RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 GSTZ1O43708 216 aaPredicted RBP16.53■□□□□ 0.24
PTP4A3-202ENST00000349124 GATBO75879 557 aaKnown RBP16.53■□□□□ 0.24
PTP4A3-202ENST00000349124 GPANK1O95872 356 aa16.53■□□□□ 0.24
PTP4A3-202ENST00000349124 HNRNPA2B1P22626 353 aaKnown RBP16.53■□□□□ 0.24
PTP4A3-202ENST00000349124 DCTDP32321 178 aa16.53■□□□□ 0.24
PTP4A3-202ENST00000349124 RAB38P57729 211 aa16.53■□□□□ 0.24
PTP4A3-202ENST00000349124 ILF3Q12906 894 aaKnown RBP eCLIP16.53■□□□□ 0.24
PTP4A3-202ENST00000349124 EXOSC2Q13868 293 aaKnown RBP16.53■□□□□ 0.24
PTP4A3-202ENST00000349124 GGTLC2Q14390 218 aa16.53■□□□□ 0.24
PTP4A3-202ENST00000349124 ZNHIT3Q15649 155 aaPredicted RBP16.53■□□□□ 0.24
PTP4A3-202ENST00000349124 TMEM92Q6UXU6 159 aa16.53■□□□□ 0.24
PTP4A3-202ENST00000349124 RNF44Q7L0R7 432 aa16.53■□□□□ 0.24
PTP4A3-202ENST00000349124 PARGQ86W56 976 aa16.53■□□□□ 0.24
PTP4A3-202ENST00000349124 SLC22A18ASQ8N1D0 253 aa16.53■□□□□ 0.24
PTP4A3-202ENST00000349124 C10orf53Q8N6V4 93 aa16.53■□□□□ 0.24
PTP4A3-202ENST00000349124 CLIP3Q96DZ5 547 aa16.53■□□□□ 0.24
PTP4A3-202ENST00000349124 CCDC120Q96HB5 630 aa16.53■□□□□ 0.24
PTP4A3-202ENST00000349124 MED30Q96HR3 178 aa16.53■□□□□ 0.24
PTP4A3-202ENST00000349124 MOGAT1Q96PD6 335 aa16.53■□□□□ 0.24
PTP4A3-202ENST00000349124 TMEM106CQ9BVX2 250 aa16.53■□□□□ 0.24
PTP4A3-202ENST00000349124 OR5V1Q9UGF6 321 aa16.53■□□□□ 0.24
PTP4A3-202ENST00000349124 IGKV1D-42A0A075B6H8 117 aa16.52■□□□□ 0.24
PTP4A3-202ENST00000349124 A0A0J9YY10 115 aa16.52■□□□□ 0.24
PTP4A3-202ENST00000349124 TVP23AA6NH52 213 aa16.52■□□□□ 0.24
PTP4A3-202ENST00000349124 PTH2RP49190 550 aa16.52■□□□□ 0.24
PTP4A3-202ENST00000349124 RPL6Q02878 288 aaKnown RBP16.52■□□□□ 0.24
PTP4A3-202ENST00000349124 KCNAB1Q14722 419 aa16.52■□□□□ 0.24
PTP4A3-202ENST00000349124 SMUG1Q53HV7 270 aa16.52■□□□□ 0.24
PTP4A3-202ENST00000349124 SLC22A10Q63ZE4 541 aa16.52■□□□□ 0.24
PTP4A3-202ENST00000349124 SLC38A6Q8IZM9 456 aa16.52■□□□□ 0.24
PTP4A3-202ENST00000349124 OR8K3Q8NH51 312 aa16.52■□□□□ 0.24
PTP4A3-202ENST00000349124 ANGPTL6Q8NI99 470 aa16.52■□□□□ 0.24
PTP4A3-202ENST00000349124 HOXB13Q92826 284 aaPredicted RBP16.52■□□□□ 0.24
PTP4A3-202ENST00000349124 C3orf49Q96BT1 292 aa16.52■□□□□ 0.24
PTP4A3-202ENST00000349124 LMF2Q9BU23 707 aaKnown RBP16.52■□□□□ 0.24
PTP4A3-202ENST00000349124 ALG12Q9BV10 488 aa16.52■□□□□ 0.24
PTP4A3-202ENST00000349124 GLTPQ9NZD2 209 aa16.52■□□□□ 0.24
PTP4A3-202ENST00000349124 ERVK-19Q9WJR5 959 aa16.52■□□□□ 0.24
PTP4A3-202ENST00000349124 OR10H1Q9Y4A9 318 aa16.52■□□□□ 0.24
PTP4A3-202ENST00000349124 NPIPB9F8W1W9 429 aa16.52■□□□□ 0.23
PTP4A3-202ENST00000349124 PEX14O75381 377 aa16.52■□□□□ 0.23
PTP4A3-202ENST00000349124 ADRA2CP18825 462 aa16.52■□□□□ 0.23
PTP4A3-202ENST00000349124 DYRK1AQ13627 763 aa16.52■□□□□ 0.23
PTP4A3-202ENST00000349124 SLC25A25Q6KCM7 469 aa16.52■□□□□ 0.23
PTP4A3-202ENST00000349124 DPY19L2P2Q6ZN68 376 aa16.52■□□□□ 0.23
PTP4A3-202ENST00000349124 CMIPQ8IY22 773 aa16.52■□□□□ 0.23
PTP4A3-202ENST00000349124 C16orf52Q8NHV5 167 aa16.52■□□□□ 0.23
PTP4A3-202ENST00000349124 SYNPRQ8TBG9 265 aa16.52■□□□□ 0.23
PTP4A3-202ENST00000349124 ZNF436Q9C0F3 470 aaPredicted RBP16.52■□□□□ 0.23
PTP4A3-202ENST00000349124 PRDM9Q9NQV7 894 aa16.52■□□□□ 0.23
PTP4A3-202ENST00000349124 POLE3Q9NRF9 147 aa16.52■□□□□ 0.23
PTP4A3-202ENST00000349124 CA10Q9NS85 328 aa16.52■□□□□ 0.23
PTP4A3-202ENST00000349124 COPZ2Q9P299 210 aa16.52■□□□□ 0.23
PTP4A3-202ENST00000349124 ING1Q9UK53 422 aaPredicted RBP16.52■□□□□ 0.23
PTP4A3-202ENST00000349124 PPIEQ9UNP9 301 aaKnown RBP16.52■□□□□ 0.23
PTP4A3-202ENST00000349124 ZNF281Q9Y2X9 895 aa16.52■□□□□ 0.23
PTP4A3-202ENST00000349124 FANCMQ8IYD8 2048 aa16.52■□□□□ 0.23
PTP4A3-202ENST00000349124 C17orf51A8MQB3 221 aa16.51■□□□□ 0.23
PTP4A3-202ENST00000349124 HOXC4P09017 264 aaPredicted RBP16.51■□□□□ 0.23
PTP4A3-202ENST00000349124 ANXA7P20073 488 aaKnown RBP16.51■□□□□ 0.23
PTP4A3-202ENST00000349124 PSMB1P20618 241 aaKnown RBP16.51■□□□□ 0.23
PTP4A3-202ENST00000349124 TPMTP51580 245 aa16.51■□□□□ 0.23
PTP4A3-202ENST00000349124 BLVRAP53004 296 aa16.51■□□□□ 0.23
PTP4A3-202ENST00000349124 CBLN3Q6UW01 205 aa16.51■□□□□ 0.23
PTP4A3-202ENST00000349124 FTMTQ8N4E7 242 aa16.51■□□□□ 0.23
PTP4A3-202ENST00000349124 OR10AC1Q8NH08 325 aa16.51■□□□□ 0.23
PTP4A3-202ENST00000349124 TTC9Q92623 222 aa16.51■□□□□ 0.23
PTP4A3-202ENST00000349124 RBP7Q96R05 134 aa16.51■□□□□ 0.23
PTP4A3-202ENST00000349124 NMNAT2Q9BZQ4 307 aa16.51■□□□□ 0.23
PTP4A3-202ENST00000349124 SEC16AO15027 2179 aa16.51■□□□□ 0.23
PTP4A3-202ENST00000349124 H0YC42 278 aa16.51■□□□□ 0.23
PTP4A3-202ENST00000349124 AIPO00170 330 aa16.51■□□□□ 0.23
PTP4A3-202ENST00000349124 CCR4P51679 360 aa16.51■□□□□ 0.23
PTP4A3-202ENST00000349124 SNTA1Q13424 505 aa16.51■□□□□ 0.23
PTP4A3-202ENST00000349124 ZNF141Q15928 474 aa16.51■□□□□ 0.23
PTP4A3-202ENST00000349124 BCORP1Q8N888 145 aa16.51■□□□□ 0.23
PTP4A3-202ENST00000349124 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.51■□□□□ 0.23
PTP4A3-202ENST00000349124 C1orf216Q8TAB5 229 aa16.51■□□□□ 0.23
PTP4A3-202ENST00000349124 HGDQ93099 445 aa16.51■□□□□ 0.23
PTP4A3-202ENST00000349124 ELSPBP1Q96BH3 223 aa16.51■□□□□ 0.23
PTP4A3-202ENST00000349124 MRPL39Q9NYK5 338 aaKnown RBP16.51■□□□□ 0.23
PTP4A3-202ENST00000349124 SLCO1B1Q9Y6L6 691 aa16.51■□□□□ 0.23
PTP4A3-202ENST00000349124 V9GY05 133 aa16.51■□□□□ 0.23
PTP4A3-202ENST00000349124 SERINC4A6NH21 518 aa16.5■□□□□ 0.23
PTP4A3-202ENST00000349124 KHDRBS3O75525 346 aaKnown RBP16.5■□□□□ 0.23
PTP4A3-202ENST00000349124 CDK2P24941 298 aa16.5■□□□□ 0.23
PTP4A3-202ENST00000349124 LGALS3BPQ08380 585 aa16.5■□□□□ 0.23
PTP4A3-202ENST00000349124 PUDPQ08623 228 aa16.5■□□□□ 0.23
PTP4A3-202ENST00000349124 CD226Q15762 336 aa16.5■□□□□ 0.23
PTP4A3-202ENST00000349124 LIPNQ5VXI9 398 aa16.5■□□□□ 0.23
PTP4A3-202ENST00000349124 PWWP2BQ6NUJ5 590 aa16.5■□□□□ 0.23
PTP4A3-202ENST00000349124 ZNF550Q7Z398 422 aa16.5■□□□□ 0.23
PTP4A3-202ENST00000349124 SIX5Q8N196 739 aa16.5■□□□□ 0.23
PTP4A3-202ENST00000349124 NXPE2Q96DL1 559 aa16.5■□□□□ 0.23
PTP4A3-202ENST00000349124 ULBP3Q9BZM4 244 aa16.5■□□□□ 0.23
PTP4A3-202ENST00000349124 FRRS1LQ9P0K9 344 aa16.5■□□□□ 0.23
PTP4A3-202ENST00000349124 PCDHGA5Q9Y5G8 931 aa16.5■□□□□ 0.23
PTP4A3-202ENST00000349124 CLDN16Q9Y5I7 305 aa16.5■□□□□ 0.23
PTP4A3-202ENST00000349124 TDRD6O60522 2096 aaKnown RBP16.5■□□□□ 0.23
PTP4A3-202ENST00000349124 MPDZO75970 2070 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms