RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 RPS7P62081 194 aaKnown RBP15.64■□□□□ 0.09
CLDN4-201ENST00000340958 EFNB1P98172 346 aa15.64■□□□□ 0.09
CLDN4-201ENST00000340958 ST3GAL4Q11206 333 aa15.64■□□□□ 0.09
CLDN4-201ENST00000340958 MFAP5Q13361 173 aa15.64■□□□□ 0.09
CLDN4-201ENST00000340958 OR4K13Q8NH42 304 aa15.64■□□□□ 0.09
CLDN4-201ENST00000340958 SLC25A43Q8WUT9 341 aaPredicted RBP15.64■□□□□ 0.09
CLDN4-201ENST00000340958 POTEKPQ9BYX7 375 aa15.64■□□□□ 0.09
CLDN4-201ENST00000340958 DEPPQ9NTK1 212 aa15.64■□□□□ 0.09
CLDN4-201ENST00000340958 GRHPRQ9UBQ7 328 aa15.64■□□□□ 0.09
CLDN4-201ENST00000340958 KLHL21Q9UJP4 597 aa15.64■□□□□ 0.09
CLDN4-201ENST00000340958 SLC6A5Q9Y345 797 aa15.64■□□□□ 0.09
CLDN4-201ENST00000340958 CORINQ9Y5Q5 1042 aa15.64■□□□□ 0.09
CLDN4-201ENST00000340958 M0R082 166 aa15.64■□□□□ 0.09
CLDN4-201ENST00000340958 FADS2O95864 444 aaKnown RBP15.64■□□□□ 0.09
CLDN4-201ENST00000340958 MT-ND2P03891 347 aa15.64■□□□□ 0.09
CLDN4-201ENST00000340958 SRD5A2P31213 254 aa15.64■□□□□ 0.09
CLDN4-201ENST00000340958 ATP6V1E1P36543 226 aa15.64■□□□□ 0.09
CLDN4-201ENST00000340958 ZNF91Q05481 1191 aa15.64■□□□□ 0.09
CLDN4-201ENST00000340958 TMEM176BQ3YBM2 270 aaPredicted RBP15.64■□□□□ 0.09
CLDN4-201ENST00000340958 NADK2Q4G0N4 442 aa15.64■□□□□ 0.09
CLDN4-201ENST00000340958 CRTC2Q53ET0 693 aaPredicted RBP15.64■□□□□ 0.09
CLDN4-201ENST00000340958 KLHL12Q53G59 568 aa15.64■□□□□ 0.09
CLDN4-201ENST00000340958 PRSS48Q7RTY5 328 aa15.64■□□□□ 0.09
CLDN4-201ENST00000340958 JAZF1Q86VZ6 243 aa15.64■□□□□ 0.09
CLDN4-201ENST00000340958 SULF2Q8IWU5 870 aa15.64■□□□□ 0.09
CLDN4-201ENST00000340958 OR6S1Q8NH40 331 aa15.64■□□□□ 0.09
CLDN4-201ENST00000340958 MFSD8Q8NHS3 518 aa15.64■□□□□ 0.09
CLDN4-201ENST00000340958 ZNF417Q8TAU3 575 aa15.64■□□□□ 0.09
CLDN4-201ENST00000340958 SMPDL3BQ92485 455 aa15.64■□□□□ 0.09
CLDN4-201ENST00000340958 ZNF587Q96SQ5 575 aaPredicted RBP15.64■□□□□ 0.09
CLDN4-201ENST00000340958 FN3KQ9H479 309 aa15.64■□□□□ 0.09
CLDN4-201ENST00000340958 NRIP3Q9NQ35 241 aa15.64■□□□□ 0.09
CLDN4-201ENST00000340958 CNOT2Q9NZN8 540 aaKnown RBP15.64■□□□□ 0.09
CLDN4-201ENST00000340958 DOCK10Q96BY6 2186 aa15.63■□□□□ 0.09
CLDN4-201ENST00000340958 CCDC160A6NGH7 325 aa15.63■□□□□ 0.09
CLDN4-201ENST00000340958 CDK2AP1O14519 115 aa15.63■□□□□ 0.09
CLDN4-201ENST00000340958 EFSO43281 561 aa15.63■□□□□ 0.09
CLDN4-201ENST00000340958 EFNA2O43921 213 aa15.63■□□□□ 0.09
CLDN4-201ENST00000340958 MRPS14O60783 128 aaKnown RBP15.63■□□□□ 0.09
CLDN4-201ENST00000340958 CDK1P06493 297 aa15.63■□□□□ 0.09
CLDN4-201ENST00000340958 CD14P08571 375 aa15.63■□□□□ 0.09
CLDN4-201ENST00000340958 STSP08842 583 aa15.63■□□□□ 0.09
CLDN4-201ENST00000340958 DBTP11182 482 aaKnown RBP15.63■□□□□ 0.09
CLDN4-201ENST00000340958 HIST1H1CP16403 213 aaKnown RBP15.63■□□□□ 0.09
CLDN4-201ENST00000340958 PLGLB1Q02325 96 aa15.63■□□□□ 0.09
CLDN4-201ENST00000340958 MYBPHQ13203 477 aa15.63■□□□□ 0.09
CLDN4-201ENST00000340958 SGCBQ16585 318 aa15.63■□□□□ 0.09
CLDN4-201ENST00000340958 GLYR1Q49A26 553 aaPredicted RBP15.63■□□□□ 0.09
CLDN4-201ENST00000340958 KLHL22Q53GT1 634 aa15.63■□□□□ 0.09
CLDN4-201ENST00000340958 NXNL2Q5VZ03 156 aa15.63■□□□□ 0.09
CLDN4-201ENST00000340958 SLC25A25Q6KCM7 469 aa15.63■□□□□ 0.09
CLDN4-201ENST00000340958 GPR141Q7Z602 305 aa15.63■□□□□ 0.09
CLDN4-201ENST00000340958 YRDCQ86U90 279 aaKnown RBP15.63■□□□□ 0.09
CLDN4-201ENST00000340958 GID4Q8IVV7 300 aa15.63■□□□□ 0.09
CLDN4-201ENST00000340958 FDCSPQ8NFU4 85 aa15.63■□□□□ 0.09
CLDN4-201ENST00000340958 OR2M7Q8NG81 312 aa15.63■□□□□ 0.09
CLDN4-201ENST00000340958 UBL7Q96S82 380 aaPredicted RBP15.63■□□□□ 0.09
CLDN4-201ENST00000340958 HES7Q9BYE0 225 aa15.63■□□□□ 0.09
CLDN4-201ENST00000340958 OR51V1Q9H2C8 321 aa15.63■□□□□ 0.09
CLDN4-201ENST00000340958 ZNF552Q9H707 407 aaPredicted RBP15.63■□□□□ 0.09
CLDN4-201ENST00000340958 HINT3Q9NQE9 182 aaKnown RBP15.63■□□□□ 0.09
CLDN4-201ENST00000340958 SEC14L4Q9UDX3 406 aa15.63■□□□□ 0.09
CLDN4-201ENST00000340958 KLF13Q9Y2Y9 288 aaPredicted RBP15.63■□□□□ 0.09
CLDN4-201ENST00000340958 COMMD3-BMI1R4GMX3 469 aa15.63■□□□□ 0.09
CLDN4-201ENST00000340958 ZFYVE26Q68DK2 2539 aa15.62■□□□□ 0.09
CLDN4-201ENST00000340958 EML6Q6ZMW3 1958 aa15.62■□□□□ 0.09
CLDN4-201ENST00000340958 IRGMA1A4Y4 181 aa15.62■□□□□ 0.09
CLDN4-201ENST00000340958 KDM4EB2RXH2 506 aaPredicted RBP15.62■□□□□ 0.09
CLDN4-201ENST00000340958 KLRC4-KLRK1H3BQV0 150 aa15.62■□□□□ 0.09
CLDN4-201ENST00000340958 IDH3BO43837 385 aa15.62■□□□□ 0.09
CLDN4-201ENST00000340958 ZIC3O60481 467 aa15.62■□□□□ 0.09
CLDN4-201ENST00000340958 SP1P08047 785 aa15.62■□□□□ 0.09
CLDN4-201ENST00000340958 HTR1AP08908 422 aa15.62■□□□□ 0.09
CLDN4-201ENST00000340958 ZNF17P17021 662 aa15.62■□□□□ 0.09
CLDN4-201ENST00000340958 C21orf33P30042 268 aaPredicted RBP15.62■□□□□ 0.09
CLDN4-201ENST00000340958 UQCRC1P31930 480 aa15.62■□□□□ 0.09
CLDN4-201ENST00000340958 TMPRSS3P57727 454 aa15.62■□□□□ 0.09
CLDN4-201ENST00000340958 OR2B6P58173 313 aa15.62■□□□□ 0.09
CLDN4-201ENST00000340958 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.62■□□□□ 0.09
CLDN4-201ENST00000340958 ITGADQ13349 1161 aa15.62■□□□□ 0.09
CLDN4-201ENST00000340958 CNPY1Q3B7I2 92 aa15.62■□□□□ 0.09
CLDN4-201ENST00000340958 CYB561A3Q8NBI2 242 aa15.62■□□□□ 0.09
CLDN4-201ENST00000340958 SDR9C7Q8NEX9 313 aa15.62■□□□□ 0.09
CLDN4-201ENST00000340958 BBS1Q8NFJ9 593 aa15.62■□□□□ 0.09
CLDN4-201ENST00000340958 NTNG2Q96CW9 530 aa15.62■□□□□ 0.09
CLDN4-201ENST00000340958 RNFT2Q96EX2 444 aa15.62■□□□□ 0.09
CLDN4-201ENST00000340958 GPX7Q96SL4 187 aaPredicted RBP15.62■□□□□ 0.09
CLDN4-201ENST00000340958 MED20Q9H944 212 aa15.62■□□□□ 0.09
CLDN4-201ENST00000340958 INIPQ9NRY2 104 aa15.62■□□□□ 0.09
CLDN4-201ENST00000340958 MRPL39Q9NYK5 338 aaKnown RBP15.62■□□□□ 0.09
CLDN4-201ENST00000340958 CHD6Q8TD26 2715 aa15.62■□□□□ 0.09
CLDN4-201ENST00000340958 ATMQ13315 3056 aa15.62■□□□□ 0.09
CLDN4-201ENST00000340958 TEX13CA0A0J9YWL9 993 aa15.61■□□□□ 0.09
CLDN4-201ENST00000340958 OR2M5A3KFT3 312 aa15.61■□□□□ 0.09
CLDN4-201ENST00000340958 LRRC3CA6NJW4 275 aa15.61■□□□□ 0.09
CLDN4-201ENST00000340958 TRIM64CA6NLI5 447 aa15.61■□□□□ 0.09
CLDN4-201ENST00000340958 GJE1A6NN92 205 aa15.61■□□□□ 0.09
CLDN4-201ENST00000340958 ARPC3O15145 178 aa15.61■□□□□ 0.09
CLDN4-201ENST00000340958 PLGP00747 810 aaPredicted RBP15.61■□□□□ 0.09
CLDN4-201ENST00000340958 RFPL3SP0C7P2 107 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms