RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 HTR2AP28223 471 aa12.62□□□□□ -0.39
SYNE3-201ENST00000334258 PTH2RP49190 550 aa12.62□□□□□ -0.39
SYNE3-201ENST00000334258 ZNF136P52737 540 aa12.62□□□□□ -0.39
SYNE3-201ENST00000334258 ACTA2P62736 377 aa12.62□□□□□ -0.39
SYNE3-201ENST00000334258 ACTG2P63267 376 aa12.62□□□□□ -0.39
SYNE3-201ENST00000334258 HTRA4P83105 476 aaPredicted RBP12.62□□□□□ -0.39
SYNE3-201ENST00000334258 FLI1Q01543 452 aaPredicted RBP12.62□□□□□ -0.39
SYNE3-201ENST00000334258 SHHQ15465 462 aa12.62□□□□□ -0.39
SYNE3-201ENST00000334258 PDSS1Q5T2R2 415 aa12.62□□□□□ -0.39
SYNE3-201ENST00000334258 RPL13AP3Q6NVV1 102 aa12.62□□□□□ -0.39
SYNE3-201ENST00000334258 OR7G2Q8NG99 324 aa12.62□□□□□ -0.39
SYNE3-201ENST00000334258 ATOH1Q92858 354 aaPredicted RBP12.62□□□□□ -0.39
SYNE3-201ENST00000334258 PNPLA2Q96AD5 504 aa12.62□□□□□ -0.39
SYNE3-201ENST00000334258 RSPRY1Q96DX4 576 aa12.62□□□□□ -0.39
SYNE3-201ENST00000334258 CNN2Q99439 309 aaKnown RBP12.62□□□□□ -0.39
SYNE3-201ENST00000334258 MRPS30Q9NP92 439 aaKnown RBP12.62□□□□□ -0.39
SYNE3-201ENST00000334258 HEATR5BQ9P2D3 2071 aa12.62□□□□□ -0.39
SYNE3-201ENST00000334258 TBC1D3EA0A087X179 549 aa12.62□□□□□ -0.39
SYNE3-201ENST00000334258 CXorf51AA0A1B0GTR3 108 aa12.62□□□□□ -0.39
SYNE3-201ENST00000334258 OR6C65A6NJZ3 312 aa12.62□□□□□ -0.39
SYNE3-201ENST00000334258 IDSB3KWA1 339 aa12.62□□□□□ -0.39
SYNE3-201ENST00000334258 DNASE2O00115 360 aaPredicted RBP12.62□□□□□ -0.39
SYNE3-201ENST00000334258 RBBP9O75884 186 aa12.62□□□□□ -0.39
SYNE3-201ENST00000334258 IL5P05113 134 aa12.62□□□□□ -0.39
SYNE3-201ENST00000334258 PCCBP05166 539 aa12.62□□□□□ -0.39
SYNE3-201ENST00000334258 VSIG10L2P0DP72 767 aa12.62□□□□□ -0.39
SYNE3-201ENST00000334258 DUSP5Q16690 384 aa12.62□□□□□ -0.39
SYNE3-201ENST00000334258 DCAF12L2Q5VW00 463 aa12.62□□□□□ -0.39
SYNE3-201ENST00000334258 OR7E24Q6IFN5 339 aa12.62□□□□□ -0.39
SYNE3-201ENST00000334258 MFSD12Q6NUT3 480 aa12.62□□□□□ -0.39
SYNE3-201ENST00000334258 RPL22L1Q6P5R6 122 aaKnown RBP12.62□□□□□ -0.39
SYNE3-201ENST00000334258 GPR174Q9BXC1 333 aa12.62□□□□□ -0.39
SYNE3-201ENST00000334258 ZCCHC4Q9H5U6 513 aa12.62□□□□□ -0.39
SYNE3-201ENST00000334258 PLEKHA1Q9HB21 404 aa12.62□□□□□ -0.39
SYNE3-201ENST00000334258 PRDM7Q9NQW5 492 aa12.62□□□□□ -0.39
SYNE3-201ENST00000334258 A0A1B0GVT2 93 aa12.61□□□□□ -0.39
SYNE3-201ENST00000334258 MEIS3P1A6NDR6 274 aa12.61□□□□□ -0.39
SYNE3-201ENST00000334258 HMSDA8MTL9 139 aa12.61□□□□□ -0.39
SYNE3-201ENST00000334258 OGG1O15527 345 aa12.61□□□□□ -0.39
SYNE3-201ENST00000334258 PRAMEF2O60811 474 aa12.61□□□□□ -0.39
SYNE3-201ENST00000334258 NDUFS1P28331 727 aa12.61□□□□□ -0.39
SYNE3-201ENST00000334258 RPS15P62841 145 aaKnown RBP12.61□□□□□ -0.39
SYNE3-201ENST00000334258 ID2Q02363 134 aa12.61□□□□□ -0.39
SYNE3-201ENST00000334258 POU4F2Q12837 409 aa12.61□□□□□ -0.39
SYNE3-201ENST00000334258 PON3Q15166 354 aa12.61□□□□□ -0.39
SYNE3-201ENST00000334258 TSSK4Q6SA08 328 aa12.61□□□□□ -0.39
SYNE3-201ENST00000334258 SLC35F2Q8IXU6 374 aa12.61□□□□□ -0.39
SYNE3-201ENST00000334258 ZNF559Q9BR84 538 aa12.61□□□□□ -0.39
SYNE3-201ENST00000334258 FKRPQ9H9S5 495 aa12.61□□□□□ -0.39
SYNE3-201ENST00000334258 ZNF223Q9UK11 482 aaPredicted RBP12.61□□□□□ -0.39
SYNE3-201ENST00000334258 APOC1P02654 83 aa12.61□□□□□ -0.39
SYNE3-201ENST00000334258 ACHEP22303 614 aa12.61□□□□□ -0.39
SYNE3-201ENST00000334258 RPL4P36578 427 aaKnown RBP12.61□□□□□ -0.39
SYNE3-201ENST00000334258 RPS11P62280 158 aaKnown RBP eCLIP12.61□□□□□ -0.39
SYNE3-201ENST00000334258 AMZ1Q400G9 498 aa12.61□□□□□ -0.39
SYNE3-201ENST00000334258 NUDT18Q6ZVK8 323 aa12.61□□□□□ -0.39
SYNE3-201ENST00000334258 RNF113BQ8IZP6 322 aaKnown RBP12.61□□□□□ -0.39
SYNE3-201ENST00000334258 OR2AK2Q8NG84 335 aa12.61□□□□□ -0.39
SYNE3-201ENST00000334258 OR8S1Q8NH09 359 aa12.61□□□□□ -0.39
SYNE3-201ENST00000334258 NANPQ8TBE9 248 aa12.61□□□□□ -0.39
SYNE3-201ENST00000334258 SLITRK2Q9H156 845 aa12.61□□□□□ -0.39
SYNE3-201ENST00000334258 CDV3Q9UKY7 258 aaKnown RBP12.61□□□□□ -0.39
SYNE3-201ENST00000334258 FOXJ3Q9UPW0 622 aa12.61□□□□□ -0.39
SYNE3-201ENST00000334258 IGKV1-8A0A0C4DH67 115 aa12.61□□□□□ -0.39
SYNE3-201ENST00000334258 PEX12O00623 359 aa12.61□□□□□ -0.39
SYNE3-201ENST00000334258 PIN1P1O15428 100 aa12.61□□□□□ -0.39
SYNE3-201ENST00000334258 CDC123O75794 336 aaPredicted RBP12.61□□□□□ -0.39
SYNE3-201ENST00000334258 PRNPP04156 253 aa12.61□□□□□ -0.39
SYNE3-201ENST00000334258 OR2T7P0C7T2 308 aa12.61□□□□□ -0.39
SYNE3-201ENST00000334258 TAS2R20P59543 309 aa12.61□□□□□ -0.39
SYNE3-201ENST00000334258 RBMS2Q15434 407 aaKnown RBP12.61□□□□□ -0.39
SYNE3-201ENST00000334258 TMEM88Q6PEY1 159 aa12.61□□□□□ -0.39
SYNE3-201ENST00000334258 FIGNL1Q6PIW4 674 aa12.61□□□□□ -0.39
SYNE3-201ENST00000334258 ZC3H14Q6PJT7 736 aaKnown RBP12.61□□□□□ -0.39
SYNE3-201ENST00000334258 TMPRSS12Q86WS5 348 aa12.61□□□□□ -0.39
SYNE3-201ENST00000334258 MUC20Q8N307 709 aaPredicted RBP12.61□□□□□ -0.39
SYNE3-201ENST00000334258 EID2Q8N6I1 236 aa12.61□□□□□ -0.39
SYNE3-201ENST00000334258 ZNF565Q8N9K5 539 aa12.61□□□□□ -0.39
SYNE3-201ENST00000334258 OR2L5Q8NG80 312 aa12.61□□□□□ -0.39
SYNE3-201ENST00000334258 OR2T27Q8NH04 317 aa12.61□□□□□ -0.39
SYNE3-201ENST00000334258 HSPA12BQ96MM6 686 aa12.61□□□□□ -0.39
SYNE3-201ENST00000334258 NKX6-2Q9C056 277 aaPredicted RBP12.61□□□□□ -0.39
SYNE3-201ENST00000334258 EXO5Q9H790 373 aa12.61□□□□□ -0.39
SYNE3-201ENST00000334258 TMEM185BQ9H7F4 350 aa12.61□□□□□ -0.39
SYNE3-201ENST00000334258 TMEM27Q9HBJ8 222 aa12.61□□□□□ -0.39
SYNE3-201ENST00000334258 OR5V1Q9UGF6 321 aa12.61□□□□□ -0.39
SYNE3-201ENST00000334258 FAM171A2A8MVW0 826 aa12.6□□□□□ -0.39
SYNE3-201ENST00000334258 DPP4P27487 766 aa12.6□□□□□ -0.39
SYNE3-201ENST00000334258 ITPKBP27987 946 aa12.6□□□□□ -0.39
SYNE3-201ENST00000334258 SLC6A6P31641 620 aa12.6□□□□□ -0.39
SYNE3-201ENST00000334258 MAT1AQ00266 395 aaKnown RBP12.6□□□□□ -0.39
SYNE3-201ENST00000334258 GPM6BQ13491 265 aa12.6□□□□□ -0.39
SYNE3-201ENST00000334258 PWWP2BQ6NUJ5 590 aa12.6□□□□□ -0.39
SYNE3-201ENST00000334258 MS4A4EQ96PG1 132 aa12.6□□□□□ -0.39
SYNE3-201ENST00000334258 SDF2Q99470 211 aa12.6□□□□□ -0.39
SYNE3-201ENST00000334258 TSPAN10Q9H1Z9 355 aaPredicted RBP12.6□□□□□ -0.39
SYNE3-201ENST00000334258 FBXL3Q9UKT7 428 aa12.6□□□□□ -0.39
SYNE3-201ENST00000334258 SCN3AQ9NY46 2000 aa12.6□□□□□ -0.39
SYNE3-201ENST00000334258 PTPRSQ13332 1948 aa12.6□□□□□ -0.39
SYNE3-201ENST00000334258 TBC1D3KA0A087X1G2 549 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms