RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 ITPKCQ96DU7 683 aa15.17■□□□□ 0.02
SAMM50-201ENST00000350028 PELI1Q96FA3 418 aa15.17■□□□□ 0.02
SAMM50-201ENST00000350028 ALG12Q9BV10 488 aa15.17■□□□□ 0.02
SAMM50-201ENST00000350028 WDR70Q9NW82 654 aa15.17■□□□□ 0.02
SAMM50-201ENST00000350028 GRHPRQ9UBQ7 328 aa15.17■□□□□ 0.02
SAMM50-201ENST00000350028 SLC19A2O60779 497 aa15.16■□□□□ 0.02
SAMM50-201ENST00000350028 NCR1O76036 304 aa15.16■□□□□ 0.02
SAMM50-201ENST00000350028 SPNP16150 400 aa15.16■□□□□ 0.02
SAMM50-201ENST00000350028 SHC1P29353 583 aa15.16■□□□□ 0.02
SAMM50-201ENST00000350028 ACVR1BP36896 505 aa15.16■□□□□ 0.02
SAMM50-201ENST00000350028 RPS5P46782 204 aaKnown RBP15.16■□□□□ 0.02
SAMM50-201ENST00000350028 SIRPAP78324 504 aa15.16■□□□□ 0.02
SAMM50-201ENST00000350028 SCN1BQ07699 218 aa15.16■□□□□ 0.02
SAMM50-201ENST00000350028 CDK5R1Q15078 307 aa15.16■□□□□ 0.02
SAMM50-201ENST00000350028 QPRTQ15274 297 aa15.16■□□□□ 0.02
SAMM50-201ENST00000350028 BAK1Q16611 211 aa15.16■□□□□ 0.02
SAMM50-201ENST00000350028 CCDC58Q4VC31 144 aa15.16■□□□□ 0.02
SAMM50-201ENST00000350028 ACSM3Q53FZ2 586 aa15.16■□□□□ 0.02
SAMM50-201ENST00000350028 CCBE1Q6UXH8 406 aaPredicted RBP15.16■□□□□ 0.02
SAMM50-201ENST00000350028 MAMDC2Q7Z304 686 aaPredicted RBP15.16■□□□□ 0.02
SAMM50-201ENST00000350028 GRINAQ7Z429 371 aa15.16■□□□□ 0.02
SAMM50-201ENST00000350028 PXKQ7Z7A4 578 aa15.16■□□□□ 0.02
SAMM50-201ENST00000350028 PPP1R3BQ86XI6 285 aa15.16■□□□□ 0.02
SAMM50-201ENST00000350028 EGFL6Q8IUX8 553 aa15.16■□□□□ 0.02
SAMM50-201ENST00000350028 GHDCQ8N2G8 530 aa15.16■□□□□ 0.02
SAMM50-201ENST00000350028 RFLNBQ8N5W9 214 aa15.16■□□□□ 0.02
SAMM50-201ENST00000350028 OR6K6Q8NGW6 343 aa15.16■□□□□ 0.02
SAMM50-201ENST00000350028 THAP4Q8WY91 577 aa15.16■□□□□ 0.02
SAMM50-201ENST00000350028 GHSRQ92847 366 aa15.16■□□□□ 0.02
SAMM50-201ENST00000350028 KCTD12Q96CX2 325 aaKnown RBP15.16■□□□□ 0.02
SAMM50-201ENST00000350028 RNF31Q96EP0 1072 aa15.16■□□□□ 0.02
SAMM50-201ENST00000350028 SOSTQ9BQB4 213 aa15.16■□□□□ 0.02
SAMM50-201ENST00000350028 TIGARQ9NQ88 270 aa15.16■□□□□ 0.02
SAMM50-201ENST00000350028 RPRD1BQ9NQG5 326 aaKnown RBP15.16■□□□□ 0.02
SAMM50-201ENST00000350028 TAS2R10Q9NYW0 307 aa15.16■□□□□ 0.02
SAMM50-201ENST00000350028 TBC1D24Q9ULP9 559 aa15.16■□□□□ 0.02
SAMM50-201ENST00000350028 PI4KAP42356 2102 aa15.16■□□□□ 0.02
SAMM50-201ENST00000350028 MPDZO75970 2070 aa15.16■□□□□ 0.02
SAMM50-201ENST00000350028 SDK1Q7Z5N4 2213 aa15.15■□□□□ 0.02
SAMM50-201ENST00000350028 TMED7-TICAM2A0A0A6YYA0 188 aa15.15■□□□□ 0.02
SAMM50-201ENST00000350028 DVL2O14641 736 aa15.15■□□□□ 0.02
SAMM50-201ENST00000350028 GMFGO60234 142 aa15.15■□□□□ 0.02
SAMM50-201ENST00000350028 SELENOFO60613 162 aa15.15■□□□□ 0.02
SAMM50-201ENST00000350028 CPNE3O75131 537 aaKnown RBP15.15■□□□□ 0.02
SAMM50-201ENST00000350028 RENP00797 406 aa15.15■□□□□ 0.02
SAMM50-201ENST00000350028 F13BP05160 661 aa15.15■□□□□ 0.02
SAMM50-201ENST00000350028 CYC1P08574 325 aa15.15■□□□□ 0.02
SAMM50-201ENST00000350028 NAGAP17050 411 aa15.15■□□□□ 0.02
SAMM50-201ENST00000350028 HTR3AP46098 478 aa15.15■□□□□ 0.02
SAMM50-201ENST00000350028 EVX1P49640 407 aa15.15■□□□□ 0.02
SAMM50-201ENST00000350028 HBMQ6B0K9 141 aa15.15■□□□□ 0.02
SAMM50-201ENST00000350028 PAPD4Q6PIY7 484 aaKnown RBP15.15■□□□□ 0.02
SAMM50-201ENST00000350028 C5orf46Q6UWT4 87 aa15.15■□□□□ 0.02
SAMM50-201ENST00000350028 RPTNQ6XPR3 784 aa15.15■□□□□ 0.02
SAMM50-201ENST00000350028 SLC16A9Q7RTY1 509 aa15.15■□□□□ 0.02
SAMM50-201ENST00000350028 OR5L2Q8NGL0 311 aa15.15■□□□□ 0.02
SAMM50-201ENST00000350028 OR8K3Q8NH51 312 aa15.15■□□□□ 0.02
SAMM50-201ENST00000350028 IFI44Q8TCB0 444 aa15.15■□□□□ 0.02
SAMM50-201ENST00000350028 STK35Q8TDR2 534 aa15.15■□□□□ 0.02
SAMM50-201ENST00000350028 DUSP19Q8WTR2 217 aa15.15■□□□□ 0.02
SAMM50-201ENST00000350028 SMIM19Q96E16 107 aa15.15■□□□□ 0.02
SAMM50-201ENST00000350028 RXFP3Q9NSD7 469 aa15.15■□□□□ 0.02
SAMM50-201ENST00000350028 COPS3Q9UNS2 423 aa15.15■□□□□ 0.02
SAMM50-201ENST00000350028 TMED7Q9Y3B3 224 aa15.15■□□□□ 0.02
SAMM50-201ENST00000350028 GRIP1Q9Y3R0 1128 aa15.15■□□□□ 0.02
SAMM50-201ENST00000350028 LAMA1P25391 3075 aa15.15■□□□□ 0.02
SAMM50-201ENST00000350028 A8MVM7 634 aa15.14■□□□□ 0.01
SAMM50-201ENST00000350028 SEC14L5O43304 696 aa15.14■□□□□ 0.01
SAMM50-201ENST00000350028 SUSD5O60279 629 aa15.14■□□□□ 0.01
SAMM50-201ENST00000350028 HPGDSO60760 199 aa15.14■□□□□ 0.01
SAMM50-201ENST00000350028 SERPINI2O75830 405 aa15.14■□□□□ 0.01
SAMM50-201ENST00000350028 AZGP1P25311 298 aaKnown RBP15.14■□□□□ 0.01
SAMM50-201ENST00000350028 HOXD12P35452 270 aa15.14■□□□□ 0.01
SAMM50-201ENST00000350028 GDI2P50395 445 aaKnown RBP15.14■□□□□ 0.01
SAMM50-201ENST00000350028 DUSP3P51452 185 aaPredicted RBP15.14■□□□□ 0.01
SAMM50-201ENST00000350028 FOXL2P58012 376 aa15.14■□□□□ 0.01
SAMM50-201ENST00000350028 PYDC2Q56P42 97 aa15.14■□□□□ 0.01
SAMM50-201ENST00000350028 CNIH2Q6PI25 160 aa15.14■□□□□ 0.01
SAMM50-201ENST00000350028 CPEB2Q7Z5Q1 589 aaKnown RBP15.14■□□□□ 0.01
SAMM50-201ENST00000350028 KCTD20Q7Z5Y7 419 aa15.14■□□□□ 0.01
SAMM50-201ENST00000350028 ADGRG3Q86Y34 549 aa15.14■□□□□ 0.01
SAMM50-201ENST00000350028 NLGN4YQ8NFZ3 816 aaPredicted RBP15.14■□□□□ 0.01
SAMM50-201ENST00000350028 OR2T4Q8NH00 348 aa15.14■□□□□ 0.01
SAMM50-201ENST00000350028 TMEM234Q8WY98 164 aa15.14■□□□□ 0.01
SAMM50-201ENST00000350028 TSPAN32Q96QS1 320 aa15.14■□□□□ 0.01
SAMM50-201ENST00000350028 SLC26A1Q9H2B4 701 aa15.14■□□□□ 0.01
SAMM50-201ENST00000350028 GNG8Q9UK08 70 aa15.14■□□□□ 0.01
SAMM50-201ENST00000350028 ZNF346Q9UL40 294 aaKnown RBP15.14■□□□□ 0.01
SAMM50-201ENST00000350028 TMEM72A0PK05 275 aa15.14■□□□□ 0.01
SAMM50-201ENST00000350028 C17orf51A8MQB3 221 aa15.14■□□□□ 0.01
SAMM50-201ENST00000350028 ADAM10O14672 748 aa15.14■□□□□ 0.01
SAMM50-201ENST00000350028 NPIPB7O75200 414 aa15.14■□□□□ 0.01
SAMM50-201ENST00000350028 GATBO75879 557 aaKnown RBP15.14■□□□□ 0.01
SAMM50-201ENST00000350028 FGF5P12034 268 aa15.14■□□□□ 0.01
SAMM50-201ENST00000350028 DAB2P98082 770 aa15.14■□□□□ 0.01
SAMM50-201ENST00000350028 C17orf67Q0P5P2 114 aa15.14■□□□□ 0.01
SAMM50-201ENST00000350028 SGCBQ16585 318 aa15.14■□□□□ 0.01
SAMM50-201ENST00000350028 FAM69AQ5T7M9 428 aa15.14■□□□□ 0.01
SAMM50-201ENST00000350028 POMZP3Q6PJE2 187 aa15.14■□□□□ 0.01
SAMM50-201ENST00000350028 CEP76Q8TAP6 659 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 134.8 ms