RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 WDR5BQ86VZ2 330 aa21.43■■□□□ 1.02
NPAS3-201ENST00000346562 ZNF775Q96BV0 537 aaPredicted RBP21.43■■□□□ 1.02
NPAS3-201ENST00000346562 CNTNAP3Q9BZ76 1288 aa21.43■■□□□ 1.02
NPAS3-201ENST00000346562 PADI1Q9ULC6 663 aa21.43■■□□□ 1.02
NPAS3-201ENST00000346562 GIFP27352 417 aa21.43■■□□□ 1.02
NPAS3-201ENST00000346562 MED25Q71SY5 747 aa21.43■■□□□ 1.02
NPAS3-201ENST00000346562 PNPLA1Q8N8W4 532 aa21.43■■□□□ 1.02
NPAS3-201ENST00000346562 A0A1W2PQ09 198 aa21.43■■□□□ 1.02
NPAS3-201ENST00000346562 RACK1P63244 317 aaKnown RBP21.43■■□□□ 1.02
NPAS3-201ENST00000346562 KCNG3Q8TAE7 436 aa21.43■■□□□ 1.02
NPAS3-201ENST00000346562 GGHQ92820 318 aa21.43■■□□□ 1.02
NPAS3-201ENST00000346562 ALG12Q9BV10 488 aa21.43■■□□□ 1.02
NPAS3-201ENST00000346562 C4orf47A7E2U8 309 aa21.43■■□□□ 1.02
NPAS3-201ENST00000346562 BAXQ07812 192 aa21.43■■□□□ 1.02
NPAS3-201ENST00000346562 DESI1Q6ICB0 168 aa21.43■■□□□ 1.02
NPAS3-201ENST00000346562 NT5DC2Q9H857 520 aa21.43■■□□□ 1.02
NPAS3-201ENST00000346562 PRAMEF4O60810 478 aa21.42■■□□□ 1.02
NPAS3-201ENST00000346562 ESPNLQ6ZVH7 1005 aa21.42■■□□□ 1.02
NPAS3-201ENST00000346562 ZNF436Q9C0F3 470 aaPredicted RBP21.42■■□□□ 1.02
NPAS3-201ENST00000346562 THAP10Q9P2Z0 257 aaPredicted RBP21.42■■□□□ 1.02
NPAS3-201ENST00000346562 HSPB6O14558 160 aa21.42■■□□□ 1.02
NPAS3-201ENST00000346562 GSTP1P09211 210 aaKnown RBP21.42■■□□□ 1.02
NPAS3-201ENST00000346562 CDK4P11802 303 aa21.42■■□□□ 1.02
NPAS3-201ENST00000346562 NKX2-5P52952 324 aaPredicted RBP21.42■■□□□ 1.02
NPAS3-201ENST00000346562 TMEM52BQ4KMG9 183 aa21.42■■□□□ 1.02
NPAS3-201ENST00000346562 FRMPD2BQ6IN97 320 aa21.42■■□□□ 1.02
NPAS3-201ENST00000346562 FCRLAQ7L513 359 aa21.42■■□□□ 1.02
NPAS3-201ENST00000346562 TXLNGYQ9BZA5 131 aa21.42■■□□□ 1.02
NPAS3-201ENST00000346562 FAM234AQ9H0X4 552 aa21.42■■□□□ 1.02
NPAS3-201ENST00000346562 NIPAL2Q9H841 368 aa21.42■■□□□ 1.02
NPAS3-201ENST00000346562 WASH6PQ9NQA3 447 aa21.42■■□□□ 1.02
NPAS3-201ENST00000346562 NAV1Q8NEY1 1877 aa21.42■■□□□ 1.02
NPAS3-201ENST00000346562 BOLA2-SMG1P6H3BVE0 249 aa21.42■■□□□ 1.02
NPAS3-201ENST00000346562 CYB561P49447 251 aa21.42■■□□□ 1.02
NPAS3-201ENST00000346562 HBG1P69891 147 aa21.42■■□□□ 1.02
NPAS3-201ENST00000346562 HBG2P69892 147 aa21.42■■□□□ 1.02
NPAS3-201ENST00000346562 HABP2Q14520 560 aaPredicted RBP21.42■■□□□ 1.02
NPAS3-201ENST00000346562 APOOLQ6UXV4 268 aa21.42■■□□□ 1.02
NPAS3-201ENST00000346562 OR56B4Q8NH76 319 aa21.42■■□□□ 1.02
NPAS3-201ENST00000346562 NANPQ8TBE9 248 aa21.42■■□□□ 1.02
NPAS3-201ENST00000346562 SEMA4GQ9NTN9 838 aa21.42■■□□□ 1.02
NPAS3-201ENST00000346562 OR2T7P0C7T2 308 aa21.42■■□□□ 1.02
NPAS3-201ENST00000346562 SELEP16581 610 aa21.42■■□□□ 1.02
NPAS3-201ENST00000346562 TBCEQ15813 527 aaPredicted RBP21.42■■□□□ 1.02
NPAS3-201ENST00000346562 BATFQ16520 125 aa21.42■■□□□ 1.02
NPAS3-201ENST00000346562 CPEB3Q8NE35 698 aaKnown RBP21.42■■□□□ 1.02
NPAS3-201ENST00000346562 OR2T27Q8NH04 317 aa21.42■■□□□ 1.02
NPAS3-201ENST00000346562 STT3BQ8TCJ2 826 aa21.42■■□□□ 1.02
NPAS3-201ENST00000346562 TIMD4Q96H15 378 aa21.42■■□□□ 1.02
NPAS3-201ENST00000346562 NOX4Q9NPH5 578 aa21.42■■□□□ 1.02
NPAS3-201ENST00000346562 SLC35E2P0CK97 266 aa21.42■■□□□ 1.02
NPAS3-201ENST00000346562 GSK3AP49840 483 aa21.42■■□□□ 1.02
NPAS3-201ENST00000346562 ZNF813Q6ZN06 617 aa21.42■■□□□ 1.02
NPAS3-201ENST00000346562 ZBP1Q9H171 429 aa21.42■■□□□ 1.02
NPAS3-201ENST00000346562 FGF21Q9NSA1 209 aa21.42■■□□□ 1.02
NPAS3-201ENST00000346562 CORINQ9Y5Q5 1042 aa21.42■■□□□ 1.02
NPAS3-201ENST00000346562 SPINT2O43291 252 aa21.41■■□□□ 1.02
NPAS3-201ENST00000346562 PTAFRP25105 342 aa21.41■■□□□ 1.02
NPAS3-201ENST00000346562 CD27P26842 260 aa21.41■■□□□ 1.02
NPAS3-201ENST00000346562 ERVFC1P60507 584 aa21.41■■□□□ 1.02
NPAS3-201ENST00000346562 LRP5LA4QPB2 252 aa21.41■■□□□ 1.02
NPAS3-201ENST00000346562 H7C1C5 153 aa21.41■■□□□ 1.02
NPAS3-201ENST00000346562 SNAPINO95295 136 aa21.41■■□□□ 1.02
NPAS3-201ENST00000346562 OR8G3PP0DMU2 310 aa21.41■■□□□ 1.02
NPAS3-201ENST00000346562 LCN6P62502 163 aa21.41■■□□□ 1.02
NPAS3-201ENST00000346562 GABREP78334 506 aa21.41■■□□□ 1.02
NPAS3-201ENST00000346562 ATPAF1Q5TC12 328 aaPredicted RBP21.41■■□□□ 1.02
NPAS3-201ENST00000346562 NRIP3Q9NQ35 241 aa21.41■■□□□ 1.02
NPAS3-201ENST00000346562 TRBV4-1A0A0J9YWV2 114 aa21.41■■□□□ 1.02
NPAS3-201ENST00000346562 K7EPK0 472 aa21.41■■□□□ 1.02
NPAS3-201ENST00000346562 ALOX12BO75342 701 aa21.41■■□□□ 1.02
NPAS3-201ENST00000346562 MC2RQ01718 297 aa21.41■■□□□ 1.02
NPAS3-201ENST00000346562 FAM71E2Q8N5Q1 922 aa21.41■■□□□ 1.02
NPAS3-201ENST00000346562 COQ3Q9NZJ6 369 aa21.41■■□□□ 1.02
NPAS3-201ENST00000346562 TCRBV3S1A0A5B6 114 aa21.41■■□□□ 1.02
NPAS3-201ENST00000346562 BTBD17A6NE02 478 aa21.41■■□□□ 1.02
NPAS3-201ENST00000346562 PRAMEF25A6NGN4 478 aa21.41■■□□□ 1.02
NPAS3-201ENST00000346562 G3V3Y1 287 aa21.41■■□□□ 1.02
NPAS3-201ENST00000346562 GJB3O75712 270 aa21.41■■□□□ 1.02
NPAS3-201ENST00000346562 DBPQ10586 325 aaPredicted RBP21.41■■□□□ 1.02
NPAS3-201ENST00000346562 OR13C9Q8NGT0 318 aa21.41■■□□□ 1.02
NPAS3-201ENST00000346562 IMPA1P29218 277 aa21.4■■□□□ 1.02
NPAS3-201ENST00000346562 GABRA5P31644 462 aa21.4■■□□□ 1.02
NPAS3-201ENST00000346562 SLC22A25Q6T423 547 aa21.4■■□□□ 1.02
NPAS3-201ENST00000346562 ZNF687Q8N1G0 1237 aa21.4■■□□□ 1.02
NPAS3-201ENST00000346562 C3orf30Q96M34 536 aa21.4■■□□□ 1.02
NPAS3-201ENST00000346562 EGLN1Q9GZT9 426 aa21.4■■□□□ 1.02
NPAS3-201ENST00000346562 TPOP07202 933 aa21.4■■□□□ 1.02
NPAS3-201ENST00000346562 GM2AP17900 193 aa21.4■■□□□ 1.02
NPAS3-201ENST00000346562 PLA2G7Q13093 441 aa21.4■■□□□ 1.02
NPAS3-201ENST00000346562 TFAP2CQ92754 450 aa21.4■■□□□ 1.02
NPAS3-201ENST00000346562 GTF2H4Q92759 462 aa21.4■■□□□ 1.02
NPAS3-201ENST00000346562 MS4A4AQ96JQ5 239 aa21.4■■□□□ 1.02
NPAS3-201ENST00000346562 CTRCQ99895 268 aa21.4■■□□□ 1.02
NPAS3-201ENST00000346562 DUSP13Q9UII6 198 aa21.4■■□□□ 1.02
NPAS3-201ENST00000346562 A0A1B0GX78 115 aa21.4■■□□□ 1.02
NPAS3-201ENST00000346562 EPHA5P54756 1037 aa21.4■■□□□ 1.02
NPAS3-201ENST00000346562 HES1Q14469 280 aa21.4■■□□□ 1.02
NPAS3-201ENST00000346562 C6orf15Q6UXA7 325 aaPredicted RBP21.4■■□□□ 1.02
NPAS3-201ENST00000346562 RBMS3Q6XE24 437 aaKnown RBP21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms