RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 SLC38A2Q96QD8 506 aa9.31□□□□□ -0.92
CAPN3-202ENST00000337571 OR52B2Q96RD2 323 aa9.31□□□□□ -0.92
CAPN3-202ENST00000337571 VRK1Q99986 396 aaPredicted RBP9.31□□□□□ -0.92
CAPN3-202ENST00000337571 SPATA5L1Q9BVQ7 753 aa9.31□□□□□ -0.92
CAPN3-202ENST00000337571 BEX2Q9BXY8 128 aa9.31□□□□□ -0.92
CAPN3-202ENST00000337571 BCL2L10Q9HD36 194 aa9.31□□□□□ -0.92
CAPN3-202ENST00000337571 FBXO9Q9UK97 447 aaPredicted RBP9.31□□□□□ -0.92
CAPN3-202ENST00000337571 SLC13A4Q9UKG4 626 aa9.31□□□□□ -0.92
CAPN3-202ENST00000337571 CDC42EP3Q9UKI2 254 aa9.31□□□□□ -0.92
CAPN3-202ENST00000337571 PCDHB14Q9Y5E9 798 aa9.31□□□□□ -0.92
CAPN3-202ENST00000337571 A0A096LPE4 126 aa9.3□□□□□ -0.92
CAPN3-202ENST00000337571 IGHV1-18A0A0C4DH31 117 aa9.3□□□□□ -0.92
CAPN3-202ENST00000337571 A0A1W2PPZ6 126 aa9.3□□□□□ -0.92
CAPN3-202ENST00000337571 RNF212BA8MTL3 300 aa9.3□□□□□ -0.92
CAPN3-202ENST00000337571 DYNC1I1O14576 645 aa9.3□□□□□ -0.92
CAPN3-202ENST00000337571 POLR3GO15318 223 aaPredicted RBP9.3□□□□□ -0.92
CAPN3-202ENST00000337571 FRS3O43559 492 aa9.3□□□□□ -0.92
CAPN3-202ENST00000337571 AKAP8O43823 692 aaKnown RBP9.3□□□□□ -0.92
CAPN3-202ENST00000337571 SLC43A1O75387 559 aa9.3□□□□□ -0.92
CAPN3-202ENST00000337571 ERCC1P07992 297 aaPredicted RBP9.3□□□□□ -0.92
CAPN3-202ENST00000337571 PNMTP11086 282 aa9.3□□□□□ -0.92
CAPN3-202ENST00000337571 H2AFXP16104 143 aaPredicted RBP9.3□□□□□ -0.92
CAPN3-202ENST00000337571 USF1P22415 310 aaPredicted RBP9.3□□□□□ -0.92
CAPN3-202ENST00000337571 PPIBP23284 216 aaKnown RBP9.3□□□□□ -0.92
CAPN3-202ENST00000337571 PDLIM4P50479 330 aa9.3□□□□□ -0.92
CAPN3-202ENST00000337571 CLDN17P56750 224 aa9.3□□□□□ -0.92
CAPN3-202ENST00000337571 VLDLRP98155 873 aa9.3□□□□□ -0.92
CAPN3-202ENST00000337571 ROR2Q01974 943 aaKnown RBP9.3□□□□□ -0.92
CAPN3-202ENST00000337571 FADDQ13158 208 aa9.3□□□□□ -0.92
CAPN3-202ENST00000337571 GTDC1Q4AE62 458 aa9.3□□□□□ -0.92
CAPN3-202ENST00000337571 C4orf48Q5BLP8 95 aa9.3□□□□□ -0.92
CAPN3-202ENST00000337571 C6orf52Q5T4I8 152 aa9.3□□□□□ -0.92
CAPN3-202ENST00000337571 SLC2A7Q6PXP3 512 aa9.3□□□□□ -0.92
CAPN3-202ENST00000337571 VHLLQ6RSH7 139 aa9.3□□□□□ -0.92
CAPN3-202ENST00000337571 EPGNQ6UW88 154 aa9.3□□□□□ -0.92
CAPN3-202ENST00000337571 SLC46A3Q7Z3Q1 461 aa9.3□□□□□ -0.92
CAPN3-202ENST00000337571 NET1Q7Z628 596 aaPredicted RBP9.3□□□□□ -0.92
CAPN3-202ENST00000337571 EPHX4Q8IUS5 362 aa9.3□□□□□ -0.92
CAPN3-202ENST00000337571 KDM8Q8N371 416 aa9.3□□□□□ -0.92
CAPN3-202ENST00000337571 OR9I1Q8NGQ6 314 aa9.3□□□□□ -0.92
CAPN3-202ENST00000337571 C10orf105Q8TEF2 133 aa9.3□□□□□ -0.92
CAPN3-202ENST00000337571 DNAJA4Q8WW22 397 aaPredicted RBP9.3□□□□□ -0.92
CAPN3-202ENST00000337571 GTF2H4Q92759 462 aa9.3□□□□□ -0.92
CAPN3-202ENST00000337571 BCL2L2Q92843 193 aaPredicted RBP9.3□□□□□ -0.92
CAPN3-202ENST00000337571 MAL2Q969L2 176 aa9.3□□□□□ -0.92
CAPN3-202ENST00000337571 OXGR1Q96P68 337 aa9.3□□□□□ -0.92
CAPN3-202ENST00000337571 ALKBH3Q96Q83 286 aaPredicted RBP9.3□□□□□ -0.92
CAPN3-202ENST00000337571 KATNB1Q9BVA0 655 aa9.3□□□□□ -0.92
CAPN3-202ENST00000337571 LINC00470Q9BZP3 86 aa9.3□□□□□ -0.92
CAPN3-202ENST00000337571 PAIP1Q9H074 479 aaKnown RBP9.3□□□□□ -0.92
CAPN3-202ENST00000337571 A4GALTQ9NPC4 353 aa9.3□□□□□ -0.92
CAPN3-202ENST00000337571 USH1CQ9Y6N9 552 aa9.3□□□□□ -0.92
CAPN3-202ENST00000337571 ARPC4-TTLL3A0A0A6YYG9 625 aa9.29□□□□□ -0.92
CAPN3-202ENST00000337571 EVPLLA8MZ36 301 aa9.29□□□□□ -0.92
CAPN3-202ENST00000337571 TMEM229AB2RXF0 380 aa9.29□□□□□ -0.92
CAPN3-202ENST00000337571 B9A039 149 aa9.29□□□□□ -0.92
CAPN3-202ENST00000337571 NDUFS8O00217 210 aa9.29□□□□□ -0.92
CAPN3-202ENST00000337571 NR5A2O00482 541 aa9.29□□□□□ -0.92
CAPN3-202ENST00000337571 AIM2O14862 343 aa9.29□□□□□ -0.92
CAPN3-202ENST00000337571 NPIPB7O75200 414 aa9.29□□□□□ -0.92
CAPN3-202ENST00000337571 UPK3AO75631 287 aa9.29□□□□□ -0.92
CAPN3-202ENST00000337571 SERPINB7O75635 380 aa9.29□□□□□ -0.92
CAPN3-202ENST00000337571 TGDSO95455 350 aa9.29□□□□□ -0.92
CAPN3-202ENST00000337571 FAM157CP0CG43 387 aa9.29□□□□□ -0.92
CAPN3-202ENST00000337571 ETS2P15036 469 aa9.29□□□□□ -0.92
CAPN3-202ENST00000337571 NQO1P15559 274 aaKnown RBP9.29□□□□□ -0.92
CAPN3-202ENST00000337571 PRKAR1BP31321 381 aa9.29□□□□□ -0.92
CAPN3-202ENST00000337571 NCALDP61601 193 aa9.29□□□□□ -0.92
CAPN3-202ENST00000337571 HOXC5Q00444 222 aa9.29□□□□□ -0.92
CAPN3-202ENST00000337571 LGALS3BPQ08380 585 aa9.29□□□□□ -0.92
CAPN3-202ENST00000337571 CARTPTQ16568 116 aa9.29□□□□□ -0.92
CAPN3-202ENST00000337571 SWI5Q1ZZU3 235 aa9.29□□□□□ -0.92
CAPN3-202ENST00000337571 C3orf36Q3SXR2 165 aa9.29□□□□□ -0.92
CAPN3-202ENST00000337571 ALG10BQ5I7T1 473 aa9.29□□□□□ -0.92
CAPN3-202ENST00000337571 REEP3Q6NUK4 255 aa9.29□□□□□ -0.92
CAPN3-202ENST00000337571 ULK3Q6PHR2 472 aa9.29□□□□□ -0.92
CAPN3-202ENST00000337571 ZNF540Q8NDQ6 660 aa9.29□□□□□ -0.92
CAPN3-202ENST00000337571 PIK3C3Q8NEB9 887 aa9.29□□□□□ -0.92
CAPN3-202ENST00000337571 BHLHE22Q8NFJ8 381 aaPredicted RBP9.29□□□□□ -0.92
CAPN3-202ENST00000337571 OR4F15Q8NGB8 312 aa9.29□□□□□ -0.92
CAPN3-202ENST00000337571 MAGEE2Q8TD90 523 aaPredicted RBP9.29□□□□□ -0.92
CAPN3-202ENST00000337571 TMEM158Q8WZ71 300 aa9.29□□□□□ -0.92
CAPN3-202ENST00000337571 SLC38A4Q969I6 547 aa9.29□□□□□ -0.92
CAPN3-202ENST00000337571 ZNF607Q96SK3 696 aa9.29□□□□□ -0.92
CAPN3-202ENST00000337571 PIMREGQ9BSJ6 248 aa9.29□□□□□ -0.92
CAPN3-202ENST00000337571 SHARPINQ9H0F6 387 aa9.29□□□□□ -0.92
CAPN3-202ENST00000337571 RAB1BQ9H0U4 201 aa9.29□□□□□ -0.92
CAPN3-202ENST00000337571 C12orf10Q9HB07 376 aa9.29□□□□□ -0.92
CAPN3-202ENST00000337571 TMEM27Q9HBJ8 222 aa9.29□□□□□ -0.92
CAPN3-202ENST00000337571 TMBIM4Q9HC24 238 aa9.29□□□□□ -0.92
CAPN3-202ENST00000337571 TCF7L2Q9NQB0 619 aa9.29□□□□□ -0.92
CAPN3-202ENST00000337571 CA10Q9NS85 328 aa9.29□□□□□ -0.92
CAPN3-202ENST00000337571 LPAR3Q9UBY5 353 aa9.29□□□□□ -0.92
CAPN3-202ENST00000337571 CORO2BQ9UQ03 480 aa9.29□□□□□ -0.92
CAPN3-202ENST00000337571 RCE1Q9Y256 329 aa9.29□□□□□ -0.92
CAPN3-202ENST00000337571 MXRA5Q9NR99 2828 aa9.29□□□□□ -0.92
CAPN3-202ENST00000337571 DNHD1Q96M86 4753 aa9.29□□□□□ -0.92
CAPN3-202ENST00000337571 TRAV36DV7A0A075B6V5 113 aa9.28□□□□□ -0.92
CAPN3-202ENST00000337571 LOC390937A0A1W2PQ73 354 aa9.28□□□□□ -0.92
CAPN3-202ENST00000337571 PRORSD1PA6NEY8 169 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms