RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 MRPS15P82914 257 aaKnown RBP14.06□□□□□ -0.16
UPF3B-202ENST00000345865 TDGQ13569 410 aa14.06□□□□□ -0.16
UPF3B-202ENST00000345865 SLC36A2Q495M3 483 aa14.06□□□□□ -0.16
UPF3B-202ENST00000345865 Q5BKY6 102 aa14.06□□□□□ -0.16
UPF3B-202ENST00000345865 NOXA1Q86UR1 476 aa14.06□□□□□ -0.16
UPF3B-202ENST00000345865 SLITRK4Q8IW52 837 aa14.06□□□□□ -0.16
UPF3B-202ENST00000345865 ZNF527Q8NB42 609 aa14.06□□□□□ -0.16
UPF3B-202ENST00000345865 LCORQ96JN0 433 aaPredicted RBP14.06□□□□□ -0.16
UPF3B-202ENST00000345865 SLC46A1Q96NT5 459 aa14.06□□□□□ -0.16
UPF3B-202ENST00000345865 GFI1Q99684 422 aa14.06□□□□□ -0.16
UPF3B-202ENST00000345865 NUDT9Q9BW91 350 aa14.06□□□□□ -0.16
UPF3B-202ENST00000345865 TTYH1Q9H313 450 aaPredicted RBP14.06□□□□□ -0.16
UPF3B-202ENST00000345865 PAQR5Q9NXK6 330 aaPredicted RBP14.06□□□□□ -0.16
UPF3B-202ENST00000345865 KLHDC2Q9Y2U9 406 aa14.06□□□□□ -0.16
UPF3B-202ENST00000345865 H7C1C5 153 aa14.06□□□□□ -0.16
UPF3B-202ENST00000345865 FLRT2O43155 660 aa14.06□□□□□ -0.16
UPF3B-202ENST00000345865 SLC43A1O75387 559 aa14.06□□□□□ -0.16
UPF3B-202ENST00000345865 SERPINA3P01011 423 aa14.06□□□□□ -0.16
UPF3B-202ENST00000345865 CD14P08571 375 aa14.06□□□□□ -0.16
UPF3B-202ENST00000345865 MYF5P13349 255 aa14.06□□□□□ -0.16
UPF3B-202ENST00000345865 ARSBP15848 533 aa14.06□□□□□ -0.16
UPF3B-202ENST00000345865 UQCRC1P31930 480 aa14.06□□□□□ -0.16
UPF3B-202ENST00000345865 CSNK1EP49674 416 aaKnown RBP14.06□□□□□ -0.16
UPF3B-202ENST00000345865 LCN6P62502 163 aa14.06□□□□□ -0.16
UPF3B-202ENST00000345865 TOMM34Q15785 309 aaPredicted RBP14.06□□□□□ -0.16
UPF3B-202ENST00000345865 PLA1AQ53H76 456 aa14.06□□□□□ -0.16
UPF3B-202ENST00000345865 ALG10Q5BKT4 473 aa14.06□□□□□ -0.16
UPF3B-202ENST00000345865 VWA2Q5GFL6 755 aa14.06□□□□□ -0.16
UPF3B-202ENST00000345865 UNQ9370/PRO34162Q6UXP9 181 aa14.06□□□□□ -0.16
UPF3B-202ENST00000345865 YIPF7Q8N8F6 280 aa14.06□□□□□ -0.16
UPF3B-202ENST00000345865 LSM14AQ8ND56 463 aaKnown RBP14.06□□□□□ -0.16
UPF3B-202ENST00000345865 C1orf216Q8TAB5 229 aa14.06□□□□□ -0.16
UPF3B-202ENST00000345865 RPS4Y2Q8TD47 263 aa14.06□□□□□ -0.16
UPF3B-202ENST00000345865 RGP1Q92546 391 aaPredicted RBP14.06□□□□□ -0.16
UPF3B-202ENST00000345865 ZDHHC12Q96GR4 267 aa14.06□□□□□ -0.16
UPF3B-202ENST00000345865 GAL3ST4Q96RP7 486 aa14.06□□□□□ -0.16
UPF3B-202ENST00000345865 GFM1Q96RP9 751 aaKnown RBP14.06□□□□□ -0.16
UPF3B-202ENST00000345865 PHF7Q9BWX1 381 aaPredicted RBP14.06□□□□□ -0.16
UPF3B-202ENST00000345865 RAB33BQ9H082 229 aa14.06□□□□□ -0.16
UPF3B-202ENST00000345865 ABCG5Q9H222 651 aa14.06□□□□□ -0.16
UPF3B-202ENST00000345865 GALNT9Q9HCQ5 603 aa14.06□□□□□ -0.16
UPF3B-202ENST00000345865 EXOSC3Q9NQT5 275 aaKnown RBP14.06□□□□□ -0.16
UPF3B-202ENST00000345865 CEP192Q8TEP8 1941 aa14.05□□□□□ -0.16
UPF3B-202ENST00000345865 FRG2CA6NGY1 282 aa14.05□□□□□ -0.16
UPF3B-202ENST00000345865 RHPN2P1A8MT19 583 aa14.05□□□□□ -0.16
UPF3B-202ENST00000345865 TNRC18O15417 2968 aaPredicted RBP14.05□□□□□ -0.16
UPF3B-202ENST00000345865 TACR3P29371 465 aa14.05□□□□□ -0.16
UPF3B-202ENST00000345865 RORAP35398 523 aa14.05□□□□□ -0.16
UPF3B-202ENST00000345865 ZNF117Q03924 483 aa14.05□□□□□ -0.16
UPF3B-202ENST00000345865 ZP2Q05996 745 aa14.05□□□□□ -0.16
UPF3B-202ENST00000345865 IL10RAQ13651 578 aa14.05□□□□□ -0.16
UPF3B-202ENST00000345865 CDK10Q15131 360 aa14.05□□□□□ -0.16
UPF3B-202ENST00000345865 CCDC58Q4VC31 144 aa14.05□□□□□ -0.16
UPF3B-202ENST00000345865 SNAP47Q5SQN1 464 aa14.05□□□□□ -0.16
UPF3B-202ENST00000345865 OR1L3Q8NH93 324 aa14.05□□□□□ -0.16
UPF3B-202ENST00000345865 HAVCR2Q8TDQ0 301 aa14.05□□□□□ -0.16
UPF3B-202ENST00000345865 TAAR8Q969N4 342 aa14.05□□□□□ -0.16
UPF3B-202ENST00000345865 DERL3Q96Q80 235 aa14.05□□□□□ -0.16
UPF3B-202ENST00000345865 FOXQ1Q9C009 403 aa14.05□□□□□ -0.16
UPF3B-202ENST00000345865 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.05□□□□□ -0.16
UPF3B-202ENST00000345865 NOX4Q9NPH5 578 aa14.05□□□□□ -0.16
UPF3B-202ENST00000345865 ARID1BQ8NFD5 2236 aaPredicted RBP14.05□□□□□ -0.16
UPF3B-202ENST00000345865 ACOD1A6NK06 481 aa14.04□□□□□ -0.16
UPF3B-202ENST00000345865 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.04□□□□□ -0.16
UPF3B-202ENST00000345865 INMT-MINDY4F8WBC2 141 aa14.04□□□□□ -0.16
UPF3B-202ENST00000345865 CPNE3O75131 537 aaKnown RBP14.04□□□□□ -0.16
UPF3B-202ENST00000345865 ARL6IP5O75915 188 aa14.04□□□□□ -0.16
UPF3B-202ENST00000345865 ZFPL1O95159 310 aa14.04□□□□□ -0.16
UPF3B-202ENST00000345865 IGF2P01344 180 aa14.04□□□□□ -0.16
UPF3B-202ENST00000345865 ADRB1P08588 477 aa14.04□□□□□ -0.16
UPF3B-202ENST00000345865 NXPH1P58417 271 aa14.04□□□□□ -0.16
UPF3B-202ENST00000345865 HNRNPKP61978 463 aaKnown RBP eCLIP14.04□□□□□ -0.16
UPF3B-202ENST00000345865 RPL6Q02878 288 aaKnown RBP14.04□□□□□ -0.16
UPF3B-202ENST00000345865 RPL18Q07020 188 aaKnown RBP14.04□□□□□ -0.16
UPF3B-202ENST00000345865 UBXN2BQ14CS0 331 aa14.04□□□□□ -0.16
UPF3B-202ENST00000345865 RNASE12Q5GAN4 147 aaKnown RBP14.04□□□□□ -0.16
UPF3B-202ENST00000345865 C1QL3Q5VWW1 255 aa14.04□□□□□ -0.16
UPF3B-202ENST00000345865 PYHIN1Q6K0P9 492 aa14.04□□□□□ -0.16
UPF3B-202ENST00000345865 PRR23CQ6ZRP0 262 aa14.04□□□□□ -0.16
UPF3B-202ENST00000345865 C9orf40Q8IXQ3 194 aa14.04□□□□□ -0.16
UPF3B-202ENST00000345865 PRSS58Q8IYP2 241 aa14.04□□□□□ -0.16
UPF3B-202ENST00000345865 YIPF5Q969M3 257 aa14.04□□□□□ -0.16
UPF3B-202ENST00000345865 SRA1Q9HD15 236 aaKnown RBP14.04□□□□□ -0.16
UPF3B-202ENST00000345865 BRD7Q9NPI1 651 aa14.04□□□□□ -0.16
UPF3B-202ENST00000345865 MMACHCQ9Y4U1 282 aa14.04□□□□□ -0.16
UPF3B-202ENST00000345865 TMEM72A0PK05 275 aa14.04□□□□□ -0.16
UPF3B-202ENST00000345865 FAM172BPA6NC97 362 aa14.04□□□□□ -0.16
UPF3B-202ENST00000345865 GATBO75879 557 aaKnown RBP14.04□□□□□ -0.16
UPF3B-202ENST00000345865 CD1AP06126 327 aa14.04□□□□□ -0.16
UPF3B-202ENST00000345865 CD3GP09693 182 aa14.04□□□□□ -0.16
UPF3B-202ENST00000345865 FOLR1P15328 257 aa14.04□□□□□ -0.16
UPF3B-202ENST00000345865 SDHAP31040 664 aa14.04□□□□□ -0.16
UPF3B-202ENST00000345865 FOXL2P58012 376 aa14.04□□□□□ -0.16
UPF3B-202ENST00000345865 DGCR2P98153 550 aa14.04□□□□□ -0.16
UPF3B-202ENST00000345865 BIKQ13323 160 aa14.04□□□□□ -0.16
UPF3B-202ENST00000345865 MESTQ5EB52 335 aa14.04□□□□□ -0.16
UPF3B-202ENST00000345865 KRT74Q7RTS7 529 aa14.04□□□□□ -0.16
UPF3B-202ENST00000345865 CCNL2Q96S94 520 aaPredicted RBP14.04□□□□□ -0.16
UPF3B-202ENST00000345865 ELF4Q99607 663 aaPredicted RBP14.04□□□□□ -0.16
UPF3B-202ENST00000345865 ADAM19Q9H013 955 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms