RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 CTRB2Q6GPI1 263 aa9.13□□□□□ -0.95
COL4A6-201ENST00000334504 IL34Q6ZMJ4 242 aa9.13□□□□□ -0.95
COL4A6-201ENST00000334504 GCNT2Q8N0V5 402 aa9.13□□□□□ -0.95
COL4A6-201ENST00000334504 OR5L2Q8NGL0 311 aa9.13□□□□□ -0.95
COL4A6-201ENST00000334504 ZNF251Q9BRH9 671 aa9.13□□□□□ -0.95
COL4A6-201ENST00000334504 CHRDQ9H2X0 955 aa9.13□□□□□ -0.95
COL4A6-201ENST00000334504 CLCF1Q9UBD9 225 aa9.13□□□□□ -0.95
COL4A6-201ENST00000334504 INSL5Q9Y5Q6 135 aa9.13□□□□□ -0.95
COL4A6-201ENST00000334504 SLIT3O75094 1523 aa9.13□□□□□ -0.95
COL4A6-201ENST00000334504 ARSAP15289 507 aa9.13□□□□□ -0.95
COL4A6-201ENST00000334504 ZNF26P17031 533 aaPredicted RBP9.13□□□□□ -0.95
COL4A6-201ENST00000334504 CD80P33681 288 aa9.13□□□□□ -0.95
COL4A6-201ENST00000334504 RPS19P39019 145 aaKnown RBP9.13□□□□□ -0.95
COL4A6-201ENST00000334504 CCR9P51686 369 aa9.13□□□□□ -0.95
COL4A6-201ENST00000334504 EPHA4P54764 986 aa9.13□□□□□ -0.95
COL4A6-201ENST00000334504 GDPD3Q7L5L3 318 aa9.13□□□□□ -0.95
COL4A6-201ENST00000334504 ZNF561Q8N587 486 aa9.13□□□□□ -0.95
COL4A6-201ENST00000334504 ANGPTL6Q8NI99 470 aa9.13□□□□□ -0.95
COL4A6-201ENST00000334504 KHSRPQ92945 711 aaKnown RBP eCLIP9.13□□□□□ -0.95
COL4A6-201ENST00000334504 KLHDC7BQ96G42 594 aa9.13□□□□□ -0.95
COL4A6-201ENST00000334504 C20orf27Q9GZN8 174 aa9.13□□□□□ -0.95
COL4A6-201ENST00000334504 TMPRSS5Q9H3S3 457 aa9.13□□□□□ -0.95
COL4A6-201ENST00000334504 DIMT1Q9UNQ2 313 aaKnown RBP9.13□□□□□ -0.95
COL4A6-201ENST00000334504 CSAG2Q9Y5P2 127 aa9.13□□□□□ -0.95
COL4A6-201ENST00000334504 GPRIN2O60269 458 aa9.13□□□□□ -0.95
COL4A6-201ENST00000334504 ADAM23O75077 832 aa9.13□□□□□ -0.95
COL4A6-201ENST00000334504 CBX7O95931 251 aa9.13□□□□□ -0.95
COL4A6-201ENST00000334504 TMEM11P17152 192 aa9.13□□□□□ -0.95
COL4A6-201ENST00000334504 TM4SF1P30408 202 aa9.13□□□□□ -0.95
COL4A6-201ENST00000334504 SNCAP37840 140 aa9.13□□□□□ -0.95
COL4A6-201ENST00000334504 ELLP55199 621 aaPredicted RBP9.13□□□□□ -0.95
COL4A6-201ENST00000334504 SYT6Q5T7P8 510 aaPredicted RBP9.13□□□□□ -0.95
COL4A6-201ENST00000334504 MRPL10Q7Z7H8 261 aaKnown RBP9.13□□□□□ -0.95
COL4A6-201ENST00000334504 KLHDC8BQ8IXV7 354 aa9.13□□□□□ -0.95
COL4A6-201ENST00000334504 CLRN3Q8NCR9 226 aa9.13□□□□□ -0.95
COL4A6-201ENST00000334504 DCLRE1CQ96SD1 692 aaKnown RBP9.13□□□□□ -0.95
COL4A6-201ENST00000334504 NKX3-1Q99801 234 aaPredicted RBP9.13□□□□□ -0.95
COL4A6-201ENST00000334504 RTP3Q9BQQ7 232 aa9.13□□□□□ -0.95
COL4A6-201ENST00000334504 FAM234AQ9H0X4 552 aa9.13□□□□□ -0.95
COL4A6-201ENST00000334504 C12orf10Q9HB07 376 aa9.13□□□□□ -0.95
COL4A6-201ENST00000334504 IL26Q9NPH9 171 aa9.13□□□□□ -0.95
COL4A6-201ENST00000334504 CHRNA9Q9UGM1 479 aa9.13□□□□□ -0.95
COL4A6-201ENST00000334504 TRAPPC2LH3BP13 241 aa9.13□□□□□ -0.95
COL4A6-201ENST00000334504 NQO2P16083 231 aa9.13□□□□□ -0.95
COL4A6-201ENST00000334504 HNF1AP20823 631 aa9.13□□□□□ -0.95
COL4A6-201ENST00000334504 MRPL19P49406 292 aaKnown RBP9.13□□□□□ -0.95
COL4A6-201ENST00000334504 SIRPAP78324 504 aa9.13□□□□□ -0.95
COL4A6-201ENST00000334504 HENMT1Q5T8I9 393 aaKnown RBP9.13□□□□□ -0.95
COL4A6-201ENST00000334504 FAM160A2Q8N612 972 aaPredicted RBP9.13□□□□□ -0.95
COL4A6-201ENST00000334504 RELL2Q8NC24 303 aaPredicted RBP9.13□□□□□ -0.95
COL4A6-201ENST00000334504 ADAMTS18Q8TE60 1221 aa9.13□□□□□ -0.95
COL4A6-201ENST00000334504 WDR92Q96MX6 357 aa9.13□□□□□ -0.95
COL4A6-201ENST00000334504 TUBB1Q9H4B7 451 aa9.13□□□□□ -0.95
COL4A6-201ENST00000334504 MED9Q9NWA0 146 aa9.13□□□□□ -0.95
COL4A6-201ENST00000334504 DNAJB11Q9UBS4 358 aa9.13□□□□□ -0.95
COL4A6-201ENST00000334504 STEAP1Q9UHE8 339 aa9.13□□□□□ -0.95
COL4A6-201ENST00000334504 PHLPP1O60346 1717 aa9.13□□□□□ -0.95
COL4A6-201ENST00000334504 MYH10P35580 1976 aa9.13□□□□□ -0.95
COL4A6-201ENST00000334504 HSPB6O14558 160 aa9.13□□□□□ -0.95
COL4A6-201ENST00000334504 PAPLNO95428 1278 aa9.13□□□□□ -0.95
COL4A6-201ENST00000334504 SLC2A1P11166 492 aa9.13□□□□□ -0.95
COL4A6-201ENST00000334504 SLC11A1P49279 550 aa9.13□□□□□ -0.95
COL4A6-201ENST00000334504 RAB28P51157 221 aa9.13□□□□□ -0.95
COL4A6-201ENST00000334504 ELOCQ15369 112 aa9.13□□□□□ -0.95
COL4A6-201ENST00000334504 SYPL1Q16563 259 aa9.13□□□□□ -0.95
COL4A6-201ENST00000334504 TBPL2Q6SJ96 375 aa9.13□□□□□ -0.95
COL4A6-201ENST00000334504 KIAA0907Q7Z7F0 614 aaPredicted RBP9.13□□□□□ -0.95
COL4A6-201ENST00000334504 TVP23CQ96ET8 276 aa9.13□□□□□ -0.95
COL4A6-201ENST00000334504 RNF167Q9H6Y7 350 aa9.13□□□□□ -0.95
COL4A6-201ENST00000334504 SLC2A4RGQ9NR83 387 aa9.13□□□□□ -0.95
COL4A6-201ENST00000334504 OR14J1Q9UGF5 321 aa9.13□□□□□ -0.95
COL4A6-201ENST00000334504 VDAC3Q9Y277 283 aa9.13□□□□□ -0.95
COL4A6-201ENST00000334504 PRELID3BQ9Y3B1 194 aa9.13□□□□□ -0.95
COL4A6-201ENST00000334504 SPO11Q9Y5K1 396 aa9.13□□□□□ -0.95
COL4A6-201ENST00000334504 IGLON5A6NGN9 336 aa9.13□□□□□ -0.95
COL4A6-201ENST00000334504 TMEM212A6NML5 194 aa9.13□□□□□ -0.95
COL4A6-201ENST00000334504 SPINT3P49223 89 aa9.13□□□□□ -0.95
COL4A6-201ENST00000334504 TSPAN31Q12999 210 aa9.13□□□□□ -0.95
COL4A6-201ENST00000334504 NSDHLQ15738 373 aa9.13□□□□□ -0.95
COL4A6-201ENST00000334504 RBMXL3Q8N7X1 1067 aaKnown RBP9.13□□□□□ -0.95
COL4A6-201ENST00000334504 IRF7Q92985 503 aa9.13□□□□□ -0.95
COL4A6-201ENST00000334504 TSACCQ96A04 125 aaPredicted RBP9.13□□□□□ -0.95
COL4A6-201ENST00000334504 A0A0U1RQF3 1178 aa9.12□□□□□ -0.95
COL4A6-201ENST00000334504 A0A1W2PP55 124 aa9.12□□□□□ -0.95
COL4A6-201ENST00000334504 GJE1A6NN92 205 aa9.12□□□□□ -0.95
COL4A6-201ENST00000334504 RNGTTO60942 597 aaKnown RBP9.12□□□□□ -0.95
COL4A6-201ENST00000334504 ATP1B1P05026 303 aa9.12□□□□□ -0.95
COL4A6-201ENST00000334504 DPP4P27487 766 aa9.12□□□□□ -0.95
COL4A6-201ENST00000334504 OTX2P32243 289 aa9.12□□□□□ -0.95
COL4A6-201ENST00000334504 IDUAP35475 653 aa9.12□□□□□ -0.95
COL4A6-201ENST00000334504 NPY4RP50391 375 aa9.12□□□□□ -0.95
COL4A6-201ENST00000334504 ASAH1Q13510 395 aa9.12□□□□□ -0.95
COL4A6-201ENST00000334504 C1orf61Q13536 156 aa9.12□□□□□ -0.95
COL4A6-201ENST00000334504 CAMK2BQ13554 666 aa9.12□□□□□ -0.95
COL4A6-201ENST00000334504 LTC4SQ16873 150 aa9.12□□□□□ -0.95
COL4A6-201ENST00000334504 OR51S1Q8NGJ8 323 aa9.12□□□□□ -0.95
COL4A6-201ENST00000334504 OR6M1Q8NGM8 313 aa9.12□□□□□ -0.95
COL4A6-201ENST00000334504 GPR150Q8NGU9 434 aa9.12□□□□□ -0.95
COL4A6-201ENST00000334504 PPP1R35Q8TAP8 253 aa9.12□□□□□ -0.95
COL4A6-201ENST00000334504 PSMF1Q92530 271 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms