00000350034 C22orf42Q6IC83 251 aa6.26□□□□□ -1.41
TRIM55-203ENST00000350034 FAM199XQ6PEV8 388 aaPredicted RBP6.26□□□□□ -1.41
TRIM55-203ENST00000350034 C16orf87Q6PH81 154 aa6.26□□□□□ -1.41
TRIM55-203ENST00000350034 SSX6Q7RTT6 188 aa6.26□□□□□ -1.41
TRIM55-203ENST00000350034 NANOGNBQ7Z5D8 188 aa6.26□□□□□ -1.41
TRIM55-203ENST00000350034 SLC35F2Q8IXU6 374 aa6.26□□□□□ -1.41
TRIM55-203ENST00000350034 C10orf53Q8N6V4 93 aa6.26□□□□□ -1.41
TRIM55-203ENST00000350034 ZFP41Q8N8Y5 198 aa6.26□□□□□ -1.41
TRIM55-203ENST00000350034 GALNT6Q8NCL4 622 aa6.26□□□□□ -1.41
TRIM55-203ENST00000350034 LSM14AQ8ND56 463 aaKnown RBP6.26□□□□□ -1.41
TRIM55-203ENST00000350034 OR2Y1Q8NGV0 311 aa6.26□□□□□ -1.41
TRIM55-203ENST00000350034 OR5J2Q8NH18 312 aa6.26□□□□□ -1.41
TRIM55-203ENST00000350034 M1APQ8TC57 530 aa6.26□□□□□ -1.41
TRIM55-203ENST00000350034 SLC22A8Q8TCC7 542 aa6.26□□□□□ -1.41
TRIM55-203ENST00000350034 RPS4Y2Q8TD47 263 aa6.26□□□□□ -1.41
TRIM55-203ENST00000350034 RHBDD1Q8TEB9 315 aa6.26□□□□□ -1.41
TRIM55-203ENST00000350034 MR1Q95460 341 aa6.26□□□□□ -1.41
TRIM55-203ENST00000350034 TMEM203Q969S6 136 aa6.26□□□□□ -1.41
TRIM55-203ENST00000350034 ZMYND19Q96E35 227 aaPredicted RBP6.26□□□□□ -1.41
TRIM55-203ENST00000350034 SPACA9Q96E40 222 aaPredicted RBP6.26□□□□□ -1.41
TRIM55-203ENST00000350034 C1GALT1C1Q96EU7 318 aa6.26□□□□□ -1.41
TRIM55-203ENST00000350034 FRMD6Q96NE9 622 aa6.26□□□□□ -1.41
TRIM55-203ENST00000350034 TSPAN32Q96QS1 320 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms