RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 LRIT2A6NDA9 550 aa14.56□□□□□ -0.08
HMGA1-202ENST00000347617 PRAMEF26H0Y7S4 382 aa14.56□□□□□ -0.08
HMGA1-202ENST00000347617 H7C2Y5 167 aa14.56□□□□□ -0.08
HMGA1-202ENST00000347617 LGALS8O00214 317 aa14.56□□□□□ -0.08
HMGA1-202ENST00000347617 PTH2RP49190 550 aa14.56□□□□□ -0.08
HMGA1-202ENST00000347617 SLC16A1P53985 500 aa14.56□□□□□ -0.08
HMGA1-202ENST00000347617 FXYD6P3P58550 94 aa14.56□□□□□ -0.08
HMGA1-202ENST00000347617 LGALS3BPQ08380 585 aa14.56□□□□□ -0.08
HMGA1-202ENST00000347617 TMEM69Q5SWH9 247 aa14.56□□□□□ -0.08
HMGA1-202ENST00000347617 SLC48A1Q6P1K1 146 aa14.56□□□□□ -0.08
HMGA1-202ENST00000347617 FRRS1Q6ZNA5 592 aa14.56□□□□□ -0.08
HMGA1-202ENST00000347617 SLC36A1Q7Z2H8 476 aa14.56□□□□□ -0.08
HMGA1-202ENST00000347617 LURAP1LQ8IV03 231 aa14.56□□□□□ -0.08
HMGA1-202ENST00000347617 SAMD14Q8IZD0 417 aaPredicted RBP14.56□□□□□ -0.08
HMGA1-202ENST00000347617 EDAQ92838 391 aa14.56□□□□□ -0.08
HMGA1-202ENST00000347617 PMM1Q92871 262 aa14.56□□□□□ -0.08
HMGA1-202ENST00000347617 HAVCR1Q96D42 359 aa14.56□□□□□ -0.08
HMGA1-202ENST00000347617 HCAR1Q9BXC0 346 aa14.56□□□□□ -0.08
HMGA1-202ENST00000347617 NKX6-2Q9C056 277 aaPredicted RBP14.56□□□□□ -0.08
HMGA1-202ENST00000347617 OR51V1Q9H2C8 321 aa14.56□□□□□ -0.08
HMGA1-202ENST00000347617 KIR3DX1Q9H7L2 352 aa14.56□□□□□ -0.08
HMGA1-202ENST00000347617 SCPEP1Q9HB40 452 aa14.56□□□□□ -0.08
HMGA1-202ENST00000347617 GPR160Q9UJ42 338 aa14.56□□□□□ -0.08
HMGA1-202ENST00000347617 AK6Q9Y3D8 172 aaKnown RBP14.56□□□□□ -0.08
HMGA1-202ENST00000347617 A0A1W2PPV9 198 aa14.55□□□□□ -0.08
HMGA1-202ENST00000347617 ZC3H12DA2A288 527 aaKnown RBP14.55□□□□□ -0.08
HMGA1-202ENST00000347617 ZNF217O75362 1048 aa14.55□□□□□ -0.08
HMGA1-202ENST00000347617 F3P13726 295 aa14.55□□□□□ -0.08
HMGA1-202ENST00000347617 SRMP19623 302 aa14.55□□□□□ -0.08
HMGA1-202ENST00000347617 MPGP29372 298 aa14.55□□□□□ -0.08
HMGA1-202ENST00000347617 SLC6A6P31641 620 aa14.55□□□□□ -0.08
HMGA1-202ENST00000347617 RABIFP47224 123 aa14.55□□□□□ -0.08
HMGA1-202ENST00000347617 P2RX1P51575 399 aa14.55□□□□□ -0.08
HMGA1-202ENST00000347617 ART1P52961 327 aa14.55□□□□□ -0.08
HMGA1-202ENST00000347617 STXBP1P61764 594 aaKnown RBP14.55□□□□□ -0.08
HMGA1-202ENST00000347617 CSNK1G2P78368 415 aa14.55□□□□□ -0.08
HMGA1-202ENST00000347617 SSBP1Q04837 148 aaKnown RBP14.55□□□□□ -0.08
HMGA1-202ENST00000347617 STX4Q12846 297 aa14.55□□□□□ -0.08
HMGA1-202ENST00000347617 RPE65Q16518 533 aa14.55□□□□□ -0.08
HMGA1-202ENST00000347617 ARHGAP11BQ3KRB8 267 aa14.55□□□□□ -0.08
HMGA1-202ENST00000347617 TMEM255AQ5JRV8 349 aa14.55□□□□□ -0.08
HMGA1-202ENST00000347617 KIAA0895LQ68EN5 471 aa14.55□□□□□ -0.08
HMGA1-202ENST00000347617 ENPP7Q6UWV6 458 aa14.55□□□□□ -0.08
HMGA1-202ENST00000347617 LRRN1Q6UXK5 716 aa14.55□□□□□ -0.08
HMGA1-202ENST00000347617 ZNF836Q6ZNA1 936 aa14.55□□□□□ -0.08
HMGA1-202ENST00000347617 ESPNLQ6ZVH7 1005 aa14.55□□□□□ -0.08
HMGA1-202ENST00000347617 CCDC116Q8IYX3 515 aa14.55□□□□□ -0.08
HMGA1-202ENST00000347617 OR2AK2Q8NG84 335 aa14.55□□□□□ -0.08
HMGA1-202ENST00000347617 C1orf216Q8TAB5 229 aa14.55□□□□□ -0.08
HMGA1-202ENST00000347617 RPS4Y2Q8TD47 263 aa14.55□□□□□ -0.08
HMGA1-202ENST00000347617 ZFPM2Q8WW38 1151 aa14.55□□□□□ -0.08
HMGA1-202ENST00000347617 MIB2Q96AX9 1013 aa14.55□□□□□ -0.08
HMGA1-202ENST00000347617 SLC25A38Q96DW6 304 aa14.55□□□□□ -0.08
HMGA1-202ENST00000347617 CNRIP1Q96F85 164 aaPredicted RBP14.55□□□□□ -0.08
HMGA1-202ENST00000347617 PHYHIPLQ96FC7 376 aa14.55□□□□□ -0.08
HMGA1-202ENST00000347617 LRRC46Q96FV0 321 aa14.55□□□□□ -0.08
HMGA1-202ENST00000347617 SHDQ96IW2 340 aa14.55□□□□□ -0.08
HMGA1-202ENST00000347617 MS4A4EQ96PG1 132 aa14.55□□□□□ -0.08
HMGA1-202ENST00000347617 CNN2Q99439 309 aaKnown RBP14.55□□□□□ -0.08
HMGA1-202ENST00000347617 SLITRK2Q9H156 845 aa14.55□□□□□ -0.08
HMGA1-202ENST00000347617 GAREM1Q9H706 876 aa14.55□□□□□ -0.08
HMGA1-202ENST00000347617 RASL12Q9NYN1 266 aa14.55□□□□□ -0.08
HMGA1-202ENST00000347617 CES1P1Q9UKY3 287 aa14.55□□□□□ -0.08
HMGA1-202ENST00000347617 KCNK6Q9Y257 313 aa14.55□□□□□ -0.08
HMGA1-202ENST00000347617 SIGLEC7Q9Y286 467 aa14.55□□□□□ -0.08
HMGA1-202ENST00000347617 ZNF780BQ9Y6R6 833 aa14.55□□□□□ -0.08
HMGA1-202ENST00000347617 V9GY05 133 aa14.55□□□□□ -0.08
HMGA1-202ENST00000347617 FXYD6-FXYD2A0A087WZ82 144 aa14.55□□□□□ -0.08
HMGA1-202ENST00000347617 A0A0B4J203 849 aa14.55□□□□□ -0.08
HMGA1-202ENST00000347617 FEZF1A0PJY2 475 aa14.55□□□□□ -0.08
HMGA1-202ENST00000347617 PQLC2LA1A4F0 135 aa14.55□□□□□ -0.08
HMGA1-202ENST00000347617 H7BY64 318 aa14.55□□□□□ -0.08
HMGA1-202ENST00000347617 SLC34A2O95436 690 aa14.55□□□□□ -0.08
HMGA1-202ENST00000347617 DBIP07108 87 aaKnown RBP14.55□□□□□ -0.08
HMGA1-202ENST00000347617 MRPL3P09001 348 aaKnown RBP14.55□□□□□ -0.08
HMGA1-202ENST00000347617 CSF1P09603 554 aa14.55□□□□□ -0.08
HMGA1-202ENST00000347617 ANXA7P20073 488 aaKnown RBP14.55□□□□□ -0.08
HMGA1-202ENST00000347617 HIST1H1TP22492 207 aaPredicted RBP14.55□□□□□ -0.08
HMGA1-202ENST00000347617 ZNF136P52737 540 aa14.55□□□□□ -0.08
HMGA1-202ENST00000347617 RPS11P62280 158 aaKnown RBP eCLIP14.55□□□□□ -0.08
HMGA1-202ENST00000347617 EEF1A1P68104 462 aaKnown RBP14.55□□□□□ -0.08
HMGA1-202ENST00000347617 PRDX1Q06830 199 aaKnown RBP14.55□□□□□ -0.08
HMGA1-202ENST00000347617 STK11Q15831 433 aa14.55□□□□□ -0.08
HMGA1-202ENST00000347617 PGAP1Q75T13 922 aa14.55□□□□□ -0.08
HMGA1-202ENST00000347617 IZUMO1Q8IYV9 350 aa14.55□□□□□ -0.08
HMGA1-202ENST00000347617 HMGB4Q8WW32 186 aa14.55□□□□□ -0.08
HMGA1-202ENST00000347617 OR1E3Q8WZA6 343 aa14.55□□□□□ -0.08
HMGA1-202ENST00000347617 PIGKQ92643 395 aa14.55□□□□□ -0.08
HMGA1-202ENST00000347617 PELI1Q96FA3 418 aa14.55□□□□□ -0.08
HMGA1-202ENST00000347617 PRAP1Q96NZ9 151 aa14.55□□□□□ -0.08
HMGA1-202ENST00000347617 GINS4Q9BRT9 223 aa14.55□□□□□ -0.08
HMGA1-202ENST00000347617 FXYD6Q9H0Q3 95 aa14.55□□□□□ -0.08
HMGA1-202ENST00000347617 ALX4Q9H161 411 aaPredicted RBP14.55□□□□□ -0.08
HMGA1-202ENST00000347617 MCCC2Q9HCC0 563 aa14.55□□□□□ -0.08
HMGA1-202ENST00000347617 EXOSC3Q9NQT5 275 aaKnown RBP14.55□□□□□ -0.08
HMGA1-202ENST00000347617 MRPL15Q9P015 296 aaKnown RBP14.55□□□□□ -0.08
HMGA1-202ENST00000347617 WNT16Q9UBV4 365 aa14.55□□□□□ -0.08
HMGA1-202ENST00000347617 PLAGL1Q9UM63 463 aa14.55□□□□□ -0.08
HMGA1-202ENST00000347617 ICAM5Q9UMF0 924 aa14.55□□□□□ -0.08
HMGA1-202ENST00000347617 MED31Q9Y3C7 131 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms