RNA–Protein interactions for RNA: ENST00000339950.4

USP1-201, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP1, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-201ENST00000339950 SLC2A1P11166 492 aa10.97□□□□□ -0.65
USP1-201ENST00000339950 RNH1P13489 461 aaKnown RBP10.97□□□□□ -0.65
USP1-201ENST00000339950 GUCA2AQ02747 115 aa10.97□□□□□ -0.65
USP1-201ENST00000339950 AADACL4Q5VUY2 407 aa10.97□□□□□ -0.65
USP1-201ENST00000339950 POGLUT1Q8NBL1 392 aa10.97□□□□□ -0.65
USP1-201ENST00000339950 TSLPQ969D9 159 aa10.97□□□□□ -0.65
USP1-201ENST00000339950 TMEM106AQ96A25 262 aa10.97□□□□□ -0.65
USP1-201ENST00000339950 GPER1Q99527 375 aa10.97□□□□□ -0.65
USP1-201ENST00000339950 HDAC8Q9BY41 377 aa10.97□□□□□ -0.65
USP1-201ENST00000339950 KIR3DX1Q9H7L2 352 aa10.97□□□□□ -0.65
USP1-201ENST00000339950 CGGBP1Q9UFW8 167 aaPredicted RBP10.97□□□□□ -0.65
USP1-201ENST00000339950 FBXL2Q9UKC9 423 aa10.97□□□□□ -0.65
USP1-201ENST00000339950 TTC28Q96AY4 2481 aa10.97□□□□□ -0.65
USP1-201ENST00000339950 SCN4AP35499 1836 aa10.97□□□□□ -0.65
USP1-201ENST00000339950 ZNF879B4DU55 563 aa10.97□□□□□ -0.65
USP1-201ENST00000339950 TMEM150CB9EJG8 249 aa10.97□□□□□ -0.65
USP1-201ENST00000339950 SLC16A7O60669 478 aa10.97□□□□□ -0.65
USP1-201ENST00000339950 DPM1O60762 260 aa10.97□□□□□ -0.65
USP1-201ENST00000339950 ZNF780AO75290 641 aaPredicted RBP10.97□□□□□ -0.65
USP1-201ENST00000339950 ITGA10O75578 1167 aa10.97□□□□□ -0.65
USP1-201ENST00000339950 ZGLP1P0C6A0 271 aa10.97□□□□□ -0.65
USP1-201ENST00000339950 LIMS1P48059 325 aa10.97□□□□□ -0.65
USP1-201ENST00000339950 GZMKP49863 264 aa10.97□□□□□ -0.65
USP1-201ENST00000339950 HBMQ6B0K9 141 aa10.97□□□□□ -0.65
USP1-201ENST00000339950 CORO6Q6QEF8 472 aa10.97□□□□□ -0.65
USP1-201ENST00000339950 MED25Q71SY5 747 aa10.97□□□□□ -0.65
USP1-201ENST00000339950 MARCH3Q86UD3 253 aa10.97□□□□□ -0.65
USP1-201ENST00000339950 FCAMRQ8WWV6 532 aa10.97□□□□□ -0.65
USP1-201ENST00000339950 ALG12Q9BV10 488 aa10.97□□□□□ -0.65
USP1-201ENST00000339950 MEPEQ9NQ76 525 aaPredicted RBP10.97□□□□□ -0.65
USP1-201ENST00000339950 MED11Q9P086 117 aa10.97□□□□□ -0.65
USP1-201ENST00000339950 COPZ2Q9P299 210 aa10.97□□□□□ -0.65
USP1-201ENST00000339950 FBXL21Q9UKT6 434 aa10.97□□□□□ -0.65
USP1-201ENST00000339950 MDC1Q14676 2089 aaKnown RBP10.97□□□□□ -0.65
USP1-201ENST00000339950 CAMK2BQ13554 666 aa10.97□□□□□ -0.65
USP1-201ENST00000339950 C17orf107Q6ZR85 190 aa10.97□□□□□ -0.65
USP1-201ENST00000339950 LRRC28Q86X40 367 aaPredicted RBP10.97□□□□□ -0.65
USP1-201ENST00000339950 PLCZ1Q86YW0 608 aa10.97□□□□□ -0.65
USP1-201ENST00000339950 ARMC10Q8N2F6 343 aa10.97□□□□□ -0.65
USP1-201ENST00000339950 DNAJA4Q8WW22 397 aaPredicted RBP10.97□□□□□ -0.65
USP1-201ENST00000339950 MOAP1Q96BY2 351 aa10.97□□□□□ -0.65
USP1-201ENST00000339950 COX14Q96I36 57 aa10.97□□□□□ -0.65
USP1-201ENST00000339950 MRGPRX1Q96LB2 322 aa10.97□□□□□ -0.65
USP1-201ENST00000339950 LINC00615Q96LM1 132 aaPredicted RBP10.97□□□□□ -0.65
USP1-201ENST00000339950 TIMM29Q9BSF4 260 aa10.97□□□□□ -0.65
USP1-201ENST00000339950 COMMD4Q9H0A8 199 aa10.97□□□□□ -0.65
USP1-201ENST00000339950 RANBP3Q9H6Z4 567 aaPredicted RBP10.97□□□□□ -0.65
USP1-201ENST00000339950 TREM1Q9NP99 234 aa10.97□□□□□ -0.65
USP1-201ENST00000339950 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.97□□□□□ -0.65
USP1-201ENST00000339950 IL20Q9NYY1 176 aa10.97□□□□□ -0.65
USP1-201ENST00000339950 MBD2Q9UBB5 411 aa10.97□□□□□ -0.65
USP1-201ENST00000339950 SLC22A13Q9Y226 551 aa10.97□□□□□ -0.65
USP1-201ENST00000339950 CACNA1DQ01668 2161 aa10.96□□□□□ -0.65
USP1-201ENST00000339950 A0A1B0GVI7 797 aa10.96□□□□□ -0.65
USP1-201ENST00000339950 FITM1A5D6W6 292 aa10.96□□□□□ -0.65
USP1-201ENST00000339950 SHISA8B8ZZ34 492 aa10.96□□□□□ -0.65
USP1-201ENST00000339950 M0QYG6 137 aa10.96□□□□□ -0.65
USP1-201ENST00000339950 GMDSO60547 372 aa10.96□□□□□ -0.65
USP1-201ENST00000339950 AGR2O95994 175 aa10.96□□□□□ -0.65
USP1-201ENST00000339950 WNT1P04628 370 aa10.96□□□□□ -0.65
USP1-201ENST00000339950 PRKAR1BP31321 381 aa10.96□□□□□ -0.65
USP1-201ENST00000339950 TOR2AQ5JU69 321 aa10.96□□□□□ -0.65
USP1-201ENST00000339950 B3GNTL1Q67FW5 361 aaPredicted RBP10.96□□□□□ -0.65
USP1-201ENST00000339950 OR5M1Q8NGP8 315 aa10.96□□□□□ -0.65
USP1-201ENST00000339950 OR10AC1Q8NH08 325 aa10.96□□□□□ -0.65
USP1-201ENST00000339950 EMC6Q9BV81 110 aa10.96□□□□□ -0.65
USP1-201ENST00000339950 TEX101Q9BY14 249 aa10.96□□□□□ -0.65
USP1-201ENST00000339950 KCNE5Q9UJ90 142 aa10.96□□□□□ -0.65
USP1-201ENST00000339950 CTHP32929 405 aa10.96□□□□□ -0.65
USP1-201ENST00000339950 NFATC4Q14934 902 aa10.96□□□□□ -0.65
USP1-201ENST00000339950 GLYR1Q49A26 553 aaPredicted RBP10.96□□□□□ -0.65
USP1-201ENST00000339950 KLHL26Q53HC5 615 aa10.96□□□□□ -0.65
USP1-201ENST00000339950 LIPNQ5VXI9 398 aa10.96□□□□□ -0.65
USP1-201ENST00000339950 PYHIN1Q6K0P9 492 aa10.96□□□□□ -0.65
USP1-201ENST00000339950 GPR155Q7Z3F1 870 aa10.96□□□□□ -0.65
USP1-201ENST00000339950 GRAMD2AQ8IUY3 354 aa10.96□□□□□ -0.65
USP1-201ENST00000339950 GPALPP1Q8IXQ4 340 aa10.96□□□□□ -0.65
USP1-201ENST00000339950 PM20D2Q8IYS1 436 aa10.96□□□□□ -0.65
USP1-201ENST00000339950 CMTM4Q8IZR5 234 aa10.96□□□□□ -0.65
USP1-201ENST00000339950 TEX19Q8NA77 164 aa10.96□□□□□ -0.65
USP1-201ENST00000339950 PMM1Q92871 262 aa10.96□□□□□ -0.65
USP1-201ENST00000339950 CPNE2Q96FN4 548 aaPredicted RBP10.96□□□□□ -0.65
USP1-201ENST00000339950 SLC6A7Q99884 636 aa10.96□□□□□ -0.65
USP1-201ENST00000339950 ZNF471Q9BX82 626 aaPredicted RBP10.96□□□□□ -0.65
USP1-201ENST00000339950 GPN1Q9HCN4 374 aaPredicted RBP10.96□□□□□ -0.65
USP1-201ENST00000339950 NPAP1Q9NZP6 1156 aa10.96□□□□□ -0.65
USP1-201ENST00000339950 TESQ9UGI8 421 aaKnown RBP10.96□□□□□ -0.65
USP1-201ENST00000339950 ATPIF1Q9UII2 106 aa10.96□□□□□ -0.65
USP1-201ENST00000339950 TRAPPC4Q9Y296 219 aa10.96□□□□□ -0.65
USP1-201ENST00000339950 TSPAN11A1L157 253 aa10.96□□□□□ -0.66
USP1-201ENST00000339950 POU3F3P20264 500 aaPredicted RBP10.96□□□□□ -0.66
USP1-201ENST00000339950 RAD52P43351 418 aa10.96□□□□□ -0.66
USP1-201ENST00000339950 VASNQ6EMK4 673 aa10.96□□□□□ -0.66
USP1-201ENST00000339950 ARHGAP11AQ6P4F7 1023 aa10.96□□□□□ -0.66
USP1-201ENST00000339950 NR2C2APQ86WQ0 139 aa10.96□□□□□ -0.66
USP1-201ENST00000339950 ZNF101Q8IZC7 436 aa10.96□□□□□ -0.66
USP1-201ENST00000339950 ZNF248Q8NDW4 579 aa10.96□□□□□ -0.66
USP1-201ENST00000339950 OR5AK2Q8NH90 309 aa10.96□□□□□ -0.66
USP1-201ENST00000339950 WDR34Q96EX3 536 aa10.96□□□□□ -0.66
USP1-201ENST00000339950 ADAM29Q9UKF5 820 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms