RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 Q8N9G6 341 aaPredicted RBP18.07■□□□□ 0.48
HDAC4-201ENST00000345617 OR5M8Q8NGP6 311 aa18.07■□□□□ 0.48
HDAC4-201ENST00000345617 FBXO27Q8NI29 283 aa18.07■□□□□ 0.48
HDAC4-201ENST00000345617 LRFN5Q96NI6 719 aa18.07■□□□□ 0.48
HDAC4-201ENST00000345617 FER1L5A0AVI2 2057 aa18.07■□□□□ 0.48
HDAC4-201ENST00000345617 OR5H15A6NDH6 313 aa18.07■□□□□ 0.48
HDAC4-201ENST00000345617 OR5H14A6NHG9 310 aa18.07■□□□□ 0.48
HDAC4-201ENST00000345617 OR5H1A6NKK0 313 aa18.07■□□□□ 0.48
HDAC4-201ENST00000345617 NXNL2Q5VZ03 156 aa18.07■□□□□ 0.48
HDAC4-201ENST00000345617 IL1F10Q8WWZ1 152 aa18.07■□□□□ 0.48
HDAC4-201ENST00000345617 ACPTQ9BZG2 426 aa18.07■□□□□ 0.48
HDAC4-201ENST00000345617 ENKD1Q9H0I2 346 aa18.07■□□□□ 0.48
HDAC4-201ENST00000345617 DDX31Q9H8H2 851 aaKnown RBP18.07■□□□□ 0.48
HDAC4-201ENST00000345617 ANKRD34BA5PLL1 514 aa18.07■□□□□ 0.48
HDAC4-201ENST00000345617 SERPINA2P20848 420 aa18.07■□□□□ 0.48
HDAC4-201ENST00000345617 SNU13P55769 128 aaKnown RBP18.07■□□□□ 0.48
HDAC4-201ENST00000345617 CLDN10P78369 228 aa18.07■□□□□ 0.48
HDAC4-201ENST00000345617 AADACL3Q5VUY0 350 aa18.07■□□□□ 0.48
HDAC4-201ENST00000345617 OR4N2Q8NGD1 307 aa18.07■□□□□ 0.48
HDAC4-201ENST00000345617 USB1Q9BQ65 265 aaKnown RBP18.07■□□□□ 0.48
HDAC4-201ENST00000345617 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP18.07■□□□□ 0.48
HDAC4-201ENST00000345617 TMEM269A0A1B0GVZ9 245 aa18.07■□□□□ 0.48
HDAC4-201ENST00000345617 PAX6P26367 422 aa18.07■□□□□ 0.48
HDAC4-201ENST00000345617 IL3RAP26951 378 aa18.07■□□□□ 0.48
HDAC4-201ENST00000345617 HTR1FP30939 366 aa18.07■□□□□ 0.48
HDAC4-201ENST00000345617 SFTPDP35247 375 aa18.07■□□□□ 0.48
HDAC4-201ENST00000345617 TEKQ02763 1124 aa18.07■□□□□ 0.48
HDAC4-201ENST00000345617 KIRREL1Q96J84 757 aa18.07■□□□□ 0.48
HDAC4-201ENST00000345617 PLEK2Q9NYT0 353 aa18.07■□□□□ 0.48
HDAC4-201ENST00000345617 MN1Q10571 1320 aaPredicted RBP18.07■□□□□ 0.48
HDAC4-201ENST00000345617 TMEM235A6NFC5 223 aa18.07■□□□□ 0.48
HDAC4-201ENST00000345617 ILKQ13418 452 aa18.07■□□□□ 0.48
HDAC4-201ENST00000345617 GAB1Q13480 694 aa18.07■□□□□ 0.48
HDAC4-201ENST00000345617 OR51L1Q8NGJ5 315 aa18.07■□□□□ 0.48
HDAC4-201ENST00000345617 METTL9Q9H1A3 318 aa18.07■□□□□ 0.48
HDAC4-201ENST00000345617 T-ENOLP0DO92 83 aa18.07■□□□□ 0.48
HDAC4-201ENST00000345617 SIRPAP78324 504 aa18.07■□□□□ 0.48
HDAC4-201ENST00000345617 SHC2P98077 582 aa18.07■□□□□ 0.48
HDAC4-201ENST00000345617 TSPAN31Q12999 210 aa18.07■□□□□ 0.48
HDAC4-201ENST00000345617 OR52W1Q6IF63 320 aa18.07■□□□□ 0.48
HDAC4-201ENST00000345617 ZNF620Q6ZNG0 422 aa18.07■□□□□ 0.48
HDAC4-201ENST00000345617 DCLRE1CQ96SD1 692 aaKnown RBP18.07■□□□□ 0.48
HDAC4-201ENST00000345617 C12orf57Q99622 126 aa18.07■□□□□ 0.48
HDAC4-201ENST00000345617 RAB22AQ9UL26 194 aa18.07■□□□□ 0.48
HDAC4-201ENST00000345617 UMAD1C9J7I0 102 aa18.07■□□□□ 0.48
HDAC4-201ENST00000345617 CDC20Q12834 499 aa18.07■□□□□ 0.48
HDAC4-201ENST00000345617 PRR18Q8N4B5 295 aa18.07■□□□□ 0.48
HDAC4-201ENST00000345617 DOT1LQ8TEK3 1739 aa18.07■□□□□ 0.48
HDAC4-201ENST00000345617 CBLL1Q75N03 491 aa18.06■□□□□ 0.48
HDAC4-201ENST00000345617 A0A1B0GVG6 124 aa18.06■□□□□ 0.48
HDAC4-201ENST00000345617 SULT2B1O00204 365 aa18.06■□□□□ 0.48
HDAC4-201ENST00000345617 COCHO43405 550 aa18.06■□□□□ 0.48
HDAC4-201ENST00000345617 SLC2A1P11166 492 aa18.06■□□□□ 0.48
HDAC4-201ENST00000345617 ZNF684Q5T5D7 378 aa18.06■□□□□ 0.48
HDAC4-201ENST00000345617 KIAA0141Q14154 515 aaPredicted RBP18.06■□□□□ 0.48
HDAC4-201ENST00000345617 LRRC26Q2I0M4 334 aa18.06■□□□□ 0.48
HDAC4-201ENST00000345617 PXDC1Q5TGL8 231 aa18.06■□□□□ 0.48
HDAC4-201ENST00000345617 LYSMD2Q8IV50 215 aa18.06■□□□□ 0.48
HDAC4-201ENST00000345617 RBMXL3Q8N7X1 1067 aaKnown RBP18.06■□□□□ 0.48
HDAC4-201ENST00000345617 PSORS1C1Q9UIG5 152 aa18.06■□□□□ 0.48
HDAC4-201ENST00000345617 NPFFR2Q9Y5X5 522 aa18.06■□□□□ 0.48
HDAC4-201ENST00000345617 TMEM72A0PK05 275 aa18.06■□□□□ 0.48
HDAC4-201ENST00000345617 BAXQ07812 192 aa18.06■□□□□ 0.48
HDAC4-201ENST00000345617 ATP1B1P05026 303 aa18.06■□□□□ 0.48
HDAC4-201ENST00000345617 DHPSP49366 369 aaPredicted RBP18.06■□□□□ 0.48
HDAC4-201ENST00000345617 ZNF561Q8N587 486 aa18.06■□□□□ 0.48
HDAC4-201ENST00000345617 OLAHQ9NV23 265 aa18.06■□□□□ 0.48
HDAC4-201ENST00000345617 COL1A1P02452 1464 aaPredicted RBP18.06■□□□□ 0.48
HDAC4-201ENST00000345617 KDM4FA0A1W2PPD8 638 aa18.06■□□□□ 0.48
HDAC4-201ENST00000345617 RAF1P04049 648 aa18.06■□□□□ 0.48
HDAC4-201ENST00000345617 CSF2RAP15509 400 aa18.06■□□□□ 0.48
HDAC4-201ENST00000345617 SRMP19623 302 aa18.06■□□□□ 0.48
HDAC4-201ENST00000345617 KCNK13Q9HB14 408 aa18.06■□□□□ 0.48
HDAC4-201ENST00000345617 SNED1Q8TER0 1413 aa18.06■□□□□ 0.48
HDAC4-201ENST00000345617 RPS15P62841 145 aaKnown RBP18.05■□□□□ 0.48
HDAC4-201ENST00000345617 LMO3Q8TAP4 145 aa18.05■□□□□ 0.48
HDAC4-201ENST00000345617 CD200R1Q8TD46 325 aa18.05■□□□□ 0.48
HDAC4-201ENST00000345617 GKN1Q9NS71 199 aa18.05■□□□□ 0.48
HDAC4-201ENST00000345617 WRAP73Q9P2S5 460 aaPredicted RBP18.05■□□□□ 0.48
HDAC4-201ENST00000345617 MCRIP1C9JLW8 97 aa18.05■□□□□ 0.48
HDAC4-201ENST00000345617 HNRNPA1P09651 372 aaKnown RBP eCLIP18.05■□□□□ 0.48
HDAC4-201ENST00000345617 TACR1P25103 407 aa18.05■□□□□ 0.48
HDAC4-201ENST00000345617 SLC9A3R2Q15599 337 aa18.05■□□□□ 0.48
HDAC4-201ENST00000345617 GDF6Q6KF10 455 aaPredicted RBP18.05■□□□□ 0.48
HDAC4-201ENST00000345617 SPRED1Q7Z699 444 aa18.05■□□□□ 0.48
HDAC4-201ENST00000345617 CRLF2Q9HC73 371 aa18.05■□□□□ 0.48
HDAC4-201ENST00000345617 MEIS3P2A8K0S8 358 aa18.05■□□□□ 0.48
HDAC4-201ENST00000345617 ZNF91Q05481 1191 aa18.05■□□□□ 0.48
HDAC4-201ENST00000345617 BAMBIQ13145 260 aa18.05■□□□□ 0.48
HDAC4-201ENST00000345617 WDR76Q9H967 626 aa18.05■□□□□ 0.48
HDAC4-201ENST00000345617 INTS1Q8N201 2190 aaKnown RBP18.05■□□□□ 0.48
HDAC4-201ENST00000345617 ZNF239Q16600 458 aaKnown RBP18.05■□□□□ 0.48
HDAC4-201ENST00000345617 ACOT7LQ6ZUV0 252 aa18.05■□□□□ 0.48
HDAC4-201ENST00000345617 MISPQ8IVT2 679 aa18.05■□□□□ 0.48
HDAC4-201ENST00000345617 ACVR1CQ8NER5 493 aa18.05■□□□□ 0.48
HDAC4-201ENST00000345617 OR1M1Q8NGA1 313 aa18.05■□□□□ 0.48
HDAC4-201ENST00000345617 ISG20Q96AZ6 181 aaKnown RBP18.05■□□□□ 0.48
HDAC4-201ENST00000345617 C18orf63Q68DL7 685 aa18.05■□□□□ 0.48
HDAC4-201ENST00000345617 FJX1Q86VR8 437 aa18.05■□□□□ 0.48
HDAC4-201ENST00000345617 KCNJ15Q99712 375 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms