RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 GRAMD2AQ8IUY3 354 aa5.5□□□□□ -1.53
CLCN3-201ENST00000347613 SLC35F2Q8IXU6 374 aa5.5□□□□□ -1.53
CLCN3-201ENST00000347613 OR6V1Q8N148 313 aa5.5□□□□□ -1.53
CLCN3-201ENST00000347613 ZNF655Q8N720 491 aaPredicted RBP5.5□□□□□ -1.53
CLCN3-201ENST00000347613 C19orf47Q8N9M1 422 aaKnown RBP5.5□□□□□ -1.53
CLCN3-201ENST00000347613 OR11G2Q8NGC1 345 aa5.5□□□□□ -1.53
CLCN3-201ENST00000347613 ZDHHC1Q8WTX9 485 aa5.5□□□□□ -1.53
CLCN3-201ENST00000347613 SMIM19Q96E16 107 aa5.5□□□□□ -1.53
CLCN3-201ENST00000347613 SCMH1Q96GD3 660 aa5.5□□□□□ -1.53
CLCN3-201ENST00000347613 NXF5Q9H1B4 397 aaKnown RBP5.5□□□□□ -1.53
CLCN3-201ENST00000347613 SRA1Q9HD15 236 aaKnown RBP5.5□□□□□ -1.53
CLCN3-201ENST00000347613 BRD7Q9NPI1 651 aa5.5□□□□□ -1.53
CLCN3-201ENST00000347613 HAO2Q9NYQ3 351 aa5.5□□□□□ -1.53
CLCN3-201ENST00000347613 MRM2Q9UI43 246 aaKnown RBP5.5□□□□□ -1.53
CLCN3-201ENST00000347613 ELF5Q9UKW6 265 aaPredicted RBP5.5□□□□□ -1.53
CLCN3-201ENST00000347613 TMEM5Q9Y2B1 443 aa5.5□□□□□ -1.53
CLCN3-201ENST00000347613 CACNG2Q9Y698 323 aa5.5□□□□□ -1.53
CLCN3-201ENST00000347613 SPAG17Q6Q759 2223 aa5.5□□□□□ -1.53
CLCN3-201ENST00000347613 TRBV2A0A0J9YWF9 115 aa5.5□□□□□ -1.53
CLCN3-201ENST00000347613 SLC22A31A6NKX4 558 aa5.5□□□□□ -1.53
CLCN3-201ENST00000347613 SNTNA6NMZ2 147 aa5.5□□□□□ -1.53
CLCN3-201ENST00000347613 H0YIG0 161 aa5.5□□□□□ -1.53
CLCN3-201ENST00000347613 NDUFB5O43674 189 aa5.5□□□□□ -1.53
CLCN3-201ENST00000347613 FMO6PO60774 539 aa5.5□□□□□ -1.53
CLCN3-201ENST00000347613 RCBTB2O95199 551 aa5.5□□□□□ -1.53
CLCN3-201ENST00000347613 MPC2O95563 127 aa5.5□□□□□ -1.53
CLCN3-201ENST00000347613 PROS1P07225 676 aa5.5□□□□□ -1.53
CLCN3-201ENST00000347613 HK1P19367 917 aa5.5□□□□□ -1.53
CLCN3-201ENST00000347613 DPP4P27487 766 aa5.5□□□□□ -1.53
CLCN3-201ENST00000347613 KLF9Q13886 244 aaPredicted RBP5.5□□□□□ -1.53
CLCN3-201ENST00000347613 NTRK2Q16620 822 aa5.5□□□□□ -1.53
CLCN3-201ENST00000347613 EIPR1Q53HC9 387 aa5.5□□□□□ -1.53
CLCN3-201ENST00000347613 MESTQ5EB52 335 aa5.5□□□□□ -1.53
CLCN3-201ENST00000347613 SEZ6L2Q6UXD5 910 aa5.5□□□□□ -1.53
CLCN3-201ENST00000347613 UNQ9370/PRO34162Q6UXP9 181 aa5.5□□□□□ -1.53
CLCN3-201ENST00000347613 BPHLQ86WA6 291 aaPredicted RBP5.5□□□□□ -1.53
CLCN3-201ENST00000347613 LIX1LQ8IVB5 337 aa5.5□□□□□ -1.53
CLCN3-201ENST00000347613 PRSS35Q8N3Z0 413 aa5.5□□□□□ -1.53
CLCN3-201ENST00000347613 OR4D10Q8NGI6 311 aa5.5□□□□□ -1.53
CLCN3-201ENST00000347613 TAAR8Q969N4 342 aa5.5□□□□□ -1.53
CLCN3-201ENST00000347613 RFT1Q96AA3 541 aa5.5□□□□□ -1.53
CLCN3-201ENST00000347613 C1QTNF7Q9BXJ2 289 aa5.5□□□□□ -1.53
CLCN3-201ENST00000347613 TMEM27Q9HBJ8 222 aa5.5□□□□□ -1.53
CLCN3-201ENST00000347613 DHCR7Q9UBM7 475 aaKnown RBP5.5□□□□□ -1.53
CLCN3-201ENST00000347613 ZNF69Q9UC07 566 aa5.5□□□□□ -1.53
CLCN3-201ENST00000347613 GMEB2Q9UKD1 530 aa5.5□□□□□ -1.53
CLCN3-201ENST00000347613 HSPB11Q9Y547 144 aa5.5□□□□□ -1.53
CLCN3-201ENST00000347613 CEP192Q8TEP8 1941 aa5.5□□□□□ -1.53
CLCN3-201ENST00000347613 LOC101059948A0A1B0GTJ6 334 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 RIIAD1A6NNX1 92 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 CHURC1-FNTBB4DL54 471 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 TNFRSF10CO14798 259 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 AKR7A3O95154 331 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 TNFP01375 233 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 C1QBP02746 253 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 TCRBP04435 133 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 UCHL1P09936 223 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 SRMP19623 302 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 FNTBP49356 437 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 ILF3Q12906 894 aaKnown RBP eCLIP5.49□□□□□ -1.53
CLCN3-201ENST00000347613 GSG1Q2KHT4 349 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 VWA2Q5GFL6 755 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 FAM69BQ5VUD6 431 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 LEG1Q6P5S2 330 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 CHRDL2Q6WN34 429 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 SHISA6Q6ZSJ9 500 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 FCRLAQ7L513 359 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 KDM8Q8N371 416 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 OR8K3Q8NH51 312 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 OR14A16Q8NHC5 309 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 ASB12Q8WXK4 309 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 MMABQ96EY8 250 aaPredicted RBP5.49□□□□□ -1.53
CLCN3-201ENST00000347613 TSPAN32Q96QS1 320 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 SEMA6CQ9H3T2 930 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 CA10Q9NS85 328 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 LANCL2Q9NS86 450 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 DZANK1Q9NVP4 752 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 DMXL1Q9Y485 3027 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 ADAMTS20P59510 1910 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 IRGMA1A4Y4 181 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 FAM86C2PA6NEL3 165 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 SERINC4A6NH21 518 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 TSC22D2O75157 780 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 MPZL1O95297 269 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 AGR2O95994 175 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 CSTAP01040 98 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 TRAPPC2P0DI81 140 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 TRAPPC2BP0DI82 140 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 PRKAR1AP10644 381 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 ZNF3P17036 446 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 SOX2P48431 317 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 PTH2RP49190 550 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 DIO1P49895 249 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 SLC37A1P57057 533 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 IGLV3-21P80748 117 aaPredicted RBP5.49□□□□□ -1.53
CLCN3-201ENST00000347613 FUT7Q11130 342 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 SKP2Q13309 424 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 MEP1BQ16820 701 aa5.49□□□□□ -1.53
CLCN3-201ENST00000347613 LGALSLQ3ZCW2 172 aaPredicted RBP5.49□□□□□ -1.53
CLCN3-201ENST00000347613 RNF144BQ7Z419 303 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms