RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 MAP2K6P52564 334 aa7.47□□□□□ -1.21
UBE4B-202ENST00000343090 FOXK2Q01167 660 aa7.47□□□□□ -1.21
UBE4B-202ENST00000343090 MRPL58Q14197 206 aaKnown RBP7.47□□□□□ -1.21
UBE4B-202ENST00000343090 NKG7Q16617 165 aa7.47□□□□□ -1.21
UBE4B-202ENST00000343090 WBP2NLQ6ICG8 309 aa7.47□□□□□ -1.21
UBE4B-202ENST00000343090 ADAMTSL4Q6UY14 1074 aa7.47□□□□□ -1.21
UBE4B-202ENST00000343090 PGAP1Q75T13 922 aa7.47□□□□□ -1.21
UBE4B-202ENST00000343090 ARL14Q8N4G2 192 aa7.47□□□□□ -1.21
UBE4B-202ENST00000343090 BMFQ96LC9 184 aa7.47□□□□□ -1.21
UBE4B-202ENST00000343090 CDC6Q99741 560 aa7.47□□□□□ -1.21
UBE4B-202ENST00000343090 NAA11Q9BSU3 229 aaPredicted RBP7.47□□□□□ -1.21
UBE4B-202ENST00000343090 SLC38A1Q9H2H9 487 aa7.47□□□□□ -1.21
UBE4B-202ENST00000343090 GFOD1Q9NXC2 390 aa7.47□□□□□ -1.21
UBE4B-202ENST00000343090 LSM5Q9Y4Y9 91 aaKnown RBP7.47□□□□□ -1.21
UBE4B-202ENST00000343090 PAPPAQ13219 1627 aa7.47□□□□□ -1.21
UBE4B-202ENST00000343090 A0A1B0GWA3 101 aa7.47□□□□□ -1.21
UBE4B-202ENST00000343090 D6RAR5 112 aa7.47□□□□□ -1.21
UBE4B-202ENST00000343090 KLK8O60259 260 aa7.47□□□□□ -1.21
UBE4B-202ENST00000343090 ZNF217O75362 1048 aa7.47□□□□□ -1.21
UBE4B-202ENST00000343090 CNOT4O95628 575 aaKnown RBP7.47□□□□□ -1.21
UBE4B-202ENST00000343090 CSF1P09603 554 aa7.47□□□□□ -1.21
UBE4B-202ENST00000343090 ZDHHC11BP0C7U3 371 aa7.47□□□□□ -1.21
UBE4B-202ENST00000343090 ETV5P41161 510 aa7.47□□□□□ -1.21
UBE4B-202ENST00000343090 SLC6A8P48029 635 aa7.47□□□□□ -1.21
UBE4B-202ENST00000343090 SLC48A1Q6P1K1 146 aa7.47□□□□□ -1.21
UBE4B-202ENST00000343090 ZNF836Q6ZNA1 936 aa7.47□□□□□ -1.21
UBE4B-202ENST00000343090 TMUB2Q71RG4 321 aa7.47□□□□□ -1.21
UBE4B-202ENST00000343090 PXKQ7Z7A4 578 aa7.47□□□□□ -1.21
UBE4B-202ENST00000343090 KIAA1958Q8N8K9 716 aa7.47□□□□□ -1.21
UBE4B-202ENST00000343090 OR4M1Q8NGD0 313 aa7.47□□□□□ -1.21
UBE4B-202ENST00000343090 OR51Q1Q8NH59 317 aa7.47□□□□□ -1.21
UBE4B-202ENST00000343090 LILRB1Q8NHL6 650 aaPredicted RBP7.47□□□□□ -1.21
UBE4B-202ENST00000343090 ABHD4Q8TB40 342 aa7.47□□□□□ -1.21
UBE4B-202ENST00000343090 OR14A2Q96R54 314 aa7.47□□□□□ -1.21
UBE4B-202ENST00000343090 PHB2Q99623 299 aa7.47□□□□□ -1.21
UBE4B-202ENST00000343090 ZDHHC5Q9C0B5 715 aa7.47□□□□□ -1.21
UBE4B-202ENST00000343090 SLC6A13Q9NSD5 602 aa7.47□□□□□ -1.21
UBE4B-202ENST00000343090 PLCXD1Q9NUJ7 323 aa7.47□□□□□ -1.21
UBE4B-202ENST00000343090 TMEFF2Q9UIK5 374 aaPredicted RBP7.47□□□□□ -1.21
UBE4B-202ENST00000343090 USP54Q70EL1 1684 aa7.46□□□□□ -1.21
UBE4B-202ENST00000343090 PEX11BO96011 259 aa7.46□□□□□ -1.21
UBE4B-202ENST00000343090 LCATP04180 440 aa7.46□□□□□ -1.21
UBE4B-202ENST00000343090 MFSD13AQ14CX5 517 aa7.46□□□□□ -1.21
UBE4B-202ENST00000343090 SFXN4Q6P4A7 337 aa7.46□□□□□ -1.21
UBE4B-202ENST00000343090 GPR155Q7Z3F1 870 aa7.46□□□□□ -1.21
UBE4B-202ENST00000343090 OR1J4Q8NGS1 313 aa7.46□□□□□ -1.21
UBE4B-202ENST00000343090 TBC1D20Q96BZ9 403 aa7.46□□□□□ -1.21
UBE4B-202ENST00000343090 PDXPQ96GD0 296 aa7.46□□□□□ -1.21
UBE4B-202ENST00000343090 LURAP1Q96LR2 239 aa7.46□□□□□ -1.21
UBE4B-202ENST00000343090 NECAB3Q96P71 396 aaPredicted RBP7.46□□□□□ -1.21
UBE4B-202ENST00000343090 TGIF2Q9GZN2 237 aa7.46□□□□□ -1.21
UBE4B-202ENST00000343090 ZNF160Q9HCG1 818 aa7.46□□□□□ -1.21
UBE4B-202ENST00000343090 UBQLN4Q9NRR5 601 aa7.46□□□□□ -1.21
UBE4B-202ENST00000343090 HIF3AQ9Y2N7 669 aa7.46□□□□□ -1.21
UBE4B-202ENST00000343090 UBE2J1Q9Y385 318 aaPredicted RBP7.46□□□□□ -1.21
UBE4B-202ENST00000343090 PRRT4C9JH25 899 aa7.46□□□□□ -1.21
UBE4B-202ENST00000343090 TSTD3H0UI37 97 aa7.46□□□□□ -1.21
UBE4B-202ENST00000343090 H0Y8X5 98 aa7.46□□□□□ -1.21
UBE4B-202ENST00000343090 HMGN4O00479 90 aa7.46□□□□□ -1.21
UBE4B-202ENST00000343090 FABP1P07148 127 aa7.46□□□□□ -1.21
UBE4B-202ENST00000343090 RAB5CP51148 216 aa7.46□□□□□ -1.21
UBE4B-202ENST00000343090 CXADRP78310 365 aa7.46□□□□□ -1.21
UBE4B-202ENST00000343090 POU3F1Q03052 451 aaPredicted RBP7.46□□□□□ -1.21
UBE4B-202ENST00000343090 SLC14A1Q13336 389 aa7.46□□□□□ -1.21
UBE4B-202ENST00000343090 TMEM88Q6PEY1 159 aa7.46□□□□□ -1.21
UBE4B-202ENST00000343090 ABHD12BQ7Z5M8 362 aaPredicted RBP7.46□□□□□ -1.21
UBE4B-202ENST00000343090 LRRC56Q8IYG6 542 aaPredicted RBP7.46□□□□□ -1.21
UBE4B-202ENST00000343090 ZNF511Q8NB15 262 aa7.46□□□□□ -1.21
UBE4B-202ENST00000343090 NINJ1Q92982 152 aa7.46□□□□□ -1.21
UBE4B-202ENST00000343090 LINC00052Q96N35 136 aa7.46□□□□□ -1.21
UBE4B-202ENST00000343090 C1QTNF3Q9BXJ4 246 aa7.46□□□□□ -1.21
UBE4B-202ENST00000343090 CHST8Q9H2A9 424 aa7.46□□□□□ -1.21
UBE4B-202ENST00000343090 INPP5EQ9NRR6 644 aa7.46□□□□□ -1.21
UBE4B-202ENST00000343090 ZNF281Q9Y2X9 895 aa7.46□□□□□ -1.21
UBE4B-202ENST00000343090 TMEM269A0A1B0GVZ9 245 aa7.46□□□□□ -1.22
UBE4B-202ENST00000343090 TMPRSS11DO60235 418 aa7.46□□□□□ -1.22
UBE4B-202ENST00000343090 SLC2A10O95528 541 aa7.46□□□□□ -1.22
UBE4B-202ENST00000343090 GLAP06280 429 aa7.46□□□□□ -1.22
UBE4B-202ENST00000343090 TACR3P29371 465 aa7.46□□□□□ -1.22
UBE4B-202ENST00000343090 ETV6P41212 452 aa7.46□□□□□ -1.22
UBE4B-202ENST00000343090 EMP2P54851 167 aa7.46□□□□□ -1.22
UBE4B-202ENST00000343090 CDKN3Q16667 212 aa7.46□□□□□ -1.22
UBE4B-202ENST00000343090 SLC22A6Q4U2R8 563 aa7.46□□□□□ -1.22
UBE4B-202ENST00000343090 TRMT12Q53H54 448 aaKnown RBP7.46□□□□□ -1.22
UBE4B-202ENST00000343090 NKAIN2Q5VXU1 208 aa7.46□□□□□ -1.22
UBE4B-202ENST00000343090 LCN10Q6JVE6 187 aa7.46□□□□□ -1.22
UBE4B-202ENST00000343090 NDUFAF7Q7L592 441 aa7.46□□□□□ -1.22
UBE4B-202ENST00000343090 ZNF546Q86UE3 836 aa7.46□□□□□ -1.22
UBE4B-202ENST00000343090 ZNF100Q8IYN0 542 aa7.46□□□□□ -1.22
UBE4B-202ENST00000343090 SPPL3Q8TCT6 385 aa7.46□□□□□ -1.22
UBE4B-202ENST00000343090 UCN3Q969E3 161 aa7.46□□□□□ -1.22
UBE4B-202ENST00000343090 C3orf49Q96BT1 292 aa7.46□□□□□ -1.22
UBE4B-202ENST00000343090 ZNF775Q96BV0 537 aaPredicted RBP7.46□□□□□ -1.22
UBE4B-202ENST00000343090 OPALINQ96PE5 141 aa7.46□□□□□ -1.22
UBE4B-202ENST00000343090 SEC22CQ9BRL7 303 aa7.46□□□□□ -1.22
UBE4B-202ENST00000343090 LMF2Q9BU23 707 aaKnown RBP7.46□□□□□ -1.22
UBE4B-202ENST00000343090 ALG12Q9BV10 488 aa7.46□□□□□ -1.22
UBE4B-202ENST00000343090 C20orf85Q9H1P6 137 aa7.46□□□□□ -1.22
UBE4B-202ENST00000343090 LRIT1Q9P2V4 623 aa7.46□□□□□ -1.22
UBE4B-202ENST00000343090 ICKQ9UPZ9 632 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms