RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 LMF1Q96S06 567 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 OCEL1Q9H607 264 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 SPTA1P02549 2419 aa5.78□□□□□ -1.48
PRKDC-202ENST00000338368 ZMAT1Q5H9K5 638 aa5.78□□□□□ -1.48
PRKDC-202ENST00000338368 LIPNQ5VXI9 398 aa5.78□□□□□ -1.48
PRKDC-202ENST00000338368 NCCRP1Q6ZVX7 275 aaPredicted RBP5.78□□□□□ -1.48
PRKDC-202ENST00000338368 ASCC1Q8N9N2 400 aaKnown RBP5.78□□□□□ -1.48
PRKDC-202ENST00000338368 NAXEQ8NCW5 288 aa5.78□□□□□ -1.48
PRKDC-202ENST00000338368 RASD2Q96D21 266 aa5.78□□□□□ -1.48
PRKDC-202ENST00000338368 SACM1LQ9NTJ5 587 aa5.78□□□□□ -1.48
PRKDC-202ENST00000338368 HHLA2Q9UM44 414 aa5.78□□□□□ -1.48
PRKDC-202ENST00000338368 NPFFR2Q9Y5X5 522 aa5.78□□□□□ -1.48
PRKDC-202ENST00000338368 ERGP11308 486 aa5.78□□□□□ -1.48
PRKDC-202ENST00000338368 ABHD17BQ5VST6 288 aa5.78□□□□□ -1.48
PRKDC-202ENST00000338368 PRAMEF17Q5VTA0 474 aa5.78□□□□□ -1.48
PRKDC-202ENST00000338368 SLC41A2Q96JW4 573 aa5.78□□□□□ -1.48
PRKDC-202ENST00000338368 TAS2R8Q9NYW2 309 aa5.78□□□□□ -1.48
PRKDC-202ENST00000338368 ZNF281Q9Y2X9 895 aa5.78□□□□□ -1.48
PRKDC-202ENST00000338368 IGHV5-51A0A0C4DH38 117 aa5.78□□□□□ -1.48
PRKDC-202ENST00000338368 PIAS2O75928 621 aa5.78□□□□□ -1.48
PRKDC-202ENST00000338368 DIO1P49895 249 aa5.78□□□□□ -1.48
PRKDC-202ENST00000338368 CCDC74AQ96AQ1 378 aa5.78□□□□□ -1.48
PRKDC-202ENST00000338368 ISYNA1Q9NPH2 558 aa5.78□□□□□ -1.48
PRKDC-202ENST00000338368 MEPEQ9NQ76 525 aaPredicted RBP5.78□□□□□ -1.48
PRKDC-202ENST00000338368 FARSAQ9Y285 508 aaKnown RBP5.78□□□□□ -1.48
PRKDC-202ENST00000338368 A0A1W2PS29 197 aa5.78□□□□□ -1.48
PRKDC-202ENST00000338368 SUSD5O60279 629 aa5.78□□□□□ -1.48
PRKDC-202ENST00000338368 ERP29P30040 261 aaKnown RBP5.78□□□□□ -1.48
PRKDC-202ENST00000338368 PRICKLE4Q2TBC4 344 aa5.78□□□□□ -1.48
PRKDC-202ENST00000338368 VASNQ6EMK4 673 aa5.78□□□□□ -1.48
PRKDC-202ENST00000338368 MTFR2Q6P444 385 aa5.78□□□□□ -1.48
PRKDC-202ENST00000338368 LRRC28Q86X40 367 aaPredicted RBP5.78□□□□□ -1.48
PRKDC-202ENST00000338368 BCORP1Q8N888 145 aa5.78□□□□□ -1.48
PRKDC-202ENST00000338368 ASB17Q8WXJ9 295 aa5.78□□□□□ -1.48
PRKDC-202ENST00000338368 TSLPQ969D9 159 aa5.78□□□□□ -1.48
PRKDC-202ENST00000338368 A8MVM7 634 aa5.78□□□□□ -1.48
PRKDC-202ENST00000338368 SURF4O15260 269 aa5.78□□□□□ -1.48
PRKDC-202ENST00000338368 GNG2P59768 71 aa5.78□□□□□ -1.48
PRKDC-202ENST00000338368 RBPJQ06330 500 aa5.78□□□□□ -1.48
PRKDC-202ENST00000338368 SCGB2A2Q13296 93 aa5.78□□□□□ -1.48
PRKDC-202ENST00000338368 SLC25A25Q6KCM7 469 aa5.78□□□□□ -1.48
PRKDC-202ENST00000338368 SFXN4Q6P4A7 337 aa5.78□□□□□ -1.48
PRKDC-202ENST00000338368 NUDT22Q9BRQ3 303 aa5.78□□□□□ -1.48
PRKDC-202ENST00000338368 WDR76Q9H967 626 aa5.78□□□□□ -1.48
PRKDC-202ENST00000338368 RABL2AQ9UBK7 228 aaPredicted RBP5.78□□□□□ -1.48
PRKDC-202ENST00000338368 RABL2BQ9UNT1 228 aa5.78□□□□□ -1.48
PRKDC-202ENST00000338368 CEP250Q9BV73 2442 aa5.78□□□□□ -1.48
PRKDC-202ENST00000338368 C5orf51A6NDU8 294 aa5.78□□□□□ -1.48
PRKDC-202ENST00000338368 PEBP1P30086 187 aaKnown RBP5.78□□□□□ -1.48
PRKDC-202ENST00000338368 MZT1Q08AG7 82 aa5.78□□□□□ -1.48
PRKDC-202ENST00000338368 MELKQ14680 651 aa5.78□□□□□ -1.48
PRKDC-202ENST00000338368 MEP1BQ16820 701 aa5.78□□□□□ -1.48
PRKDC-202ENST00000338368 BCL2L15Q5TBC7 163 aa5.78□□□□□ -1.48
PRKDC-202ENST00000338368 TMEM71Q6P5X7 295 aa5.78□□□□□ -1.48
PRKDC-202ENST00000338368 SLC35D2Q76EJ3 337 aa5.78□□□□□ -1.48
PRKDC-202ENST00000338368 TMEM106AQ96A25 262 aa5.78□□□□□ -1.48
PRKDC-202ENST00000338368 COPZ2Q9P299 210 aa5.78□□□□□ -1.48
PRKDC-202ENST00000338368 CDK5Q00535 292 aa5.78□□□□□ -1.48
PRKDC-202ENST00000338368 C5orf46Q6UWT4 87 aa5.78□□□□□ -1.48
PRKDC-202ENST00000338368 KDM8Q8N371 416 aa5.78□□□□□ -1.48
PRKDC-202ENST00000338368 BRIX1Q8TDN6 353 aaKnown RBP5.78□□□□□ -1.48
PRKDC-202ENST00000338368 ELOVL3Q9HB03 270 aa5.78□□□□□ -1.48
PRKDC-202ENST00000338368 OSGIN1Q9UJX0 560 aa5.78□□□□□ -1.48
PRKDC-202ENST00000338368 TOXO94900 526 aa5.78□□□□□ -1.48
PRKDC-202ENST00000338368 ZNF81P51508 661 aa5.78□□□□□ -1.48
PRKDC-202ENST00000338368 SLC22A10Q63ZE4 541 aa5.78□□□□□ -1.48
PRKDC-202ENST00000338368 HBMQ6B0K9 141 aa5.78□□□□□ -1.48
PRKDC-202ENST00000338368 OR13C3Q8NGS6 347 aa5.78□□□□□ -1.48
PRKDC-202ENST00000338368 CREB3L1Q96BA8 519 aa5.78□□□□□ -1.48
PRKDC-202ENST00000338368 SCGB3A2Q96PL1 93 aa5.78□□□□□ -1.48
PRKDC-202ENST00000338368 MNTQ99583 582 aa5.78□□□□□ -1.48
PRKDC-202ENST00000338368 PCED1AQ9H1Q7 454 aa5.78□□□□□ -1.48
PRKDC-202ENST00000338368 CLEC1BQ9P126 229 aa5.78□□□□□ -1.48
PRKDC-202ENST00000338368 SLC6A14Q9UN76 642 aa5.78□□□□□ -1.48
PRKDC-202ENST00000338368 ZSWIM8A7E2V4 1837 aa5.78□□□□□ -1.48
PRKDC-202ENST00000338368 GLCEO94923 617 aa5.78□□□□□ -1.48
PRKDC-202ENST00000338368 AP2S1P53680 142 aaPredicted RBP5.78□□□□□ -1.48
PRKDC-202ENST00000338368 GALEQ14376 348 aa5.78□□□□□ -1.48
PRKDC-202ENST00000338368 METAP1DQ6UB28 335 aaPredicted RBP5.78□□□□□ -1.48
PRKDC-202ENST00000338368 FCRLAQ7L513 359 aa5.78□□□□□ -1.48
PRKDC-202ENST00000338368 VASH1Q7L8A9 365 aaPredicted RBP5.78□□□□□ -1.48
PRKDC-202ENST00000338368 FTMTQ8N4E7 242 aa5.78□□□□□ -1.48
PRKDC-202ENST00000338368 PHYHIPQ92561 330 aa5.78□□□□□ -1.48
PRKDC-202ENST00000338368 ZNF681Q96N22 645 aa5.78□□□□□ -1.48
PRKDC-202ENST00000338368 WNT16Q9UBV4 365 aa5.78□□□□□ -1.48
PRKDC-202ENST00000338368 HMX3A6NHT5 357 aa5.78□□□□□ -1.48
PRKDC-202ENST00000338368 MYF5P13349 255 aa5.78□□□□□ -1.48
PRKDC-202ENST00000338368 C3P1Q6ZMU1 363 aa5.78□□□□□ -1.48
PRKDC-202ENST00000338368 ARIH2OSQ8N7S6 290 aa5.78□□□□□ -1.48
PRKDC-202ENST00000338368 SMRP1Q8NCR6 262 aa5.78□□□□□ -1.48
PRKDC-202ENST00000338368 SYNPRQ8TBG9 265 aa5.78□□□□□ -1.48
PRKDC-202ENST00000338368 OR10A4Q9H209 315 aa5.78□□□□□ -1.48
PRKDC-202ENST00000338368 PCDHGA3Q9Y5H0 932 aa5.78□□□□□ -1.48
PRKDC-202ENST00000338368 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 TRIM64CA6NLI5 447 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 ZNF593O00488 134 aaPredicted RBP5.77□□□□□ -1.49
PRKDC-202ENST00000338368 SPI1P17947 270 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 ARPC4P59998 168 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 TMPRSS11FQ6ZWK6 438 aa5.77□□□□□ -1.49
PRKDC-202ENST00000338368 APH1BQ8WW43 257 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms