RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 POU4F3Q15319 338 aa13.48□□□□□ -0.25
UBE3B-201ENST00000340074 ZNF74Q16587 644 aa13.48□□□□□ -0.25
UBE3B-201ENST00000340074 MS4A18Q3C1V0 323 aa13.48□□□□□ -0.25
UBE3B-201ENST00000340074 FBXW9Q5XUX1 488 aa13.48□□□□□ -0.25
UBE3B-201ENST00000340074 C22orf34Q6ZV56 151 aa13.48□□□□□ -0.25
UBE3B-201ENST00000340074 TSEN54Q7Z6J9 526 aaKnown RBP13.48□□□□□ -0.25
UBE3B-201ENST00000340074 EPHX4Q8IUS5 362 aa13.48□□□□□ -0.25
UBE3B-201ENST00000340074 UBE2J2Q8N2K1 259 aa13.48□□□□□ -0.25
UBE3B-201ENST00000340074 ADPRHL1Q8NDY3 354 aa13.48□□□□□ -0.25
UBE3B-201ENST00000340074 PFN4Q8NHR9 129 aa13.48□□□□□ -0.25
UBE3B-201ENST00000340074 TMEM239Q8WW34 195 aa13.48□□□□□ -0.25
UBE3B-201ENST00000340074 PYURFQ96I23 114 aa13.48□□□□□ -0.25
UBE3B-201ENST00000340074 DACH2Q96NX9 599 aa13.48□□□□□ -0.25
UBE3B-201ENST00000340074 OXGR1Q96P68 337 aa13.48□□□□□ -0.25
UBE3B-201ENST00000340074 MED18Q9BUE0 208 aa13.48□□□□□ -0.25
UBE3B-201ENST00000340074 FNDC11Q9BVV2 318 aa13.48□□□□□ -0.25
UBE3B-201ENST00000340074 ASPNQ9BXN1 380 aa13.48□□□□□ -0.25
UBE3B-201ENST00000340074 PARPBPQ9NWS1 579 aa13.48□□□□□ -0.25
UBE3B-201ENST00000340074 PRPF19Q9UMS4 504 aaKnown RBP13.48□□□□□ -0.25
UBE3B-201ENST00000340074 ENPP4Q9Y6X5 453 aa13.48□□□□□ -0.25
UBE3B-201ENST00000340074 PRSS23O95084 383 aa13.47□□□□□ -0.25
UBE3B-201ENST00000340074 CNOT4O95628 575 aaKnown RBP13.47□□□□□ -0.25
UBE3B-201ENST00000340074 HPRP00739 348 aa13.47□□□□□ -0.25
UBE3B-201ENST00000340074 MT-ND1P03886 318 aa13.47□□□□□ -0.25
UBE3B-201ENST00000340074 ZNF43P17038 809 aa13.47□□□□□ -0.25
UBE3B-201ENST00000340074 PSMB1P20618 241 aaKnown RBP13.47□□□□□ -0.25
UBE3B-201ENST00000340074 IGHV1-2P23083 117 aa13.47□□□□□ -0.25
UBE3B-201ENST00000340074 ITGADQ13349 1161 aa13.47□□□□□ -0.25
UBE3B-201ENST00000340074 PMS2P3Q13401 168 aa13.47□□□□□ -0.25
UBE3B-201ENST00000340074 P2RY6Q15077 328 aa13.47□□□□□ -0.25
UBE3B-201ENST00000340074 SFRP5Q5T4F7 317 aa13.47□□□□□ -0.25
UBE3B-201ENST00000340074 AAED1Q7RTV5 226 aa13.47□□□□□ -0.25
UBE3B-201ENST00000340074 SLC46A3Q7Z3Q1 461 aa13.47□□□□□ -0.25
UBE3B-201ENST00000340074 OFCC1Q8IZS5 231 aa13.47□□□□□ -0.25
UBE3B-201ENST00000340074 LRRC17Q8N6Y2 441 aa13.47□□□□□ -0.25
UBE3B-201ENST00000340074 OR5J2Q8NH18 312 aa13.47□□□□□ -0.25
UBE3B-201ENST00000340074 CLPTM1LQ96KA5 538 aa13.47□□□□□ -0.25
UBE3B-201ENST00000340074 HS6ST2Q96MM7 605 aa13.47□□□□□ -0.25
UBE3B-201ENST00000340074 THTPAQ9BU02 230 aa13.47□□□□□ -0.25
UBE3B-201ENST00000340074 HDHD5Q9BXW7 423 aa13.47□□□□□ -0.25
UBE3B-201ENST00000340074 ACTR6Q9GZN1 396 aa13.47□□□□□ -0.25
UBE3B-201ENST00000340074 FKRPQ9H9S5 495 aa13.47□□□□□ -0.25
UBE3B-201ENST00000340074 MCCC2Q9HCC0 563 aa13.47□□□□□ -0.25
UBE3B-201ENST00000340074 NANSQ9NR45 359 aa13.47□□□□□ -0.25
UBE3B-201ENST00000340074 MAN2C1Q9NTJ4 1040 aa13.47□□□□□ -0.25
UBE3B-201ENST00000340074 C20orf141Q9NUB4 165 aa13.47□□□□□ -0.25
UBE3B-201ENST00000340074 GPR52Q9Y2T5 361 aa13.47□□□□□ -0.25
UBE3B-201ENST00000340074 MED31Q9Y3C7 131 aa13.47□□□□□ -0.25
UBE3B-201ENST00000340074 ABCA4P78363 2273 aa13.47□□□□□ -0.25
UBE3B-201ENST00000340074 LOC102725191A0A1B0GVB3 256 aa13.47□□□□□ -0.25
UBE3B-201ENST00000340074 A6NNC1 897 aa13.47□□□□□ -0.25
UBE3B-201ENST00000340074 ENO4A6NNW6 628 aa13.47□□□□□ -0.25
UBE3B-201ENST00000340074 hCG_2039718K7EN88 272 aa13.47□□□□□ -0.25
UBE3B-201ENST00000340074 PLPP3O14495 311 aa13.47□□□□□ -0.25
UBE3B-201ENST00000340074 PIP5K1CO60331 668 aa13.47□□□□□ -0.25
UBE3B-201ENST00000340074 LYZL6O75951 148 aa13.47□□□□□ -0.25
UBE3B-201ENST00000340074 UMPSP11172 480 aa13.47□□□□□ -0.25
UBE3B-201ENST00000340074 HLA-DOBP13765 273 aa13.47□□□□□ -0.25
UBE3B-201ENST00000340074 AHCYP23526 432 aa13.47□□□□□ -0.25
UBE3B-201ENST00000340074 SELENOPP49908 381 aa13.47□□□□□ -0.25
UBE3B-201ENST00000340074 CLDN17P56750 224 aa13.47□□□□□ -0.25
UBE3B-201ENST00000340074 VLDLRP98155 873 aa13.47□□□□□ -0.25
UBE3B-201ENST00000340074 FAPQ12884 760 aa13.47□□□□□ -0.25
UBE3B-201ENST00000340074 C1DQ13901 141 aaKnown RBP13.47□□□□□ -0.25
UBE3B-201ENST00000340074 DAZAP2Q15038 168 aaPredicted RBP13.47□□□□□ -0.25
UBE3B-201ENST00000340074 TSPO2Q5TGU0 170 aa13.47□□□□□ -0.25
UBE3B-201ENST00000340074 CYP2R1Q6VVX0 501 aa13.47□□□□□ -0.25
UBE3B-201ENST00000340074 CYP4Z1Q86W10 505 aa13.47□□□□□ -0.25
UBE3B-201ENST00000340074 KISS1RQ969F8 398 aaPredicted RBP13.47□□□□□ -0.25
UBE3B-201ENST00000340074 ZC3HAV1LQ96H79 300 aaKnown RBP13.47□□□□□ -0.25
UBE3B-201ENST00000340074 C7orf34Q96L11 122 aa13.47□□□□□ -0.25
UBE3B-201ENST00000340074 SLC7A10Q9NS82 523 aa13.47□□□□□ -0.25
UBE3B-201ENST00000340074 ASB6Q9NWX5 421 aa13.47□□□□□ -0.25
UBE3B-201ENST00000340074 NDUFAF4Q9P032 175 aa13.47□□□□□ -0.25
UBE3B-201ENST00000340074 ACTR3BQ9P1U1 418 aa13.47□□□□□ -0.25
UBE3B-201ENST00000340074 UPB1Q9UBR1 384 aa13.47□□□□□ -0.25
UBE3B-201ENST00000340074 MALT1Q9UDY8 824 aa13.47□□□□□ -0.25
UBE3B-201ENST00000340074 C11orf98E9PRG8 122 aa13.46□□□□□ -0.26
UBE3B-201ENST00000340074 CASKO14936 926 aa13.46□□□□□ -0.26
UBE3B-201ENST00000340074 GYG2O15488 501 aa13.46□□□□□ -0.26
UBE3B-201ENST00000340074 DIRAS1O95057 198 aa13.46□□□□□ -0.26
UBE3B-201ENST00000340074 SEMG1P04279 462 aa13.46□□□□□ -0.26
UBE3B-201ENST00000340074 ASAH2BP0C7U1 165 aa13.46□□□□□ -0.26
UBE3B-201ENST00000340074 ADORA3P0DMS8 318 aa13.46□□□□□ -0.26
UBE3B-201ENST00000340074 COX5AP20674 150 aa13.46□□□□□ -0.26
UBE3B-201ENST00000340074 ATP6V1B2P21281 511 aa13.46□□□□□ -0.26
UBE3B-201ENST00000340074 IL32P24001 234 aa13.46□□□□□ -0.26
UBE3B-201ENST00000340074 LSM11P83369 360 aaKnown RBP eCLIP13.46□□□□□ -0.26
UBE3B-201ENST00000340074 MS4A2Q01362 244 aa13.46□□□□□ -0.26
UBE3B-201ENST00000340074 PUDPQ08623 228 aa13.46□□□□□ -0.26
UBE3B-201ENST00000340074 TRIM25Q14258 630 aaKnown RBP13.46□□□□□ -0.26
UBE3B-201ENST00000340074 TRAM2Q15035 370 aa13.46□□□□□ -0.26
UBE3B-201ENST00000340074 NIPAL3Q6P499 406 aa13.46□□□□□ -0.26
UBE3B-201ENST00000340074 BHLHA15Q7RTS1 189 aaPredicted RBP13.46□□□□□ -0.26
UBE3B-201ENST00000340074 TMEM200AQ86VY9 491 aa13.46□□□□□ -0.26
UBE3B-201ENST00000340074 UEVLDQ8IX04 471 aa13.46□□□□□ -0.26
UBE3B-201ENST00000340074 STEAP2Q8NFT2 490 aa13.46□□□□□ -0.26
UBE3B-201ENST00000340074 S100PBPQ96BU1 408 aa13.46□□□□□ -0.26
UBE3B-201ENST00000340074 SLC7A6OSQ96CW6 309 aaPredicted RBP13.46□□□□□ -0.26
UBE3B-201ENST00000340074 SLCO5A1Q9H2Y9 848 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms