RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 TMEM225Q6GV28 225 aa13.57□□□□□ -0.24
VAPA-201ENST00000340541 PRSS57Q6UWY2 283 aa13.57□□□□□ -0.24
VAPA-201ENST00000340541 CASP12Q6UXS9 341 aa13.57□□□□□ -0.24
VAPA-201ENST00000340541 CREB3L2Q70SY1 520 aa13.57□□□□□ -0.24
VAPA-201ENST00000340541 BHLHA15Q7RTS1 189 aaPredicted RBP13.57□□□□□ -0.24
VAPA-201ENST00000340541 GPAT4Q86UL3 456 aa13.57□□□□□ -0.24
VAPA-201ENST00000340541 CARM1Q86X55 608 aa13.57□□□□□ -0.24
VAPA-201ENST00000340541 KDM8Q8N371 416 aa13.57□□□□□ -0.24
VAPA-201ENST00000340541 ZNF433Q8N7K0 673 aaPredicted RBP13.57□□□□□ -0.24
VAPA-201ENST00000340541 ZNF417Q8TAU3 575 aa13.57□□□□□ -0.24
VAPA-201ENST00000340541 PROX1Q92786 737 aa13.57□□□□□ -0.24
VAPA-201ENST00000340541 KISS1RQ969F8 398 aaPredicted RBP13.57□□□□□ -0.24
VAPA-201ENST00000340541 SLC41A3Q96GZ6 507 aa13.57□□□□□ -0.24
VAPA-201ENST00000340541 ZNF587Q96SQ5 575 aaPredicted RBP13.57□□□□□ -0.24
VAPA-201ENST00000340541 ZNF426Q9BUY5 554 aa13.57□□□□□ -0.24
VAPA-201ENST00000340541 ALG2Q9H553 416 aa13.57□□□□□ -0.24
VAPA-201ENST00000340541 PARPBPQ9NWS1 579 aa13.57□□□□□ -0.24
VAPA-201ENST00000340541 SELENONQ9NZV5 590 aa13.57□□□□□ -0.24
VAPA-201ENST00000340541 RASD1Q9Y272 281 aa13.57□□□□□ -0.24
VAPA-201ENST00000340541 RAI1Q7Z5J4 1906 aaPredicted RBP13.56□□□□□ -0.24
VAPA-201ENST00000340541 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.56□□□□□ -0.24
VAPA-201ENST00000340541 TRAPPC13A5PLN9 417 aa13.56□□□□□ -0.24
VAPA-201ENST00000340541 LRRN3E7EW58 273 aa13.56□□□□□ -0.24
VAPA-201ENST00000340541 IFNA14P01570 189 aa13.56□□□□□ -0.24
VAPA-201ENST00000340541 IL32P24001 234 aa13.56□□□□□ -0.24
VAPA-201ENST00000340541 TSPO2Q5TGU0 170 aa13.56□□□□□ -0.24
VAPA-201ENST00000340541 AAED1Q7RTV5 226 aa13.56□□□□□ -0.24
VAPA-201ENST00000340541 ANKS4BQ8N8V4 417 aa13.56□□□□□ -0.24
VAPA-201ENST00000340541 RNF217Q8TC41 542 aa13.56□□□□□ -0.24
VAPA-201ENST00000340541 PIK3IP1Q96FE7 263 aa13.56□□□□□ -0.24
VAPA-201ENST00000340541 MOGAT1Q96PD6 335 aa13.56□□□□□ -0.24
VAPA-201ENST00000340541 CCT8L2Q96SF2 557 aa13.56□□□□□ -0.24
VAPA-201ENST00000340541 PRSS27Q9BQR3 290 aa13.56□□□□□ -0.24
VAPA-201ENST00000340541 SLC7A10Q9NS82 523 aa13.56□□□□□ -0.24
VAPA-201ENST00000340541 SLC7A7Q9UM01 511 aa13.56□□□□□ -0.24
VAPA-201ENST00000340541 VPS13CQ709C8 3753 aa13.55□□□□□ -0.24
VAPA-201ENST00000340541 ALPK2Q86TB3 2170 aa13.55□□□□□ -0.24
VAPA-201ENST00000340541 LOC102725191A0A1B0GVB3 256 aa13.55□□□□□ -0.24
VAPA-201ENST00000340541 CXCR6O00574 342 aa13.55□□□□□ -0.24
VAPA-201ENST00000340541 SHOX2O60902 331 aaPredicted RBP13.55□□□□□ -0.24
VAPA-201ENST00000340541 HPRP00739 348 aa13.55□□□□□ -0.24
VAPA-201ENST00000340541 ITGA5P08648 1049 aa13.55□□□□□ -0.24
VAPA-201ENST00000340541 CBLP22681 906 aa13.55□□□□□ -0.24
VAPA-201ENST00000340541 OR1E2P47887 323 aa13.55□□□□□ -0.24
VAPA-201ENST00000340541 SELENOWP63302 87 aa13.55□□□□□ -0.24
VAPA-201ENST00000340541 FAPQ12884 760 aa13.55□□□□□ -0.24
VAPA-201ENST00000340541 BEX5Q5H9J7 111 aa13.55□□□□□ -0.24
VAPA-201ENST00000340541 NHLRC1Q6VVB1 395 aa13.55□□□□□ -0.24
VAPA-201ENST00000340541 H1FNTQ75WM6 255 aaPredicted RBP13.55□□□□□ -0.24
VAPA-201ENST00000340541 WFDC8Q8IUA0 241 aa13.55□□□□□ -0.24
VAPA-201ENST00000340541 KRTAP1-3Q8IUG1 177 aa13.55□□□□□ -0.24
VAPA-201ENST00000340541 UBE2J2Q8N2K1 259 aa13.55□□□□□ -0.24
VAPA-201ENST00000340541 ADPRHL1Q8NDY3 354 aa13.55□□□□□ -0.24
VAPA-201ENST00000340541 LRRC37BQ96QE4 947 aa13.55□□□□□ -0.24
VAPA-201ENST00000340541 EPYCQ99645 322 aa13.55□□□□□ -0.24
VAPA-201ENST00000340541 ARL8BQ9NVJ2 186 aa13.55□□□□□ -0.24
VAPA-201ENST00000340541 ASB6Q9NWX5 421 aa13.55□□□□□ -0.24
VAPA-201ENST00000340541 B3GALT5Q9Y2C3 310 aa13.55□□□□□ -0.24
VAPA-201ENST00000340541 CADP27708 2225 aa13.55□□□□□ -0.24
VAPA-201ENST00000340541 MS4A18H0YCH9 400 aa13.54□□□□□ -0.24
VAPA-201ENST00000340541 TRAF3IP2O43734 574 aaPredicted RBP13.54□□□□□ -0.24
VAPA-201ENST00000340541 GTF2E2P29084 291 aaKnown RBP13.54□□□□□ -0.24
VAPA-201ENST00000340541 SELENOPP49908 381 aa13.54□□□□□ -0.24
VAPA-201ENST00000340541 MFSD13AQ14CX5 517 aa13.54□□□□□ -0.24
VAPA-201ENST00000340541 MS4A18Q3C1V0 323 aa13.54□□□□□ -0.24
VAPA-201ENST00000340541 DEF8Q6ZN54 512 aa13.54□□□□□ -0.24
VAPA-201ENST00000340541 VTCN1Q7Z7D3 282 aa13.54□□□□□ -0.24
VAPA-201ENST00000340541 SCAIQ8N9R8 606 aa13.54□□□□□ -0.24
VAPA-201ENST00000340541 HSD17B8Q92506 261 aa13.54□□□□□ -0.24
VAPA-201ENST00000340541 MPP4Q96JB8 637 aa13.54□□□□□ -0.24
VAPA-201ENST00000340541 OXGR1Q96P68 337 aa13.54□□□□□ -0.24
VAPA-201ENST00000340541 USB1Q9BQ65 265 aaKnown RBP13.54□□□□□ -0.24
VAPA-201ENST00000340541 TMEM204Q9BSN7 226 aa13.54□□□□□ -0.24
VAPA-201ENST00000340541 AMBRA1Q9C0C7 1298 aa13.54□□□□□ -0.24
VAPA-201ENST00000340541 SLCO5A1Q9H2Y9 848 aa13.54□□□□□ -0.24
VAPA-201ENST00000340541 SPAG4Q9NPE6 437 aa13.54□□□□□ -0.24
VAPA-201ENST00000340541 TAS2R16Q9NYV7 291 aa13.54□□□□□ -0.24
VAPA-201ENST00000340541 CORINQ9Y5Q5 1042 aa13.54□□□□□ -0.24
VAPA-201ENST00000340541 OR5H1A6NKK0 313 aa13.53□□□□□ -0.24
VAPA-201ENST00000340541 NDUFAB1O14561 156 aa13.53□□□□□ -0.24
VAPA-201ENST00000340541 SMPD2O60906 423 aa13.53□□□□□ -0.24
VAPA-201ENST00000340541 RAD51DO75771 328 aa13.53□□□□□ -0.24
VAPA-201ENST00000340541 DCTN3O75935 186 aa13.53□□□□□ -0.24
VAPA-201ENST00000340541 ZNF432O94892 652 aa13.53□□□□□ -0.24
VAPA-201ENST00000340541 OR5F1O95221 314 aa13.53□□□□□ -0.24
VAPA-201ENST00000340541 FAM107AO95990 144 aa13.53□□□□□ -0.24
VAPA-201ENST00000340541 MT-ATP6P00846 226 aa13.53□□□□□ -0.24
VAPA-201ENST00000340541 GGT1P19440 569 aa13.53□□□□□ -0.24
VAPA-201ENST00000340541 LGALS3BPQ08380 585 aa13.53□□□□□ -0.24
VAPA-201ENST00000340541 PIN1Q13526 163 aaPredicted RBP13.53□□□□□ -0.24
VAPA-201ENST00000340541 GABRA6Q16445 453 aa13.53□□□□□ -0.24
VAPA-201ENST00000340541 ACKR1Q16570 336 aa13.53□□□□□ -0.24
VAPA-201ENST00000340541 ZNF74Q16587 644 aa13.53□□□□□ -0.24
VAPA-201ENST00000340541 TIMM23BQ5SRD1 257 aa13.53□□□□□ -0.24
VAPA-201ENST00000340541 CLEC9AQ6UXN8 241 aa13.53□□□□□ -0.24
VAPA-201ENST00000340541 CBLL1Q75N03 491 aa13.53□□□□□ -0.24
VAPA-201ENST00000340541 LINGO2Q7L985 606 aa13.53□□□□□ -0.24
VAPA-201ENST00000340541 NKAIN4Q8IVV8 208 aa13.53□□□□□ -0.24
VAPA-201ENST00000340541 PLPPR2Q96GM1 343 aa13.53□□□□□ -0.24
VAPA-201ENST00000340541 TPD52L3Q96J77 140 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms