RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 TLNRD1Q9H1K6 362 aa13.64□□□□□ -0.23
CLCN1-201ENST00000343257 NCDNQ9UBB6 729 aa13.64□□□□□ -0.23
CLCN1-201ENST00000343257 IL36AQ9UHA7 158 aa13.64□□□□□ -0.23
CLCN1-201ENST00000343257 ZNF223Q9UK11 482 aaPredicted RBP13.64□□□□□ -0.23
CLCN1-201ENST00000343257 COL4A3Q01955 1670 aa13.64□□□□□ -0.23
CLCN1-201ENST00000343257 ZNF705EA8MWA4 302 aaPredicted RBP13.64□□□□□ -0.23
CLCN1-201ENST00000343257 OGG1O15527 345 aa13.64□□□□□ -0.23
CLCN1-201ENST00000343257 LATS1O95835 1130 aa13.64□□□□□ -0.23
CLCN1-201ENST00000343257 TYRP1P17643 537 aa13.64□□□□□ -0.23
CLCN1-201ENST00000343257 AKR1C3P42330 323 aa13.64□□□□□ -0.23
CLCN1-201ENST00000343257 FLT3LGP49771 235 aa13.64□□□□□ -0.23
CLCN1-201ENST00000343257 RBM39Q14498 530 aaKnown RBP13.64□□□□□ -0.23
CLCN1-201ENST00000343257 SMAD2Q15796 467 aaKnown RBP13.64□□□□□ -0.23
CLCN1-201ENST00000343257 DUSP5Q16690 384 aa13.64□□□□□ -0.23
CLCN1-201ENST00000343257 CCDC157Q569K6 752 aa13.64□□□□□ -0.23
CLCN1-201ENST00000343257 NUDT18Q6ZVK8 323 aa13.64□□□□□ -0.23
CLCN1-201ENST00000343257 RANBP3LQ86VV4 465 aaPredicted RBP13.64□□□□□ -0.23
CLCN1-201ENST00000343257 RXFP4Q8TDU9 374 aa13.64□□□□□ -0.23
CLCN1-201ENST00000343257 C10orf90Q96M02 699 aa13.64□□□□□ -0.23
CLCN1-201ENST00000343257 NIT2Q9NQR4 276 aa13.64□□□□□ -0.23
CLCN1-201ENST00000343257 DHCR7Q9UBM7 475 aaKnown RBP13.64□□□□□ -0.23
CLCN1-201ENST00000343257 DENND4AQ7Z401 1863 aa13.63□□□□□ -0.23
CLCN1-201ENST00000343257 RFPL4AA6NLU0 287 aa13.63□□□□□ -0.23
CLCN1-201ENST00000343257 RFPL4AL1F8VTS6 287 aa13.63□□□□□ -0.23
CLCN1-201ENST00000343257 OR2T1O43869 369 aa13.63□□□□□ -0.23
CLCN1-201ENST00000343257 NDUFS6O75380 124 aaKnown RBP13.63□□□□□ -0.23
CLCN1-201ENST00000343257 UBBP0CG47 229 aa13.63□□□□□ -0.23
CLCN1-201ENST00000343257 UBCP0CG48 685 aaKnown RBP13.63□□□□□ -0.23
CLCN1-201ENST00000343257 OR8G3PP0DMU2 310 aa13.63□□□□□ -0.23
CLCN1-201ENST00000343257 BCL6P41182 706 aa13.63□□□□□ -0.23
CLCN1-201ENST00000343257 PPIAP62937 165 aaKnown RBP13.63□□□□□ -0.23
CLCN1-201ENST00000343257 RPS27AP62979 156 aaKnown RBP13.63□□□□□ -0.23
CLCN1-201ENST00000343257 UBA52P62987 128 aaKnown RBP13.63□□□□□ -0.23
CLCN1-201ENST00000343257 SNRPNP63162 240 aaKnown RBP13.63□□□□□ -0.23
CLCN1-201ENST00000343257 REEP5Q00765 189 aa13.63□□□□□ -0.23
CLCN1-201ENST00000343257 LTBQ06643 244 aa13.63□□□□□ -0.23
CLCN1-201ENST00000343257 IL10RAQ13651 578 aa13.63□□□□□ -0.23
CLCN1-201ENST00000343257 HTR3DQ70Z44 454 aa13.63□□□□□ -0.23
CLCN1-201ENST00000343257 NPAS4Q8IUM7 802 aa13.63□□□□□ -0.23
CLCN1-201ENST00000343257 DCUN1D3Q8IWE4 304 aa13.63□□□□□ -0.23
CLCN1-201ENST00000343257 SVBPQ8N300 66 aa13.63□□□□□ -0.23
CLCN1-201ENST00000343257 LINC01555Q8NAE3 123 aa13.63□□□□□ -0.23
CLCN1-201ENST00000343257 OR51D1Q8NGF3 324 aa13.63□□□□□ -0.23
CLCN1-201ENST00000343257 RGP1Q92546 391 aaPredicted RBP13.63□□□□□ -0.23
CLCN1-201ENST00000343257 HAVCR1Q96D42 359 aa13.63□□□□□ -0.23
CLCN1-201ENST00000343257 Q96M85 177 aa13.63□□□□□ -0.23
CLCN1-201ENST00000343257 NMNAT3Q96T66 252 aa13.63□□□□□ -0.23
CLCN1-201ENST00000343257 CNN2Q99439 309 aaKnown RBP13.63□□□□□ -0.23
CLCN1-201ENST00000343257 ACTRT3Q9BYD9 372 aa13.63□□□□□ -0.23
CLCN1-201ENST00000343257 OR52A5Q9H2C5 316 aa13.63□□□□□ -0.23
CLCN1-201ENST00000343257 MRPS30Q9NP92 439 aaKnown RBP13.63□□□□□ -0.23
CLCN1-201ENST00000343257 FARSAQ9Y285 508 aaKnown RBP13.63□□□□□ -0.23
CLCN1-201ENST00000343257 MED31Q9Y3C7 131 aa13.63□□□□□ -0.23
CLCN1-201ENST00000343257 ABLIM3O94929 683 aa13.63□□□□□ -0.23
CLCN1-201ENST00000343257 APEHP13798 732 aaKnown RBP13.63□□□□□ -0.23
CLCN1-201ENST00000343257 MGMTP16455 207 aa13.63□□□□□ -0.23
CLCN1-201ENST00000343257 ADRA2CP18825 462 aa13.63□□□□□ -0.23
CLCN1-201ENST00000343257 SLC2A5P22732 501 aa13.63□□□□□ -0.23
CLCN1-201ENST00000343257 RPL4P36578 427 aaKnown RBP13.63□□□□□ -0.23
CLCN1-201ENST00000343257 PDZK1IP1Q13113 114 aa13.63□□□□□ -0.23
CLCN1-201ENST00000343257 SCGB2B2Q4G0G5 96 aa13.63□□□□□ -0.23
CLCN1-201ENST00000343257 ZNF658BQ4V348 819 aaPredicted RBP13.63□□□□□ -0.23
CLCN1-201ENST00000343257 ADIPOR2Q86V24 386 aa13.63□□□□□ -0.23
CLCN1-201ENST00000343257 FAM219AQ8IW50 185 aa13.63□□□□□ -0.23
CLCN1-201ENST00000343257 ABT1Q9ULW3 272 aaKnown RBP13.63□□□□□ -0.23
CLCN1-201ENST00000343257 FAM96BQ9Y3D0 163 aa13.63□□□□□ -0.23
CLCN1-201ENST00000343257 ZNF780BQ9Y6R6 833 aa13.63□□□□□ -0.23
CLCN1-201ENST00000343257 ANAPC1Q9H1A4 1944 aa13.63□□□□□ -0.23
CLCN1-201ENST00000343257 PRR32B1ATL7 298 aa13.63□□□□□ -0.23
CLCN1-201ENST00000343257 ADAM11O75078 769 aa13.63□□□□□ -0.23
CLCN1-201ENST00000343257 ITGA10O75578 1167 aa13.63□□□□□ -0.23
CLCN1-201ENST00000343257 RPA2P15927 270 aa13.63□□□□□ -0.23
CLCN1-201ENST00000343257 HIST1H1TP22492 207 aaPredicted RBP13.63□□□□□ -0.23
CLCN1-201ENST00000343257 CSF2RBP32927 897 aa13.63□□□□□ -0.23
CLCN1-201ENST00000343257 DLSTP36957 453 aa13.63□□□□□ -0.23
CLCN1-201ENST00000343257 RFC3P40938 356 aa13.63□□□□□ -0.23
CLCN1-201ENST00000343257 TEAD2Q15562 447 aa13.63□□□□□ -0.23
CLCN1-201ENST00000343257 PLEKHN1Q494U1 663 aaPredicted RBP13.63□□□□□ -0.23
CLCN1-201ENST00000343257 RPL22L1Q6P5R6 122 aaKnown RBP13.63□□□□□ -0.23
CLCN1-201ENST00000343257 DPPA4Q7L190 304 aa13.63□□□□□ -0.23
CLCN1-201ENST00000343257 ZNF511Q8NB15 262 aa13.63□□□□□ -0.23
CLCN1-201ENST00000343257 TRMT2BQ96GJ1 504 aaKnown RBP13.63□□□□□ -0.23
CLCN1-201ENST00000343257 LMLNQ96KR4 655 aa13.63□□□□□ -0.23
CLCN1-201ENST00000343257 TSSK2Q96PF2 358 aa13.63□□□□□ -0.23
CLCN1-201ENST00000343257 SLC46A2Q9BY10 475 aa13.63□□□□□ -0.23
CLCN1-201ENST00000343257 ZNF275Q9NSD4 429 aaPredicted RBP13.63□□□□□ -0.23
CLCN1-201ENST00000343257 SAGE1Q9NXZ1 904 aa13.63□□□□□ -0.23
CLCN1-201ENST00000343257 IGKV1-8A0A0C4DH67 115 aa13.62□□□□□ -0.23
CLCN1-201ENST00000343257 OR14I1A6ND48 311 aa13.62□□□□□ -0.23
CLCN1-201ENST00000343257 OR5H14A6NHG9 310 aa13.62□□□□□ -0.23
CLCN1-201ENST00000343257 OR2AT4A6NND4 320 aa13.62□□□□□ -0.23
CLCN1-201ENST00000343257 PTGFRP43088 359 aa13.62□□□□□ -0.23
CLCN1-201ENST00000343257 ST8SIA6P61647 398 aa13.62□□□□□ -0.23
CLCN1-201ENST00000343257 ACTC1P68032 377 aa13.62□□□□□ -0.23
CLCN1-201ENST00000343257 ACTA1P68133 377 aa13.62□□□□□ -0.23
CLCN1-201ENST00000343257 BTN3A2P78410 334 aa13.62□□□□□ -0.23
CLCN1-201ENST00000343257 STAC2Q6ZMT1 411 aa13.62□□□□□ -0.23
CLCN1-201ENST00000343257 MOB3CQ70IA8 216 aa13.62□□□□□ -0.23
CLCN1-201ENST00000343257 SPAG16Q8N0X2 631 aa13.62□□□□□ -0.23
CLCN1-201ENST00000343257 OR1M1Q8NGA1 313 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms