RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 LIM2P55344 173 aa13.88□□□□□ -0.19
UBE3B-202ENST00000342494 TAS2R19P59542 299 aa13.88□□□□□ -0.19
UBE3B-202ENST00000342494 PYCR3Q53H96 274 aa13.88□□□□□ -0.19
UBE3B-202ENST00000342494 GIMAP5Q96F15 307 aa13.88□□□□□ -0.19
UBE3B-202ENST00000342494 MENTQ9BUN1 341 aa13.88□□□□□ -0.19
UBE3B-202ENST00000342494 TMEM59Q9BXS4 323 aa13.88□□□□□ -0.19
UBE3B-202ENST00000342494 FKRPQ9H9S5 495 aa13.88□□□□□ -0.19
UBE3B-202ENST00000342494 SLAMF8Q9P0V8 285 aa13.88□□□□□ -0.19
UBE3B-202ENST00000342494 CLDN6P56747 220 aa13.88□□□□□ -0.19
UBE3B-202ENST00000342494 HES1Q14469 280 aa13.88□□□□□ -0.19
UBE3B-202ENST00000342494 ZNF750Q32MQ0 723 aa13.88□□□□□ -0.19
UBE3B-202ENST00000342494 SFRP5Q5T4F7 317 aa13.88□□□□□ -0.19
UBE3B-202ENST00000342494 AFMIDQ63HM1 303 aa13.88□□□□□ -0.19
UBE3B-202ENST00000342494 CENPOQ9BU64 300 aa13.88□□□□□ -0.19
UBE3B-202ENST00000342494 GFOD1Q9NXC2 390 aa13.88□□□□□ -0.19
UBE3B-202ENST00000342494 SLC23A2Q9UGH3 650 aa13.88□□□□□ -0.19
UBE3B-202ENST00000342494 TCHHQ07283 1943 aa13.88□□□□□ -0.19
UBE3B-202ENST00000342494 GPR85P60893 370 aa13.88□□□□□ -0.19
UBE3B-202ENST00000342494 RDH10Q8IZV5 341 aa13.88□□□□□ -0.19
UBE3B-202ENST00000342494 OR1N1Q8NGS0 311 aa13.88□□□□□ -0.19
UBE3B-202ENST00000342494 UBL7Q96S82 380 aaPredicted RBP13.88□□□□□ -0.19
UBE3B-202ENST00000342494 NMNAT3Q96T66 252 aa13.88□□□□□ -0.19
UBE3B-202ENST00000342494 NKX3-1Q99801 234 aaPredicted RBP13.88□□□□□ -0.19
UBE3B-202ENST00000342494 SLC25A31Q9H0C2 315 aa13.88□□□□□ -0.19
UBE3B-202ENST00000342494 DEFB127Q9H1M4 99 aa13.88□□□□□ -0.19
UBE3B-202ENST00000342494 LOXL2Q9Y4K0 774 aa13.88□□□□□ -0.19
UBE3B-202ENST00000342494 PRRT4C9JH25 899 aa13.87□□□□□ -0.19
UBE3B-202ENST00000342494 K7ESM1 405 aa13.87□□□□□ -0.19
UBE3B-202ENST00000342494 NRG2O14511 850 aaPredicted RBP13.87□□□□□ -0.19
UBE3B-202ENST00000342494 NPPBP16860 134 aa13.87□□□□□ -0.19
UBE3B-202ENST00000342494 TRHRP34981 398 aaPredicted RBP13.87□□□□□ -0.19
UBE3B-202ENST00000342494 SLC1A3P43003 542 aa13.87□□□□□ -0.19
UBE3B-202ENST00000342494 PDLIM3Q53GG5 364 aaPredicted RBP13.87□□□□□ -0.19
UBE3B-202ENST00000342494 PRICKLE2Q7Z3G6 844 aa13.87□□□□□ -0.19
UBE3B-202ENST00000342494 LINC00346Q8IVM7 164 aa13.87□□□□□ -0.19
UBE3B-202ENST00000342494 GLB1L2Q8IW92 636 aa13.87□□□□□ -0.19
UBE3B-202ENST00000342494 LRRC56Q8IYG6 542 aaPredicted RBP13.87□□□□□ -0.19
UBE3B-202ENST00000342494 OR5D18Q8NGL1 313 aa13.87□□□□□ -0.19
UBE3B-202ENST00000342494 STK35Q8TDR2 534 aa13.87□□□□□ -0.19
UBE3B-202ENST00000342494 ZBTB8AQ96BR9 441 aa13.87□□□□□ -0.19
UBE3B-202ENST00000342494 ZDHHC5Q9C0B5 715 aa13.87□□□□□ -0.19
UBE3B-202ENST00000342494 MED17Q9NVC6 651 aa13.87□□□□□ -0.19
UBE3B-202ENST00000342494 POM121BA6NF01 834 aa13.87□□□□□ -0.19
UBE3B-202ENST00000342494 PTTG1O95997 202 aa13.87□□□□□ -0.19
UBE3B-202ENST00000342494 IL2RAP01589 272 aa13.87□□□□□ -0.19
UBE3B-202ENST00000342494 VEGFCP49767 419 aa13.87□□□□□ -0.19
UBE3B-202ENST00000342494 ZNF91Q05481 1191 aa13.87□□□□□ -0.19
UBE3B-202ENST00000342494 CCSMST1Q4G0I0 132 aa13.87□□□□□ -0.19
UBE3B-202ENST00000342494 ZNF679Q8IYX0 411 aa13.87□□□□□ -0.19
UBE3B-202ENST00000342494 SLC25A43Q8WUT9 341 aaPredicted RBP13.87□□□□□ -0.19
UBE3B-202ENST00000342494 WDR76Q9H967 626 aa13.87□□□□□ -0.19
UBE3B-202ENST00000342494 LIN7BQ9HAP6 207 aa13.87□□□□□ -0.19
UBE3B-202ENST00000342494 LYRM4Q9HD34 91 aa13.87□□□□□ -0.19
UBE3B-202ENST00000342494 ZNF891A8MT65 544 aaPredicted RBP13.87□□□□□ -0.19
UBE3B-202ENST00000342494 TARM1B6A8C7 271 aa13.87□□□□□ -0.19
UBE3B-202ENST00000342494 TNFSF15O95150 251 aa13.87□□□□□ -0.19
UBE3B-202ENST00000342494 PAHP00439 452 aa13.87□□□□□ -0.19
UBE3B-202ENST00000342494 MAKP20794 623 aa13.87□□□□□ -0.19
UBE3B-202ENST00000342494 CCR5P51681 352 aa13.87□□□□□ -0.19
UBE3B-202ENST00000342494 KRBOX4Q5JUW0 171 aa13.87□□□□□ -0.19
UBE3B-202ENST00000342494 ELP2Q6IA86 826 aa13.87□□□□□ -0.19
UBE3B-202ENST00000342494 MFSD12Q6NUT3 480 aa13.87□□□□□ -0.19
UBE3B-202ENST00000342494 CMIPQ8IY22 773 aa13.87□□□□□ -0.19
UBE3B-202ENST00000342494 SPEM1Q8N4L4 309 aa13.87□□□□□ -0.19
UBE3B-202ENST00000342494 SCCPDHQ8NBX0 429 aa13.87□□□□□ -0.19
UBE3B-202ENST00000342494 TMEM174Q8WUU8 243 aa13.87□□□□□ -0.19
UBE3B-202ENST00000342494 MALSU1Q96EH3 234 aa13.87□□□□□ -0.19
UBE3B-202ENST00000342494 ELF4Q99607 663 aaPredicted RBP13.87□□□□□ -0.19
UBE3B-202ENST00000342494 MFRPQ9BY79 579 aa13.87□□□□□ -0.19
UBE3B-202ENST00000342494 NDUFAF4Q9P032 175 aa13.87□□□□□ -0.19
UBE3B-202ENST00000342494 A6NIN4 97 aa13.87□□□□□ -0.19
UBE3B-202ENST00000342494 B3GALT4O96024 378 aa13.87□□□□□ -0.19
UBE3B-202ENST00000342494 GASTP01350 101 aa13.87□□□□□ -0.19
UBE3B-202ENST00000342494 PTPN6P29350 595 aa13.87□□□□□ -0.19
UBE3B-202ENST00000342494 PRKAR1BP31321 381 aa13.87□□□□□ -0.19
UBE3B-202ENST00000342494 ALDH3B1P43353 468 aa13.87□□□□□ -0.19
UBE3B-202ENST00000342494 DUSP7Q16829 419 aa13.87□□□□□ -0.19
UBE3B-202ENST00000342494 NIPAL2Q9H841 368 aa13.87□□□□□ -0.19
UBE3B-202ENST00000342494 CDHR4A6H8M9 788 aa13.87□□□□□ -0.19
UBE3B-202ENST00000342494 NOTOA8MTQ0 251 aa13.87□□□□□ -0.19
UBE3B-202ENST00000342494 B4GAT1O43505 415 aa13.87□□□□□ -0.19
UBE3B-202ENST00000342494 GABRB3P28472 473 aa13.87□□□□□ -0.19
UBE3B-202ENST00000342494 SCGB2A2Q13296 93 aa13.87□□□□□ -0.19
UBE3B-202ENST00000342494 MUL1Q969V5 352 aa13.87□□□□□ -0.19
UBE3B-202ENST00000342494 FAM234AQ9H0X4 552 aa13.87□□□□□ -0.19
UBE3B-202ENST00000342494 ASF1BQ9NVP2 202 aa13.87□□□□□ -0.19
UBE3B-202ENST00000342494 TBX21Q9UL17 535 aa13.87□□□□□ -0.19
UBE3B-202ENST00000342494 KLF13Q9Y2Y9 288 aaPredicted RBP13.87□□□□□ -0.19
UBE3B-202ENST00000342494 NRXN3Q9Y4C0 1643 aa13.86□□□□□ -0.19
UBE3B-202ENST00000342494 BTBD17A6NE02 478 aa13.86□□□□□ -0.19
UBE3B-202ENST00000342494 IDSB3KWA1 339 aa13.86□□□□□ -0.19
UBE3B-202ENST00000342494 ZNF732B4DXR9 585 aa13.86□□□□□ -0.19
UBE3B-202ENST00000342494 MKRN2OSH3BPM6 223 aa13.86□□□□□ -0.19
UBE3B-202ENST00000342494 SPDEFO95238 335 aa13.86□□□□□ -0.19
UBE3B-202ENST00000342494 IGHV3-9P01782 118 aa13.86□□□□□ -0.19
UBE3B-202ENST00000342494 DEFB109BQ30KR1 87 aa13.86□□□□□ -0.19
UBE3B-202ENST00000342494 C1orf140Q5VVS0 124 aa13.86□□□□□ -0.19
UBE3B-202ENST00000342494 SYT13Q7L8C5 426 aa13.86□□□□□ -0.19
UBE3B-202ENST00000342494 KIF25Q9UIL4 384 aa13.86□□□□□ -0.19
UBE3B-202ENST00000342494 NPFFR2Q9Y5X5 522 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms