RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 PLD2O14939 933 aa8.39□□□□□ -1.07
ATG4A-202ENST00000345734 FADS1O60427 444 aa8.39□□□□□ -1.07
ATG4A-202ENST00000345734 NADKO95544 446 aaPredicted RBP8.39□□□□□ -1.07
ATG4A-202ENST00000345734 INHBBP09529 407 aa8.39□□□□□ -1.07
ATG4A-202ENST00000345734 FAM87AP0C7U9 286 aa8.39□□□□□ -1.07
ATG4A-202ENST00000345734 LIMS3P0CW19 117 aa8.39□□□□□ -1.07
ATG4A-202ENST00000345734 LIMS4P0CW20 117 aa8.39□□□□□ -1.07
ATG4A-202ENST00000345734 CLUP10909 449 aa8.39□□□□□ -1.07
ATG4A-202ENST00000345734 MYL12AP19105 171 aa8.39□□□□□ -1.07
ATG4A-202ENST00000345734 LCN1P31025 176 aa8.39□□□□□ -1.07
ATG4A-202ENST00000345734 EVI2BP34910 448 aa8.39□□□□□ -1.07
ATG4A-202ENST00000345734 ECI1P42126 302 aa8.39□□□□□ -1.07
ATG4A-202ENST00000345734 LIMK1P53667 647 aa8.39□□□□□ -1.07
ATG4A-202ENST00000345734 FBXW4P57775 412 aa8.39□□□□□ -1.07
ATG4A-202ENST00000345734 GNG2P59768 71 aa8.39□□□□□ -1.07
ATG4A-202ENST00000345734 TRA2AQ13595 282 aaKnown RBP eCLIP8.39□□□□□ -1.07
ATG4A-202ENST00000345734 ANKRD39Q53RE8 183 aa8.39□□□□□ -1.07
ATG4A-202ENST00000345734 C19orf48Q6RUI8 117 aa8.39□□□□□ -1.07
ATG4A-202ENST00000345734 LHFPL3Q86UP9 236 aa8.39□□□□□ -1.07
ATG4A-202ENST00000345734 SIRT6Q8N6T7 355 aa8.39□□□□□ -1.07
ATG4A-202ENST00000345734 C17orf47Q8NEP4 570 aa8.39□□□□□ -1.07
ATG4A-202ENST00000345734 CHAC2Q8WUX2 184 aa8.39□□□□□ -1.07
ATG4A-202ENST00000345734 PTP4A1Q93096 173 aa8.39□□□□□ -1.07
ATG4A-202ENST00000345734 ZHX1-C8orf76Q96EF9 292 aa8.39□□□□□ -1.07
ATG4A-202ENST00000345734 DCSTAMPQ9H295 470 aa8.39□□□□□ -1.07
ATG4A-202ENST00000345734 SLC26A1Q9H2B4 701 aa8.39□□□□□ -1.07
ATG4A-202ENST00000345734 CMC2Q9NRP2 79 aa8.39□□□□□ -1.07
ATG4A-202ENST00000345734 H2AFY2Q9P0M6 372 aaPredicted RBP8.39□□□□□ -1.07
ATG4A-202ENST00000345734 FBXL4Q9UKA2 621 aa8.39□□□□□ -1.07
ATG4A-202ENST00000345734 R4GN57 208 aa8.39□□□□□ -1.07
ATG4A-202ENST00000345734 KNTC1P50748 2209 aa8.38□□□□□ -1.07
ATG4A-202ENST00000345734 A0A1W2PQD3 144 aa8.38□□□□□ -1.07
ATG4A-202ENST00000345734 IRGMA1A4Y4 181 aa8.38□□□□□ -1.07
ATG4A-202ENST00000345734 MCIDASD6RGH6 385 aa8.38□□□□□ -1.07
ATG4A-202ENST00000345734 ADAM10O14672 748 aa8.38□□□□□ -1.07
ATG4A-202ENST00000345734 GPX5O75715 221 aa8.38□□□□□ -1.07
ATG4A-202ENST00000345734 OR7A10O76100 309 aa8.38□□□□□ -1.07
ATG4A-202ENST00000345734 PNMTP11086 282 aa8.38□□□□□ -1.07
ATG4A-202ENST00000345734 ACP1P24666 158 aa8.38□□□□□ -1.07
ATG4A-202ENST00000345734 ITPKBP27987 946 aa8.38□□□□□ -1.07
ATG4A-202ENST00000345734 TACR3P29371 465 aa8.38□□□□□ -1.07
ATG4A-202ENST00000345734 SLC6A6P31641 620 aa8.38□□□□□ -1.07
ATG4A-202ENST00000345734 SLC1A3P43003 542 aa8.38□□□□□ -1.07
ATG4A-202ENST00000345734 MC2RQ01718 297 aa8.38□□□□□ -1.07
ATG4A-202ENST00000345734 EGR4Q05215 589 aa8.38□□□□□ -1.07
ATG4A-202ENST00000345734 ITGADQ13349 1161 aa8.38□□□□□ -1.07
ATG4A-202ENST00000345734 CRMP1Q14194 572 aa8.38□□□□□ -1.07
ATG4A-202ENST00000345734 KLHL12Q53G59 568 aa8.38□□□□□ -1.07
ATG4A-202ENST00000345734 CCDC157Q569K6 752 aa8.38□□□□□ -1.07
ATG4A-202ENST00000345734 LIPKQ5VXJ0 399 aa8.38□□□□□ -1.07
ATG4A-202ENST00000345734 POMZP3Q6PJE2 187 aa8.38□□□□□ -1.07
ATG4A-202ENST00000345734 TMEM205Q6UW68 189 aa8.38□□□□□ -1.07
ATG4A-202ENST00000345734 SEZ6L2Q6UXD5 910 aa8.38□□□□□ -1.07
ATG4A-202ENST00000345734 DBX2Q6ZNG2 339 aa8.38□□□□□ -1.07
ATG4A-202ENST00000345734 Q6ZS46 218 aa8.38□□□□□ -1.07
ATG4A-202ENST00000345734 MEPCEQ7L2J0 689 aaKnown RBP8.38□□□□□ -1.07
ATG4A-202ENST00000345734 SLC38A6Q8IZM9 456 aa8.38□□□□□ -1.07
ATG4A-202ENST00000345734 SLC37A3Q8NCC5 494 aa8.38□□□□□ -1.07
ATG4A-202ENST00000345734 OR51G2Q8NGK0 314 aa8.38□□□□□ -1.07
ATG4A-202ENST00000345734 TP53INP1Q96A56 240 aa8.38□□□□□ -1.07
ATG4A-202ENST00000345734 DNAJA3Q96EY1 480 aa8.38□□□□□ -1.07
ATG4A-202ENST00000345734 Q96M66 194 aa8.38□□□□□ -1.07
ATG4A-202ENST00000345734 MOGAT1Q96PD6 335 aa8.38□□□□□ -1.07
ATG4A-202ENST00000345734 ERMAPQ96PL5 475 aaPredicted RBP8.38□□□□□ -1.07
ATG4A-202ENST00000345734 LPAR4Q99677 370 aa8.38□□□□□ -1.07
ATG4A-202ENST00000345734 ZNF649Q9BS31 505 aa8.38□□□□□ -1.07
ATG4A-202ENST00000345734 OR51V1Q9H2C8 321 aa8.38□□□□□ -1.07
ATG4A-202ENST00000345734 OSGIN1Q9UJX0 560 aa8.38□□□□□ -1.07
ATG4A-202ENST00000345734 PPIEQ9UNP9 301 aaKnown RBP8.38□□□□□ -1.07
ATG4A-202ENST00000345734 EXOGQ9Y2C4 368 aaKnown RBP8.38□□□□□ -1.07
ATG4A-202ENST00000345734 ADAM18Q9Y3Q7 739 aa8.38□□□□□ -1.07
ATG4A-202ENST00000345734 NPFFR2Q9Y5X5 522 aa8.38□□□□□ -1.07
ATG4A-202ENST00000345734 PNMA8CA0A1B0GUJ8 204 aa8.38□□□□□ -1.07
ATG4A-202ENST00000345734 FAM172BPA6NC97 362 aa8.38□□□□□ -1.07
ATG4A-202ENST00000345734 CCDC182A6NF36 153 aa8.38□□□□□ -1.07
ATG4A-202ENST00000345734 OR6C70A6NIJ9 312 aa8.38□□□□□ -1.07
ATG4A-202ENST00000345734 RIIAD1A6NNX1 92 aa8.38□□□□□ -1.07
ATG4A-202ENST00000345734 PRR23D1E9PI22 279 aaPredicted RBP8.38□□□□□ -1.07
ATG4A-202ENST00000345734 LRRTM2O43300 516 aa8.38□□□□□ -1.07
ATG4A-202ENST00000345734 NDUFB2O95178 105 aa8.38□□□□□ -1.07
ATG4A-202ENST00000345734 NUDT14O95848 222 aa8.38□□□□□ -1.07
ATG4A-202ENST00000345734 GYPBP06028 91 aa8.38□□□□□ -1.07
ATG4A-202ENST00000345734 ZNF883P0CG24 379 aa8.38□□□□□ -1.07
ATG4A-202ENST00000345734 PRR23D2P0DMB1 279 aaPredicted RBP8.38□□□□□ -1.07
ATG4A-202ENST00000345734 HK1P19367 917 aa8.38□□□□□ -1.07
ATG4A-202ENST00000345734 BLVRAP53004 296 aa8.38□□□□□ -1.07
ATG4A-202ENST00000345734 WNT4P56705 351 aa8.38□□□□□ -1.07
ATG4A-202ENST00000345734 NRG3P56975 720 aa8.38□□□□□ -1.07
ATG4A-202ENST00000345734 SLC26A5P58743 744 aa8.38□□□□□ -1.07
ATG4A-202ENST00000345734 SUMO1P63165 101 aaKnown RBP8.38□□□□□ -1.07
ATG4A-202ENST00000345734 LTBQ06643 244 aa8.38□□□□□ -1.07
ATG4A-202ENST00000345734 MLLT11Q13015 90 aaPredicted RBP8.38□□□□□ -1.07
ATG4A-202ENST00000345734 DGUOKQ16854 277 aa8.38□□□□□ -1.07
ATG4A-202ENST00000345734 TMEM44Q2T9K0 475 aa8.38□□□□□ -1.07
ATG4A-202ENST00000345734 OR5M10Q6IEU7 315 aa8.38□□□□□ -1.07
ATG4A-202ENST00000345734 FAM122CQ6P4D5 195 aa8.38□□□□□ -1.07
ATG4A-202ENST00000345734 FAM198BQ6UWH4 519 aa8.38□□□□□ -1.07
ATG4A-202ENST00000345734 IDO2Q6ZQW0 420 aa8.38□□□□□ -1.07
ATG4A-202ENST00000345734 GID4Q8IVV7 300 aa8.38□□□□□ -1.07
ATG4A-202ENST00000345734 C10orf53Q8N6V4 93 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms