RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 IFNA4P05014 189 aa8.86□□□□□ -0.99
HOXA1-201ENST00000343060 ITGB2P05107 769 aa8.86□□□□□ -0.99
HOXA1-201ENST00000343060 PRKAR2AP13861 404 aaKnown RBP8.86□□□□□ -0.99
HOXA1-201ENST00000343060 ADRA2CP18825 462 aa8.86□□□□□ -0.99
HOXA1-201ENST00000343060 PSMB10P40306 273 aa8.86□□□□□ -0.99
HOXA1-201ENST00000343060 AKR1D1P51857 326 aa8.86□□□□□ -0.99
HOXA1-201ENST00000343060 UBE2MP61081 183 aaKnown RBP8.86□□□□□ -0.99
HOXA1-201ENST00000343060 PLAURQ03405 335 aa8.86□□□□□ -0.99
HOXA1-201ENST00000343060 SSBP1Q04837 148 aaKnown RBP8.86□□□□□ -0.99
HOXA1-201ENST00000343060 IRF4Q15306 451 aa8.86□□□□□ -0.99
HOXA1-201ENST00000343060 OR2W3Q7Z3T1 314 aa8.86□□□□□ -0.99
HOXA1-201ENST00000343060 SLC35F3Q8IY50 421 aa8.86□□□□□ -0.99
HOXA1-201ENST00000343060 ZNF433Q8N7K0 673 aaPredicted RBP8.86□□□□□ -0.99
HOXA1-201ENST00000343060 SDR9C7Q8NEX9 313 aa8.86□□□□□ -0.99
HOXA1-201ENST00000343060 OR2A1Q8NGT9 310 aa8.86□□□□□ -0.99
HOXA1-201ENST00000343060 SLC25A28Q96A46 364 aa8.86□□□□□ -0.99
HOXA1-201ENST00000343060 C6orf106Q9H6K1 298 aaPredicted RBP8.86□□□□□ -0.99
HOXA1-201ENST00000343060 FANCFQ9NPI8 374 aa8.86□□□□□ -0.99
HOXA1-201ENST00000343060 TNFSF18Q9UNG2 199 aa8.86□□□□□ -0.99
HOXA1-201ENST00000343060 CCL26Q9Y258 94 aa8.86□□□□□ -0.99
HOXA1-201ENST00000343060 CARHSP1Q9Y2V2 147 aaKnown RBP8.86□□□□□ -0.99
HOXA1-201ENST00000343060 ZNF780BQ9Y6R6 833 aa8.86□□□□□ -0.99
HOXA1-201ENST00000343060 ARPC4-TTLL3A0A0A6YYG9 625 aa8.85□□□□□ -0.99
HOXA1-201ENST00000343060 TRBV5-5A0A0J9YX44 114 aa8.85□□□□□ -0.99
HOXA1-201ENST00000343060 A0A1W2PRU2 124 aa8.85□□□□□ -0.99
HOXA1-201ENST00000343060 ZFPL1O95159 310 aa8.85□□□□□ -0.99
HOXA1-201ENST00000343060 PMS2P2O95744 297 aa8.85□□□□□ -0.99
HOXA1-201ENST00000343060 RLN1P04808 185 aa8.85□□□□□ -0.99
HOXA1-201ENST00000343060 GKN3PP0CG01 181 aa8.85□□□□□ -0.99
HOXA1-201ENST00000343060 TMIGD3P0DMS9 266 aaPredicted RBP8.85□□□□□ -0.99
HOXA1-201ENST00000343060 EPCAMP16422 314 aa8.85□□□□□ -0.99
HOXA1-201ENST00000343060 ADCYAP1P18509 176 aa8.85□□□□□ -0.99
HOXA1-201ENST00000343060 ACHEP22303 614 aa8.85□□□□□ -0.99
HOXA1-201ENST00000343060 ITPKBP27987 946 aa8.85□□□□□ -0.99
HOXA1-201ENST00000343060 NAA10P41227 235 aaPredicted RBP8.85□□□□□ -0.99
HOXA1-201ENST00000343060 NANOS3P60323 173 aaKnown RBP8.85□□□□□ -0.99
HOXA1-201ENST00000343060 SLC35D3Q5M8T2 416 aa8.85□□□□□ -0.99
HOXA1-201ENST00000343060 ELP2Q6IA86 826 aa8.85□□□□□ -0.99
HOXA1-201ENST00000343060 LPCAT3Q6P1A2 487 aa8.85□□□□□ -0.99
HOXA1-201ENST00000343060 PGAP1Q75T13 922 aa8.85□□□□□ -0.99
HOXA1-201ENST00000343060 ZNF546Q86UE3 836 aa8.85□□□□□ -0.99
HOXA1-201ENST00000343060 OR51A7Q8NH64 312 aa8.85□□□□□ -0.99
HOXA1-201ENST00000343060 RBM18Q96H35 190 aaKnown RBP8.85□□□□□ -0.99
HOXA1-201ENST00000343060 SPHK2Q9NRA0 654 aa8.85□□□□□ -0.99
HOXA1-201ENST00000343060 FBXL21Q9UKT6 434 aa8.85□□□□□ -0.99
HOXA1-201ENST00000343060 NUP210LQ5VU65 1888 aa8.85□□□□□ -0.99
HOXA1-201ENST00000343060 A0A0B4J2E0 115 aa8.85□□□□□ -0.99
HOXA1-201ENST00000343060 A0A1B0GX12 115 aa8.85□□□□□ -0.99
HOXA1-201ENST00000343060 GXYLT2A0PJZ3 443 aa8.85□□□□□ -0.99
HOXA1-201ENST00000343060 DISC1C4P0D8 188 aa8.85□□□□□ -0.99
HOXA1-201ENST00000343060 GPR31O00270 319 aa8.85□□□□□ -0.99
HOXA1-201ENST00000343060 TGM5O43548 720 aa8.85□□□□□ -0.99
HOXA1-201ENST00000343060 AKAIN1P0CW23 69 aa8.85□□□□□ -0.99
HOXA1-201ENST00000343060 HIST1H1CP16403 213 aaKnown RBP8.85□□□□□ -0.99
HOXA1-201ENST00000343060 RBM34P42696 430 aaKnown RBP8.85□□□□□ -0.99
HOXA1-201ENST00000343060 METAP1P53582 386 aa8.85□□□□□ -0.99
HOXA1-201ENST00000343060 COL9A2Q14055 689 aaPredicted RBP8.85□□□□□ -0.99
HOXA1-201ENST00000343060 SERTAD2Q14140 314 aa8.85□□□□□ -0.99
HOXA1-201ENST00000343060 GLT8D1Q68CQ7 371 aa8.85□□□□□ -0.99
HOXA1-201ENST00000343060 HAGHLQ6PII5 290 aaPredicted RBP8.85□□□□□ -0.99
HOXA1-201ENST00000343060 ADAMTSL4Q6UY14 1074 aa8.85□□□□□ -0.99
HOXA1-201ENST00000343060 SLC39A11Q8N1S5 342 aa8.85□□□□□ -0.99
HOXA1-201ENST00000343060 LRRC25Q8N386 305 aaPredicted RBP8.85□□□□□ -0.99
HOXA1-201ENST00000343060 TMEM185AQ8NFB2 350 aa8.85□□□□□ -0.99
HOXA1-201ENST00000343060 OR4D10Q8NGI6 311 aa8.85□□□□□ -0.99
HOXA1-201ENST00000343060 OR52E2Q8NGJ4 325 aa8.85□□□□□ -0.99
HOXA1-201ENST00000343060 OR8K3Q8NH51 312 aa8.85□□□□□ -0.99
HOXA1-201ENST00000343060 TNFRSF13CQ96RJ3 184 aa8.85□□□□□ -0.99
HOXA1-201ENST00000343060 TSNAXQ99598 290 aaKnown RBP8.85□□□□□ -0.99
HOXA1-201ENST00000343060 NMNAT2Q9BZQ4 307 aa8.85□□□□□ -0.99
HOXA1-201ENST00000343060 KCNE5Q9UJ90 142 aa8.85□□□□□ -0.99
HOXA1-201ENST00000343060 ERVK-19Q9WJR5 959 aa8.85□□□□□ -0.99
HOXA1-201ENST00000343060 ZNF337Q9Y3M9 751 aa8.85□□□□□ -0.99
HOXA1-201ENST00000343060 COL4A2P08572 1712 aa8.85□□□□□ -0.99
HOXA1-201ENST00000343060 KANTRA0A1W2PQU2 76 aa8.84□□□□□ -0.99
HOXA1-201ENST00000343060 GGT3PA6NGU5 568 aa8.84□□□□□ -0.99
HOXA1-201ENST00000343060 STATHP02808 62 aa8.84□□□□□ -0.99
HOXA1-201ENST00000343060 LAMP2P13473 410 aa8.84□□□□□ -0.99
HOXA1-201ENST00000343060 STARP49675 285 aa8.84□□□□□ -0.99
HOXA1-201ENST00000343060 NTHL1P78549 312 aa8.84□□□□□ -0.99
HOXA1-201ENST00000343060 LTBQ06643 244 aa8.84□□□□□ -0.99
HOXA1-201ENST00000343060 Q499Y3 187 aa8.84□□□□□ -0.99
HOXA1-201ENST00000343060 PAN3Q58A45 887 aaKnown RBP8.84□□□□□ -0.99
HOXA1-201ENST00000343060 SLC6A19Q695T7 634 aa8.84□□□□□ -0.99
HOXA1-201ENST00000343060 ANKRD16Q6P6B7 361 aa8.84□□□□□ -0.99
HOXA1-201ENST00000343060 ERN2Q76MJ5 926 aaKnown RBP8.84□□□□□ -0.99
HOXA1-201ENST00000343060 SLAIN1Q8ND83 568 aa8.84□□□□□ -0.99
HOXA1-201ENST00000343060 OR5M8Q8NGP6 311 aa8.84□□□□□ -0.99
HOXA1-201ENST00000343060 CCDC107Q8WV48 283 aa8.84□□□□□ -0.99
HOXA1-201ENST00000343060 PMM1Q92871 262 aa8.84□□□□□ -0.99
HOXA1-201ENST00000343060 ARRDC3Q96B67 414 aa8.84□□□□□ -0.99
HOXA1-201ENST00000343060 MACROD1Q9BQ69 325 aa8.84□□□□□ -0.99
HOXA1-201ENST00000343060 ZNF559Q9BR84 538 aa8.84□□□□□ -0.99
HOXA1-201ENST00000343060 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.84□□□□□ -0.99
HOXA1-201ENST00000343060 SLITRK2Q9H156 845 aa8.84□□□□□ -0.99
HOXA1-201ENST00000343060 TMEM138Q9NPI0 162 aa8.84□□□□□ -0.99
HOXA1-201ENST00000343060 APOBEC3BQ9UH17 382 aaKnown RBP8.84□□□□□ -0.99
HOXA1-201ENST00000343060 ABT1Q9ULW3 272 aaKnown RBP8.84□□□□□ -0.99
HOXA1-201ENST00000343060 YBX2Q9Y2T7 364 aaKnown RBP8.84□□□□□ -0.99
HOXA1-201ENST00000343060 TRBV5-7A0A0A0MS05 114 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms